FFCP PHASE1:Hg19::chr7:107301447..107301451,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5172 | |EntrezGene=5172 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8818 | |HGNC=8818 | ||
|TSSclassifier=strong | |||
|UniProt=C9JQG1 | |UniProt=C9JQG1 | ||
|association_with_transcript=0bp_to_ENST00000440056_5end | |association_with_transcript=0bp_to_ENST00000440056_5end | ||
|cluster_id=chr7:107301447..107301451,+ | |||
|coexpression_cluster_id=C113 | |coexpression_cluster_id=C113 | ||
|description=CAGE_peak_23_at_SLC26A4_5end | |description=CAGE_peak_23_at_SLC26A4_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002564!2.32e-07!3 | |ontology_enrichment_celltype=CL:0002564!2.32e-07!3 | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007123;3.49e-79;5 | |ontology_enrichment_development_v019=UBERON:0007123;3.49e-79;5 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007190!5.62e-19!1;UBERON:0002046!1.05e-15!5;UBERON:0004117!1.05e-15!5;UBERON:0007689!1.05e-15!5;UBERON:0007123!1.05e-15!5;UBERON:0003091!1.05e-15!5;UBERON:0000200!7.33e-13!6;UBERON:0000341!2.27e-10!2;UBERON:0001954!2.72e-10!2;UBERON:0003022!2.72e-10!2;UBERON:0002421!2.72e-10!2;UBERON:0002600!2.72e-10!2;UBERON:0001871!5.06e-10!7;UBERON:0001869!4.82e-09!32;UBERON:0001893!1.52e-08!34;UBERON:0002619!1.11e-07!22;UBERON:0009722!1.20e-07!11;UBERON:0007690!1.20e-07!11;UBERON:0002242!2.32e-07!3;UBERON:0003068!2.32e-07!3;UBERON:0002328!2.32e-07!3;UBERON:0004880!2.32e-07!3;UBERON:0007023!2.62e-07!115;UBERON:0002771!2.63e-07!3;UBERON:0003056!2.71e-07!61;UBERON:0002780!3.65e-07!41;UBERON:0001890!3.65e-07!41;UBERON:0006240!3.65e-07!41;UBERON:0003080!5.29e-07!42;UBERON:0000956!7.41e-07!25;UBERON:0000203!7.41e-07!25 | |ontology_enrichment_uberon=UBERON:0007190!5.62e-19!1;UBERON:0002046!1.05e-15!5;UBERON:0004117!1.05e-15!5;UBERON:0007689!1.05e-15!5;UBERON:0007123!1.05e-15!5;UBERON:0003091!1.05e-15!5;UBERON:0000200!7.33e-13!6;UBERON:0000341!2.27e-10!2;UBERON:0001954!2.72e-10!2;UBERON:0003022!2.72e-10!2;UBERON:0002421!2.72e-10!2;UBERON:0002600!2.72e-10!2;UBERON:0001871!5.06e-10!7;UBERON:0001869!4.82e-09!32;UBERON:0001893!1.52e-08!34;UBERON:0002619!1.11e-07!22;UBERON:0009722!1.20e-07!11;UBERON:0007690!1.20e-07!11;UBERON:0002242!2.32e-07!3;UBERON:0003068!2.32e-07!3;UBERON:0002328!2.32e-07!3;UBERON:0004880!2.32e-07!3;UBERON:0007023!2.62e-07!115;UBERON:0002771!2.63e-07!3;UBERON:0003056!2.71e-07!61;UBERON:0002780!3.65e-07!41;UBERON:0001890!3.65e-07!41;UBERON:0006240!3.65e-07!41;UBERON:0003080!5.29e-07!42;UBERON:0000956!7.41e-07!25;UBERON:0000203!7.41e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0002046;3.49e-79;5!UBERON:0002368;1.70e-11;33 | |ontology_enrichment_uberon_v019=UBERON:0002046;3.49e-79;5!UBERON:0002368;1.70e-11;33 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002046,3.49e-79,5;UBERON:0004117,3.49e-79,5;UBERON:0007689,3.49e-79,5;UBERON:0007123,3.49e-79,5;UBERON:0003091,3.49e-79,5;UBERON:0009722,6.80e-37,11;UBERON:0007690,6.80e-37,11;UBERON:0008814,3.88e-23,18;UBERON:0002368,1.42e-12,35;UBERON:0000949,4.55e-10,45;UBERON:0003929,1.34e-08,54;UBERON:0002530,5.66e-08,59 | |||
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|short_description=p23@SLC26A4 | |short_description=p23@SLC26A4 | ||
}} | }} |
Latest revision as of 01:41, 25 September 2015
Short description: | p23@SLC26A4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_23_at_SLC26A4_5end |
Coexpression cluster: | C113_thyroid_throat_lung_lymph_small_colon_trachea |
Association with transcript: | 0bp_to_ENST00000440056_5end |
EntrezGene: | SLC26A4 |
HGNC: | 8818 |
UniProt: | C9JQG1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thyroid gland | 3.49e-79 | 5 |
pharyngeal pouch | 3.49e-79 | 5 |
thyroid diverticulum | 3.49e-79 | 5 |
pharyngeal pouch 2 | 3.49e-79 | 5 |
thyroid primordium | 3.49e-79 | 5 |
entire pharyngeal arch endoderm | 6.80e-37 | 11 |
early pharyngeal endoderm | 6.80e-37 | 11 |
pharyngeal arch system | 3.88e-23 | 18 |
endocrine gland | 1.42e-12 | 35 |
endocrine system | 4.55e-10 | 45 |
gut epithelium | 1.34e-08 | 54 |
gland | 5.66e-08 | 59 |