FFCP PHASE1:Hg19::chr1:218519267..218519282,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7042 | |EntrezGene=7042 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11768 | |HGNC=11768 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-108bp_to_uc001hll.2,uc001hlm.2,uc001hln.2,uc001hlo.2,uc010pue.1_5end | |association_with_transcript=-108bp_to_uc001hll.2,uc001hlm.2,uc001hln.2,uc001hlo.2,uc010pue.1_5end | ||
|cluster_id=chr1:218519267..218519282,+ | |||
|description=CAGE_peak_10_at_TGFB2_5end | |description=CAGE_peak_10_at_TGFB2_5end | ||
|id=chr1:218519267..218519282,+ | |id=chr1:218519267..218519282,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000708;6.16e-08;3 | |ontology_enrichment_celltype_v019=CL:0000708;6.16e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000708,3.85e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0006241;2.96e-08;3!UBERON:0003057;2.96e-08;3 | |ontology_enrichment_development_v019=UBERON:0006241;2.96e-08;3!UBERON:0003057;2.96e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!3.08e-22!69;UBERON:0006238!3.08e-22!69;UBERON:0001017!3.40e-22!82;UBERON:0005743!3.74e-22!86;UBERON:0001049!6.24e-21!57;UBERON:0005068!6.24e-21!57;UBERON:0006241!6.24e-21!57;UBERON:0007135!6.24e-21!57;UBERON:0000073!7.97e-21!94;UBERON:0001016!7.97e-21!94;UBERON:0002616!2.06e-20!59;UBERON:0000033!4.01e-19!123;UBERON:0003075!7.76e-19!86;UBERON:0007284!7.76e-19!86;UBERON:0004111!4.45e-18!241;UBERON:0000477!4.93e-18!286;UBERON:0002346!1.31e-17!90;UBERON:0000153!1.40e-17!129;UBERON:0007811!1.40e-17!129;UBERON:0000119!6.79e-17!312;UBERON:0004121!8.37e-17!169;UBERON:0000475!2.47e-16!365;UBERON:0000025!3.27e-16!194;UBERON:0000924!3.88e-16!173;UBERON:0006601!3.88e-16!173;UBERON:0000483!1.37e-15!309;UBERON:0000481!1.38e-15!347;UBERON:0002780!7.18e-15!41;UBERON:0001890!7.18e-15!41;UBERON:0006240!7.18e-15!41;UBERON:0001893!1.83e-14!34;UBERON:0003080!3.52e-14!42;UBERON:0002791!6.39e-14!33;UBERON:0001869!6.76e-14!32;UBERON:0002020!2.58e-13!34;UBERON:0003528!2.58e-13!34;UBERON:0003056!1.06e-12!61;UBERON:0000956!4.43e-11!25;UBERON:0000203!4.43e-11!25;UBERON:0002619!7.46e-11!22;UBERON:0007023!2.18e-10!115;UBERON:0001950!1.29e-09!20;UBERON:0000922!6.25e-09!612;UBERON:0002050!1.52e-08!605;UBERON:0005423!1.52e-08!605;UBERON:0000468!1.68e-08!659;UBERON:0000064!1.83e-08!219;UBERON:0000923!2.40e-08!604;UBERON:0005291!2.40e-08!604;UBERON:0006598!2.40e-08!604;UBERON:0002532!2.40e-08!604;UBERON:0003076!3.65e-08!15;UBERON:0003057!3.65e-08!15;UBERON:0000467!8.40e-08!625;UBERON:0000062!1.03e-07!511;UBERON:0000480!1.11e-07!626 | |ontology_enrichment_uberon=UBERON:0000955!3.08e-22!69;UBERON:0006238!3.08e-22!69;UBERON:0001017!3.40e-22!82;UBERON:0005743!3.74e-22!86;UBERON:0001049!6.24e-21!57;UBERON:0005068!6.24e-21!57;UBERON:0006241!6.24e-21!57;UBERON:0007135!6.24e-21!57;UBERON:0000073!7.97e-21!94;UBERON:0001016!7.97e-21!94;UBERON:0002616!2.06e-20!59;UBERON:0000033!4.01e-19!123;UBERON:0003075!7.76e-19!86;UBERON:0007284!7.76e-19!86;UBERON:0004111!4.45e-18!241;UBERON:0000477!4.93e-18!286;UBERON:0002346!1.31e-17!90;UBERON:0000153!1.40e-17!129;UBERON:0007811!1.40e-17!129;UBERON:0000119!6.79e-17!312;UBERON:0004121!8.37e-17!169;UBERON:0000475!2.47e-16!365;UBERON:0000025!3.27e-16!194;UBERON:0000924!3.88e-16!173;UBERON:0006601!3.88e-16!173;UBERON:0000483!1.37e-15!309;UBERON:0000481!1.38e-15!347;UBERON:0002780!7.18e-15!41;UBERON:0001890!7.18e-15!41;UBERON:0006240!7.18e-15!41;UBERON:0001893!1.83e-14!34;UBERON:0003080!3.52e-14!42;UBERON:0002791!6.39e-14!33;UBERON:0001869!6.76e-14!32;UBERON:0002020!2.58e-13!34;UBERON:0003528!2.58e-13!34;UBERON:0003056!1.06e-12!61;UBERON:0000956!4.43e-11!25;UBERON:0000203!4.43e-11!25;UBERON:0002619!7.46e-11!22;UBERON:0007023!2.18e-10!115;UBERON:0001950!1.29e-09!20;UBERON:0000922!6.25e-09!612;UBERON:0002050!1.52e-08!605;UBERON:0005423!1.52e-08!605;UBERON:0000468!1.68e-08!659;UBERON:0000064!1.83e-08!219;UBERON:0000923!2.40e-08!604;UBERON:0005291!2.40e-08!604;UBERON:0006598!2.40e-08!604;UBERON:0002532!2.40e-08!604;UBERON:0003076!3.65e-08!15;UBERON:0003057!3.65e-08!15;UBERON:0000467!8.40e-08!625;UBERON:0000062!1.03e-07!511;UBERON:0000480!1.11e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0002240;2.96e-08;3!UBERON:0005174;2.96e-08;3!UBERON:0001137;2.96e-08;3!UBERON:0003210;6.16e-08;3 | |ontology_enrichment_uberon_v019=UBERON:0002240;2.96e-08;3!UBERON:0005174;2.96e-08;3!UBERON:0001137;2.96e-08;3!UBERON:0003210;6.16e-08;3 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.74e-11,81;UBERON:0003075,6.29e-10,82;UBERON:0007284,6.29e-10,82;UBERON:0001049,7.83e-10,56;UBERON:0005068,7.83e-10,56;UBERON:0006241,7.83e-10,56;UBERON:0007135,7.83e-10,56;UBERON:0000025,1.57e-09,192;UBERON:0002346,3.38e-09,86;UBERON:0003076,4.05e-09,15;UBERON:0003057,4.05e-09,15;UBERON:0001016,4.40e-09,89;UBERON:0010371,4.40e-09,104;UBERON:0000955,4.48e-09,68;UBERON:0006238,4.48e-09,68;UBERON:0000119,2.23e-08,309;UBERON:0002240,3.76e-08,3;UBERON:0005174,3.76e-08,3;UBERON:0001137,3.76e-08,3;UBERON:0003210,3.85e-08,3;UBERON:0004111,2.83e-07,240;UBERON:0000073,5.16e-07,53;UBERON:0002616,5.16e-07,53;UBERON:0000483,6.88e-07,306 | |||
|phase1_expression=0.363356758541113,0,0.140954404095971,1.0007329835313,0.446961094427288,0,0,0,0.783556884599516,0,0,0.436882744260345,0,0,0,0,0.602694528023977,2.19093027116212,0.487932798790507,0.738726348460727,0.612002073732759,0.313454721478088,0,0.684372125364421,1.12988375635323,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.639312809217652,0.361439152384566,0.50133791063589,0.289693037921647,2.3858578411533,0,0.567208902984407,2.88248216701333,1.40535657109002,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0.419499436209906,0,0,0,0,1.00416183829401,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.379891534993739,1.72131935057184,1.14734648299525,0.709336764396714,0.560677600142307,2.1349799145941,1.2333377420858,0.311211035399766,0.134710672069688,0,2.11900398702904,0,0,0,0,0,0,0,0,0.816616685019573,0,1.34323515528495,0,0.494533858557114,0,0,0,0.125118519871964,0,0,0.30648779579902,0.150238058906597,0.340296549480063,0.358779271377724,0,0.211931901159562,0,0.103052529238439,0.257640540045629,0,0,0,0,0,0.161646056818812,0.355009592516614,0,0,0.193260853163297,0.272746120590835,0,0,0,0.116193942869518,0.10366105501537,0,0,1.56449532329816,0,0,0,0,0,0.337169380156203,0,0,0,0,0,0,0,0,2.80483547606892,0.4115740113314,0,0,0,0,0,0,1.3725424823882,0.439001141634502,0,0,0,0,0,0,0.231860809950154,5.9878434060269,0.144366447761074,0,0.380508304469197,1.58040879591855,0,0,0,0,0,1.17587489739202,0,1.07470227243418,0,0.383382679165211,0,0,0,0,0,0,0,0,0,0,0,0,1.90622843387113,3.48768055066624,1.1734125731352,0.387815147273333,0,0,0.531876233169741,0,0.257207374262142,0,0,1.00084595560703,0,0.823240336780769,0,0.710783897485092,0,0,0,0.099972991182057,0,0,0,1.4377491329495,2.29723871668228,0,0.144781306667579,0,0.358121926479791,0,0,0,0,1.01637849688985,0,0,0,0,0,0,0,0.736148950314839,0,0,0.415941723061614,1.07057393278297,0.473107245101804,0.234282829985426,0.300946099727719,2.27407504055985,0,0.664225598535437,0.737476674166813,0,1.56640925970192,0.686286847621712,0,0,0.106727557803444,0,0,0,0,0.153461973288062,0,0.640695746278505,0,0.321707842287215,1.48418066444991,0,0,0.0821271560138091,0,0,0,1.00253235151642,0.460404944679482,0.114814448164607,0,0.262248829918848,0,0.0770153371044148,0,1.46139224653261,0.211103257785751,0,0.170093705276516,0.215915916102139,0,1.35473218771926,1.00337954770971,0,0,0.671624264166535,0,0,0,1.31205858279882,0,0,0.457847324091717,0.330037999682352,0,0.650060246036521,0,0.193341436584244,0,0.15350367472613,0,0,0,0,0.0890320356467374,0.165284915360978,0.192190067365106,0.255225424989168,0.2023155617111,0,1.25924938732256,0.6970372701606,0.308033580176089,0,0,0.74129687641568,0.572499546967965,1.116475108079,0.632758849437452,0.953150969619124,0,0,0.95460974377781,0,0.179872457583315,0,0,0.404364963146632,0,0,0.48763373908959,0.243713489631284,1.05650146756755,0.136499911407986,0.282810863907425,0,1.10273068709225,0,0.876901770507525,0,0,0.405820753925408,0.30982349809975,0.281695602532241,0,0.88424136911809,0,0,0,0.658589785919804,0,0,0.0962221127255121,0,0,0.282431402330337,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27308917445131,0,0.296964680832639,0,0.994147647766298,1.82870241333667,0.222617410045812,0,1.05562704063997,1.19548792950642,0,0,0,0,0.622079175323615,0.449341755736634,0.179021174675609,0,0.197286811273867,0,1.11136990144637,0.969332746095218,0.74214478529481,1.99613798001194,0,0,0,0.341380344856499,1.01701460117107,0,0,0,0.173624994933292,0.885741385813839,0.241192877250816,1.52581736317083,0.552896299656123,1.18219047581419,0.438770794307945,0,0,0.615602068030377,3.98797195464504,0,0,0,0.31900115973192,0.274792780205587,0,0,0,0,0,0,0,0,0,0,0.979396848954886,0.141353071433941,0.216388639742091,0,0,0,0,0,0,1.07841812769083,0,0.234264445725339,0,0.391329237864179,0,0.394584402849391,0,0,0.821425535170343,0,0,2.65861549082874,0.661983911750998,1.88359751044335,2.38944859545918,0,0,0,0.0979923974143777,0.34823682632161,0,0.171986032471617,0,0,0,0.0969890164884194,0,0.90392296312213,0.274083849293502,0,1.07628353124994,0.195551382734803,4.08809983282822,0,0.39961921916426,0,1.71804894248874,0.514784993585894,0,0,0,0.407712618220842,1.04602846312333,0.917983958726896,0,0.600420288709789,1.09524303113594,0,0,0,0.558564802544508,0.229160424011684,0,0,0.429226048136571,0,0.0671834724867263,2.88239906833923,1.16495949527454,0,0,0,0,0,1.59045937961861,0.953423842781029,0,0,0.415440338029185,0,0,0.91124334987037,0,0.0788057072991982,0.157363764404994,0,2.15144807199414,0.767660789277781,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0.851940108927109,0.679872549120754,0,0,2.71494208359256,0,0.342173675768659,0.704815022316672,0.106787412567695,0,0.828478110694391,0,0,0,1.91502377331055,0,0,0,0,0.785270481251171,4.43034089983493,0.366078794705889,0.7511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| ||
|short_description=p10@TGFB2 | |short_description=p10@TGFB2 | ||
}} | }} |
Latest revision as of 04:33, 25 September 2015
Short description: | p10@TGFB2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_TGFB2_5end |
Coexpression cluster: | NA |
Association with transcript: | -108bp_to_uc001hll.2, uc001hlm.2, uc001hln.2, uc001hlo.2, uc010pue.1_5end |
EntrezGene: | TGFB2 |
HGNC: | 11768 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 3.85e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.74e-11 | 81 |
neural plate | 6.29e-10 | 82 |
presumptive neural plate | 6.29e-10 | 82 |
neural tube | 7.83e-10 | 56 |
neural rod | 7.83e-10 | 56 |
future spinal cord | 7.83e-10 | 56 |
neural keel | 7.83e-10 | 56 |
tube | 1.57e-09 | 192 |
neurectoderm | 3.38e-09 | 86 |
posterior neural tube | 4.05e-09 | 15 |
chordal neural plate | 4.05e-09 | 15 |
nervous system | 4.40e-09 | 89 |
ecto-epithelium | 4.40e-09 | 104 |
brain | 4.48e-09 | 68 |
future brain | 4.48e-09 | 68 |
cell layer | 2.23e-08 | 309 |
spinal cord | 3.76e-08 | 3 |
dorsal region element | 3.76e-08 | 3 |
dorsum | 3.76e-08 | 3 |
blood-cerebrospinal fluid barrier | 3.85e-08 | 3 |
anatomical conduit | 2.83e-07 | 240 |
regional part of nervous system | 5.16e-07 | 53 |
regional part of brain | 5.16e-07 | 53 |
epithelium | 6.88e-07 | 306 |