FFCP PHASE1:Hg19::chr20:3148921..3148942,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9762 | |EntrezGene=9762 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt=O60299 | |UniProt=O60299 | ||
|association_with_transcript=264bp_to_ENST00000329152,ENST00000337576,NM_014731,uc002wia.1_5end | |association_with_transcript=264bp_to_ENST00000329152,ENST00000337576,NM_014731,uc002wia.1_5end | ||
|cluster_id=chr20:3148921..3148942,- | |||
|coexpression_cluster_id=C70 | |coexpression_cluster_id=C70 | ||
|description=CAGE_peak_3_at_ProSAPiP1_5end | |description=CAGE_peak_3_at_ProSAPiP1_5end | ||
|id=chr20:3148921..3148942,- | |id=chr20:3148921..3148942,- | ||
|ontology_enrichment_celltype=CL:0000313;2.57e-07;1 | |ontology_enrichment_celltype=CL:0002322!1.45e-09!5 | ||
| | |ontology_enrichment_celltype_v019=CL:0000313;2.57e-07;1 | ||
|ontology_enrichment_disease=DOID:3493;2.70e-12;2!DOID:114;6.12e-12;2!DOID:2152;2.57e-07;1!DOID:3111;3.67e-07;1!DOID:3603;3.67e-07;1!DOID:178;8.47e-07;1!DOID:326;8.47e-07;1!DOID:3978;8.47e-07;1!DOID:3394;8.47e-07;1!DOID:5844;8.47e-07;1 | |ontology_enrichment_celltype_v019_2=CL:0000313,2.50e-07,1 | ||
|ontology_enrichment_uberon=UBERON:0001829;4.13e-13;2!UBERON:0002294;1.00e-12;7!UBERON:0001173;1.00e-12;7!UBERON:0003127;6.12e-12;2!UBERON:0001044;1.31e-09;6!UBERON:0003293;1.31e-09;6!UBERON:0003294;1.31e-09;6!UBERON:0010047;1.31e-09;6!UBERON:0003408;1.31e-09;6!UBERON:0000167;1.31e-09;6!UBERON:0000058;4.09e-09;10!UBERON:0006947;1.54e-08;3!UBERON:0004054;1.54e-08;3!UBERON:0002110;3.01e-08;3!UBERON:0001831;2.09e-07;1!UBERON:0001567;2.09e-07;1!UBERON:0001736;2.22e-07;1!UBERON:0004911;2.57e-07;1!UBERON:0000998;2.98e-07;1!UBERON:0006868;2.98e-07;1!UBERON:0001041;7.22e-07;14!UBERON:0002084;8.47e-07;1!UBERON:0001000;8.47e-07;1!UBERON:0004913;8.47e-07;1!UBERON:0003703;8.47e-07;1!UBERON:0002082;8.47e-07;1!UBERON:0005352;8.47e-07;1!UBERON:0001174;8.47e-07;1!UBERON:0004914;8.47e-07;1 | |ontology_enrichment_development_v019=UBERON:0008801;2.09e-07;1!UBERON:0006298;2.22e-07;1!UBERON:0005754;2.98e-07;1!UBERON:0010226;8.47e-07;1!UBERON:0006242;8.47e-07;1 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;2.70e-12;2!DOID:114;6.12e-12;2!DOID:2152;2.57e-07;1!DOID:3111;3.67e-07;1!DOID:3603;3.67e-07;1!DOID:178;8.47e-07;1!DOID:326;8.47e-07;1!DOID:3978;8.47e-07;1!DOID:3394;8.47e-07;1!DOID:5844;8.47e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.95e-12,2;DOID:114,5.19e-12,2;DOID:2152,2.50e-07,1;DOID:3111,3.78e-07,1;DOID:3603,3.78e-07,1;DOID:178,6.76e-07,1;DOID:326,6.76e-07,1;DOID:3978,6.76e-07,1;DOID:3394,6.76e-07,1;DOID:5844,6.76e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.31e-20!115;UBERON:0000466!2.01e-11!126;UBERON:0001007!1.30e-10!155;UBERON:0001555!1.30e-10!155;UBERON:0007026!1.30e-10!155;UBERON:0004119!5.09e-10!169;UBERON:0000925!5.09e-10!169;UBERON:0006595!5.09e-10!169;UBERON:0002294!6.99e-10!7;UBERON:0001173!6.99e-10!7;UBERON:0004912!6.99e-10!7;UBERON:0004921!8.21e-10!129;UBERON:0004185!8.21e-10!129;UBERON:0000464!2.36e-09!104;UBERON:0000077!3.66e-09!130;UBERON:0000481!1.29e-07!347;UBERON:0001048!2.27e-07!168;UBERON:0002110!9.97e-07!3;UBERON:0006242!9.97e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;4.13e-13;2!UBERON:0002294;1.00e-12;7!UBERON:0001173;1.00e-12;7!UBERON:0003127;6.12e-12;2!UBERON:0001044;1.31e-09;6!UBERON:0003293;1.31e-09;6!UBERON:0003294;1.31e-09;6!UBERON:0010047;1.31e-09;6!UBERON:0003408;1.31e-09;6!UBERON:0000167;1.31e-09;6!UBERON:0000058;4.09e-09;10!UBERON:0006947;1.54e-08;3!UBERON:0004054;1.54e-08;3!UBERON:0002110;3.01e-08;3!UBERON:0001831;2.09e-07;1!UBERON:0001567;2.09e-07;1!UBERON:0001736;2.22e-07;1!UBERON:0004911;2.57e-07;1!UBERON:0000998;2.98e-07;1!UBERON:0006868;2.98e-07;1!UBERON:0001041;7.22e-07;14!UBERON:0002084;8.47e-07;1!UBERON:0001000;8.47e-07;1!UBERON:0004913;8.47e-07;1!UBERON:0003703;8.47e-07;1!UBERON:0002082;8.47e-07;1!UBERON:0005352;8.47e-07;1!UBERON:0001174;8.47e-07;1!UBERON:0004914;8.47e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,4.14e-13,2;UBERON:0003127,2.64e-12,2;UBERON:0002294,6.44e-10,9;UBERON:0001173,6.44e-10,9;UBERON:0004912,6.44e-10,9;UBERON:0001044,1.31e-09,6;UBERON:0003293,1.31e-09,6;UBERON:0003294,1.31e-09,6;UBERON:0010047,1.31e-09,6;UBERON:0000167,1.31e-09,6;UBERON:0006947,1.28e-08,3;UBERON:0004054,1.28e-08,3;UBERON:0002110,4.05e-08,3;UBERON:0006242,4.05e-08,3;UBERON:0007023,5.78e-08,114;UBERON:0002553,1.08e-07,61;UBERON:0001831,2.09e-07,1;UBERON:0001567,2.09e-07,1;UBERON:0008801,2.09e-07,1;UBERON:0001736,2.22e-07,1;UBERON:0006298,2.22e-07,1;UBERON:0004911,2.50e-07,1;UBERON:0000058,2.91e-07,19;UBERON:0000998,2.99e-07,1;UBERON:0006868,2.99e-07,1;UBERON:0002084,4.51e-07,1;UBERON:0002082,4.51e-07,1;UBERON:0010226,4.51e-07,1;UBERON:0001000,6.38e-07,1;UBERON:0005352,6.38e-07,1;UBERON:0004913,8.02e-07,1;UBERON:0003703,8.02e-07,1;UBERON:0001174,8.02e-07,1;UBERON:0004914,8.02e-07,1 | |||
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| ||
|short_description=p3@ProSAPiP1 | |short_description=p3@ProSAPiP1 | ||
}} | }} |
Latest revision as of 03:52, 25 September 2015
Short description: | p3@ProSAPiP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ProSAPiP1_5end |
Coexpression cluster: | C70_parotid_submaxillary_salivary_throat_trachea_aorta_tongue |
Association with transcript: | 264bp_to_ENST00000329152, ENST00000337576, NM_014731, uc002wia.1_5end |
EntrezGene: | ProSAPiP1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
serous secreting cell | 2.50e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 4.14e-13 | 2 |
open tracheal system trachea | 2.64e-12 | 2 |
biliary system | 6.44e-10 | 9 |
biliary tree | 6.44e-10 | 9 |
biliary bud | 6.44e-10 | 9 |
saliva-secreting gland | 1.31e-09 | 6 |
gland of oral region | 1.31e-09 | 6 |
gland of foregut | 1.31e-09 | 6 |
oral gland | 1.31e-09 | 6 |
oral cavity | 1.31e-09 | 6 |
male genital duct | 1.28e-08 | 3 |
internal male genitalia | 1.28e-08 | 3 |
gallbladder | 4.05e-08 | 3 |
gall bladder primordium | 4.05e-08 | 3 |
adult organism | 5.78e-08 | 114 |
anatomical cavity | 1.08e-07 | 61 |
parotid gland | 2.09e-07 | 1 |
cheek | 2.09e-07 | 1 |
parotid gland primordium | 2.09e-07 | 1 |
submandibular gland | 2.22e-07 | 1 |
submandibular gland primordium | 2.22e-07 | 1 |
epithelium of female gonad | 2.50e-07 | 1 |
duct | 2.91e-07 | 19 |
seminal vesicle | 2.99e-07 | 1 |
seminal fluid secreting gland | 2.99e-07 | 1 |
heart left ventricle | 4.51e-07 | 1 |
cardiac ventricle | 4.51e-07 | 1 |
future cardiac ventricle | 4.51e-07 | 1 |
vas deferens | 6.38e-07 | 1 |
spermatic cord | 6.38e-07 | 1 |
hepatopancreatic ampulla | 8.02e-07 | 1 |
extrahepatic bile duct | 8.02e-07 | 1 |
common bile duct | 8.02e-07 | 1 |
duodenal papilla | 8.02e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.95e-12 | 2 |
heart disease | 5.19e-12 | 2 |
ovary epithelial cancer | 2.50e-07 | 1 |
cystadenocarcinoma | 3.78e-07 | 1 |
mucinous cystadenocarcinoma | 3.78e-07 | 1 |
vascular disease | 6.76e-07 | 1 |
ischemia | 6.76e-07 | 1 |
extrinsic cardiomyopathy | 6.76e-07 | 1 |
myocardial ischemia | 6.76e-07 | 1 |
myocardial infarction | 6.76e-07 | 1 |