FFCP PHASE1:Hg19::chr20:3148921..3148942,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9762 | |EntrezGene=9762 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=O60299 | |UniProt=O60299 | ||
|association_with_transcript=264bp_to_ENST00000329152,ENST00000337576,NM_014731,uc002wia.1_5end | |association_with_transcript=264bp_to_ENST00000329152,ENST00000337576,NM_014731,uc002wia.1_5end | ||
|cluster_id=chr20:3148921..3148942,- | |||
|coexpression_cluster_id=C70 | |||
|description=CAGE_peak_3_at_ProSAPiP1_5end | |description=CAGE_peak_3_at_ProSAPiP1_5end | ||
|id=chr20:3148921..3148942,- | |id=chr20:3148921..3148942,- | ||
|ontology_enrichment_celltype=CL:0002322!1.45e-09!5 | |ontology_enrichment_celltype=CL:0002322!1.45e-09!5 | ||
|ontology_enrichment_celltype_v019=CL:0000313;2.57e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000313,2.50e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0008801;2.09e-07;1!UBERON:0006298;2.22e-07;1!UBERON:0005754;2.98e-07;1!UBERON:0010226;8.47e-07;1!UBERON:0006242;8.47e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;2.70e-12;2!DOID:114;6.12e-12;2!DOID:2152;2.57e-07;1!DOID:3111;3.67e-07;1!DOID:3603;3.67e-07;1!DOID:178;8.47e-07;1!DOID:326;8.47e-07;1!DOID:3978;8.47e-07;1!DOID:3394;8.47e-07;1!DOID:5844;8.47e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.95e-12,2;DOID:114,5.19e-12,2;DOID:2152,2.50e-07,1;DOID:3111,3.78e-07,1;DOID:3603,3.78e-07,1;DOID:178,6.76e-07,1;DOID:326,6.76e-07,1;DOID:3978,6.76e-07,1;DOID:3394,6.76e-07,1;DOID:5844,6.76e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.31e-20!115;UBERON:0000466!2.01e-11!126;UBERON:0001007!1.30e-10!155;UBERON:0001555!1.30e-10!155;UBERON:0007026!1.30e-10!155;UBERON:0004119!5.09e-10!169;UBERON:0000925!5.09e-10!169;UBERON:0006595!5.09e-10!169;UBERON:0002294!6.99e-10!7;UBERON:0001173!6.99e-10!7;UBERON:0004912!6.99e-10!7;UBERON:0004921!8.21e-10!129;UBERON:0004185!8.21e-10!129;UBERON:0000464!2.36e-09!104;UBERON:0000077!3.66e-09!130;UBERON:0000481!1.29e-07!347;UBERON:0001048!2.27e-07!168;UBERON:0002110!9.97e-07!3;UBERON:0006242!9.97e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;4.13e-13;2!UBERON:0002294;1.00e-12;7!UBERON:0001173;1.00e-12;7!UBERON:0003127;6.12e-12;2!UBERON:0001044;1.31e-09;6!UBERON:0003293;1.31e-09;6!UBERON:0003294;1.31e-09;6!UBERON:0010047;1.31e-09;6!UBERON:0003408;1.31e-09;6!UBERON:0000167;1.31e-09;6!UBERON:0000058;4.09e-09;10!UBERON:0006947;1.54e-08;3!UBERON:0004054;1.54e-08;3!UBERON:0002110;3.01e-08;3!UBERON:0001831;2.09e-07;1!UBERON:0001567;2.09e-07;1!UBERON:0001736;2.22e-07;1!UBERON:0004911;2.57e-07;1!UBERON:0000998;2.98e-07;1!UBERON:0006868;2.98e-07;1!UBERON:0001041;7.22e-07;14!UBERON:0002084;8.47e-07;1!UBERON:0001000;8.47e-07;1!UBERON:0004913;8.47e-07;1!UBERON:0003703;8.47e-07;1!UBERON:0002082;8.47e-07;1!UBERON:0005352;8.47e-07;1!UBERON:0001174;8.47e-07;1!UBERON:0004914;8.47e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,4.14e-13,2;UBERON:0003127,2.64e-12,2;UBERON:0002294,6.44e-10,9;UBERON:0001173,6.44e-10,9;UBERON:0004912,6.44e-10,9;UBERON:0001044,1.31e-09,6;UBERON:0003293,1.31e-09,6;UBERON:0003294,1.31e-09,6;UBERON:0010047,1.31e-09,6;UBERON:0000167,1.31e-09,6;UBERON:0006947,1.28e-08,3;UBERON:0004054,1.28e-08,3;UBERON:0002110,4.05e-08,3;UBERON:0006242,4.05e-08,3;UBERON:0007023,5.78e-08,114;UBERON:0002553,1.08e-07,61;UBERON:0001831,2.09e-07,1;UBERON:0001567,2.09e-07,1;UBERON:0008801,2.09e-07,1;UBERON:0001736,2.22e-07,1;UBERON:0006298,2.22e-07,1;UBERON:0004911,2.50e-07,1;UBERON:0000058,2.91e-07,19;UBERON:0000998,2.99e-07,1;UBERON:0006868,2.99e-07,1;UBERON:0002084,4.51e-07,1;UBERON:0002082,4.51e-07,1;UBERON:0010226,4.51e-07,1;UBERON:0001000,6.38e-07,1;UBERON:0005352,6.38e-07,1;UBERON:0004913,8.02e-07,1;UBERON:0003703,8.02e-07,1;UBERON:0001174,8.02e-07,1;UBERON:0004914,8.02e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,2.09340350391728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,2.12047629314376,1.2781333715647,0.310983165046111,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.753150406214233,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,1.25966373927138,0,0,0,0.359473404589307,1.61119057208048,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979396848954886,0,0,0,0.530745387020035,0,0,0,0,0,0,0,0,0,0,1.57833761139756,1.20990716048664,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0.193978032976839,0,1.35588444468319,0,0,0,1.36885967914362,0.881747022766871,1.06726497369676,0,0,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,1.39775300349294,1.28767814440971,1.78537165953498,0.268733889946905,0,1.16495949527454,0.393915911536118,0.494495150286999,0.26961417541674,0,0,0,0,0.803765742325096,2.33817042215297,0.83088067605837,0,0,0,0,1.26089131678717,1.31136470337495,0,0,0.575745591958336,0.714695326373367,1.98627591109629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,1.28144895081234,0.628817220398664,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3244333569449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.225630985047772,0,6.25211208986474,0,0,1.33070477595341,0.135075169236789,0,0,0.0634158101939068,0,14.2547019382867,0,0,0,0,0,0.606965604236632,1.13831095675649,0.177404740325278,0,0,0,0,0,0,0.706437835654626,0,4.20408244970683,0.913158720509496,0,0,0.357382720883282,0,0,0,0,0,0,0,7.31386509994472,0,0,3.81048345171836,0,0,0,6.82318133966533,1.27595303699816,2.68219434960993,0,0,0,0,0,0,0,0.11294608203896,0,2.56636834063345,0.771741581079447,0.437119121007915,1.88126918544609,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8444199353271,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0.459474497674225,0.250707539292375,0.0757786982182394,0,0,0,0.852935927603924,0.23806443146374,0,0,0,0.891060215894309,0.808468755832877,0,0.342233301085281,0.0673520530145875,1.72133292942423,1.66330178273007,0.0814032686109745,0,0,0,0,0.244482888365733,0.406896178315738,0.665756774185513,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,2.09340350391728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.301150238155546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.851363990735132,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,2.12047629314376,1.2781333715647,0.310983165046111,0.504641701751257,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.368965315629341,0,0,0,0,0.185176890317059,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184161977871793,0,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.753150406214233,0,0,0,0,0,0,0,0.476463550915578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,1.25966373927138,0,0,0,0.359473404589307,1.61119057208048,0,0,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0.295547618953547,0,0,0,0.230850775511391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979396848954886,0,0,0,0.530745387020035,0,0,0,0,0,0,0,0,0,0,1.57833761139756,1.20990716048664,0,0,0,0,0,0,0,0,0.853828638089378,0,0,0,0,0.17472666824203,0.171986032471617,0,0,0,0.193978032976839,0,1.35588444468319,0,0,0,1.36885967914362,0.881747022766871,1.06726497369676,0,0,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,1.39775300349294,1.28767814440971,1.78537165953498,0.268733889946905,0,1.16495949527454,0.393915911536118,0.494495150286999,0.26961417541674,0,0,0,0,0.803765742325096,2.33817042215297,0.83088067605837,0,0,0,0,1.26089131678717,1.31136470337495,0,0,0.575745591958336,0.714695326373367,1.98627591109629,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,1.28144895081234,0.628817220398664,0.828478110694391,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3244333569449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.159633859057151,0.205116364240755,0,0.0691572524642179,0,0,0,0,0,0,0,0,0,0.225630985047772,0,6.25211208986474,0,0,1.33070477595341,0.135075169236789,0,0,0.0634158101939068,0,14.2547019382867,0,0,0,0,0,0.606965604236632,1.13831095675649,0.177404740325278,0,0,0,0,0,0,0.706437835654626,0,4.20408244970683,0.913158720509496,0,0,0.357382720883282,0,0,0,0,0,0,0,7.31386509994472,0,0,3.81048345171836,0,0,0,6.82318133966533,1.27595303699816,2.68219434960993,0,0,0,0,0,0,0,0.11294608203896,0,2.56636834063345,0.771741581079447,0.437119121007915,1.88126918544609,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8444199353271,0,0,0,0,0.5290268405154,0,0,0,0,0,0,0,0,0.459474497674225,0.250707539292375,0.0757786982182394,0,0,0,0.852935927603924,0.23806443146374,0,0,0,0.891060215894309,0.808468755832877,0,0.342233301085281,0.0673520530145875,1.72133292942423,1.66330178273007,0.0814032686109745,0,0,0,0,0.244482888365733,0.406896178315738,0.665756774185513,0.201273793591026,0 | ||
|short_description=p3@ProSAPiP1 | |short_description=p3@ProSAPiP1 | ||
}} | }} |
Latest revision as of 03:52, 25 September 2015
Short description: | p3@ProSAPiP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ProSAPiP1_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | 264bp_to_ENST00000329152, ENST00000337576, NM_014731, uc002wia.1_5end |
EntrezGene: | ProSAPiP1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 2.50e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 4.14e-13 | 2 |
open tracheal system trachea | 2.64e-12 | 2 |
biliary system | 6.44e-10 | 9 |
biliary tree | 6.44e-10 | 9 |
biliary bud | 6.44e-10 | 9 |
saliva-secreting gland | 1.31e-09 | 6 |
gland of oral region | 1.31e-09 | 6 |
gland of foregut | 1.31e-09 | 6 |
oral gland | 1.31e-09 | 6 |
oral cavity | 1.31e-09 | 6 |
male genital duct | 1.28e-08 | 3 |
internal male genitalia | 1.28e-08 | 3 |
gallbladder | 4.05e-08 | 3 |
gall bladder primordium | 4.05e-08 | 3 |
adult organism | 5.78e-08 | 114 |
anatomical cavity | 1.08e-07 | 61 |
parotid gland | 2.09e-07 | 1 |
cheek | 2.09e-07 | 1 |
parotid gland primordium | 2.09e-07 | 1 |
submandibular gland | 2.22e-07 | 1 |
submandibular gland primordium | 2.22e-07 | 1 |
epithelium of female gonad | 2.50e-07 | 1 |
duct | 2.91e-07 | 19 |
seminal vesicle | 2.99e-07 | 1 |
seminal fluid secreting gland | 2.99e-07 | 1 |
heart left ventricle | 4.51e-07 | 1 |
cardiac ventricle | 4.51e-07 | 1 |
future cardiac ventricle | 4.51e-07 | 1 |
vas deferens | 6.38e-07 | 1 |
spermatic cord | 6.38e-07 | 1 |
hepatopancreatic ampulla | 8.02e-07 | 1 |
extrahepatic bile duct | 8.02e-07 | 1 |
common bile duct | 8.02e-07 | 1 |
duodenal papilla | 8.02e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.95e-12 | 2 |
heart disease | 5.19e-12 | 2 |
ovary epithelial cancer | 2.50e-07 | 1 |
cystadenocarcinoma | 3.78e-07 | 1 |
mucinous cystadenocarcinoma | 3.78e-07 | 1 |
vascular disease | 6.76e-07 | 1 |
ischemia | 6.76e-07 | 1 |
extrinsic cardiomyopathy | 6.76e-07 | 1 |
myocardial ischemia | 6.76e-07 | 1 |
myocardial infarction | 6.76e-07 | 1 |