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FFCP PHASE1:Hg19::chr7:107883711..107883718,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=supported 
|DPIdataset=robust
|EntrezGene=4897
|EntrezGene=4897
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding
|HGNC=7994
|HGNC=7994
|TSSclassifier=strong
|UniProt=C9JH43
|UniProt=C9JH43
|association_with_transcript=-27bp_to_ENST00000417701_5end
|association_with_transcript=-27bp_to_ENST00000417701_5end
|cluster_id=chr7:107883711..107883718,-
|coexpression_cluster_id=C445
|description=CAGE_peak_29_at_NRCAM_5end
|description=CAGE_peak_29_at_NRCAM_5end
|id=chr7:107883711..107883718,-
|id=chr7:107883711..107883718,-
|ontology_enrichment_celltype=CL:0000064!3.11e-27!3;CL:0005012!3.11e-27!3;CL:0000067!3.11e-27!3;CL:0002304!3.11e-27!3;CL:0000075!3.02e-07!27
|ontology_enrichment_celltype=CL:0000064!3.11e-27!3;CL:0005012!3.11e-27!3;CL:0000067!3.11e-27!3;CL:0002304!3.11e-27!3;CL:0000075!3.02e-07!27
|ontology_enrichment_celltype_v019=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_development_v019=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019=DOID:1324;5.55e-08;15!DOID:0050615;1.45e-07;16
|ontology_enrichment_disease_v019_2=DOID:1324,5.55e-08,15;DOID:0050615,1.45e-07,16
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|ontology_enrichment_uberon=UBERON:0001778!3.11e-27!3;UBERON:0001775!3.11e-27!3;UBERON:0001882!7.72e-21!1;UBERON:0005403!7.72e-21!1;UBERON:0002022!9.43e-21!1;UBERON:0000488!1.05e-20!4;UBERON:0003056!4.53e-20!61;UBERON:0003075!5.25e-18!86;UBERON:0007284!5.25e-18!86;UBERON:0002346!3.36e-17!90;UBERON:0007625!7.09e-17!11;UBERON:0002203!3.71e-14!6;UBERON:0001768!3.71e-14!6;UBERON:0001801!2.07e-13!14;UBERON:0001894!1.78e-12!7;UBERON:0006222!1.78e-12!7;UBERON:0000033!2.06e-12!123;UBERON:0001049!3.22e-12!57;UBERON:0005068!3.22e-12!57;UBERON:0006241!3.22e-12!57;UBERON:0007135!3.22e-12!57;UBERON:0002780!6.47e-12!41;UBERON:0001890!6.47e-12!41;UBERON:0006240!6.47e-12!41;UBERON:0000153!7.99e-12!129;UBERON:0007811!7.99e-12!129;UBERON:0002616!8.27e-12!59;UBERON:0003080!1.22e-11!42;UBERON:0001897!2.02e-11!2;UBERON:0000019!4.72e-10!19;UBERON:0000047!4.72e-10!19;UBERON:0004088!4.72e-10!19;UBERON:0003072!4.72e-10!19;UBERON:0003071!4.72e-10!19;UBERON:0004128!4.72e-10!19;UBERON:0000955!5.77e-10!69;UBERON:0006238!5.77e-10!69;UBERON:0000970!1.40e-09!20;UBERON:0002104!3.75e-09!21;UBERON:0001456!3.75e-09!21;UBERON:0004121!6.91e-09!169;UBERON:0000924!1.13e-08!173;UBERON:0006601!1.13e-08!173;UBERON:0000020!2.08e-08!23;UBERON:0001017!2.10e-08!82;UBERON:0002200!3.76e-08!11;UBERON:0006876!3.76e-08!11;UBERON:0001032!4.41e-08!24;UBERON:0004456!4.41e-08!24;UBERON:0005743!5.15e-08!86;UBERON:0001896!6.34e-08!3;UBERON:0005290!6.34e-08!3;UBERON:0010096!6.34e-08!3;UBERON:0000073!2.96e-07!94;UBERON:0001016!2.96e-07!94;UBERON:0005085!8.77e-07!29
|ontology_enrichment_uberon_v019=UBERON:0001897;4.52e-50;2!UBERON:0010225;4.52e-50;2!UBERON:0002784;7.14e-26;4!UBERON:0001894;1.91e-15;7
|ontology_enrichment_uberon_v019_2=UBERON:0001897,4.52e-50,2;UBERON:0010225,4.52e-50,2;UBERON:0002784,7.14e-26,4;UBERON:0001894,1.91e-15,7;UBERON:0006222,1.91e-15,7
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.472674085820339,0,0.175669571386252,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695582429850461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.937057782901357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.15912616383586,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.248385611765534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.48750831837634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0
|short_description=p29@NRCAM
|short_description=p29@NRCAM
}}
}}

Latest revision as of 02:38, 25 September 2015

Short description:p29@NRCAM
Species:Human (Homo sapiens)
DPI dataset: Robust
TSS-like-by-RIKEN-classifier(Yes/No): Yes
DHS support(Yes/No): Yes
Description: CAGE_peak_29_at_NRCAM_5end
Coexpression cluster:C445_lung_Lens_Ciliary_diencephalon_thalamus_bile_hepatoma
Association with transcript: -27bp_to_ENST00000417701_5end
EntrezGene:NRCAM
HGNC: 7994
UniProt: C9JH43
Genome view:ZENBU


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CAGE Expression




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  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data