FFCP PHASE1:Hg19::chr22:44569031..44569036,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=64098 | |EntrezGene=64098 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=14654 | |HGNC=14654 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=Q9HBI0 | |UniProt=Q9HBI0 | ||
|association_with_transcript=195bp_to_ENST00000422871,NM_001137605,NR_024427,uc011aqe.1_5end | |association_with_transcript=195bp_to_ENST00000422871,NM_001137605,NR_024427,uc011aqe.1_5end | ||
|cluster_id=chr22:44569031..44569036,+ | |||
|coexpression_cluster_id=C298 | |coexpression_cluster_id=C298 | ||
|description=CAGE_peak_27_at_PARVG_5end | |description=CAGE_peak_27_at_PARVG_5end | ||
Latest revision as of 02:26, 25 September 2015
| Short description: | p27@PARVG |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_27_at_PARVG_5end |
| Coexpression cluster: | C298_small_optic_substantia_thalamus_diencephalon_globus_occipital |
| Association with transcript: | 195bp_to_ENST00000422871, NM_001137605, NR_024427, uc011aqe.1_5end |
| EntrezGene: | PARVG |
| HGNC: | 14654 |
| UniProt: | Q9HBI0 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p27@PARVG |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| uterine cervix | 4.27e-34 | 6 |
| neck of organ | 4.27e-34 | 6 |
| uterus | 6.74e-11 | 21 |
| embryonic uterus | 1.80e-10 | 22 |
| internal female genitalia | 1.80e-10 | 22 |
| internal genitalia | 2.15e-09 | 25 |
| female reproductive organ | 8.21e-07 | 37 |
| female reproductive system | 8.21e-07 | 37 |
Showing 1 to 8 of 8 entries
| Ontology term | p-value | n |
|---|---|---|
| cervical cancer | 1.48e-40 | 5 |
| female reproductive organ cancer | 8.32e-09 | 27 |
| reproductive organ cancer | 2.67e-08 | 29 |
Showing 1 to 3 of 3 entries
