FFCP PHASE1:Hg19::chr17:46178219..46178262,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10951 | |EntrezGene=10951 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1551 | |HGNC=1551 | ||
|TSSclassifier=strong | |||
|UniProt=C9JWS9 | |UniProt=C9JWS9 | ||
|association_with_transcript=-275bp_to_ENST00000444685_5end | |association_with_transcript=-275bp_to_ENST00000444685_5end | ||
|cluster_id=chr17:46178219..46178262,- | |||
|coexpression_cluster_id=C38 | |coexpression_cluster_id=C38 | ||
|description=CAGE_peak_5_at_CBX1_5end | |description=CAGE_peak_5_at_CBX1_5end | ||
|id=chr17:46178219..46178262,- | |id=chr17:46178219..46178262,- | ||
|ontology_enrichment_celltype=CL:0002319;1.31e-12;25!CL:0000095;4.64e-10;17!CL:0000243;1.73e-09;15!CL:0000125;1.73e-09;15!CL:0000077;6.66e-08;19 | |ontology_enrichment_celltype=CL:0000077!2.43e-08!19;CL:0002319!7.07e-08!25;CL:0000133!8.49e-08!59;CL:0000055!1.84e-07!180 | ||
| | |ontology_enrichment_celltype_v019=CL:0002319;1.31e-12;25!CL:0000095;4.64e-10;17!CL:0000243;1.73e-09;15!CL:0000125;1.73e-09;15!CL:0000077;6.66e-08;19 | ||
|ontology_enrichment_disease=DOID:3093;3.36e-09;11 | |ontology_enrichment_celltype_v019_2=CL:0002319,6.60e-13,25;CL:0000095,2.37e-10,17;CL:0000123,2.37e-10,17;CL:0000243,9.47e-10,15;CL:0000125,9.47e-10,15;CL:0000030,9.47e-10,15;CL:0000339,9.47e-10,15;CL:0000077,8.34e-08,19;CL:0000133,1.43e-07,59 | ||
|ontology_enrichment_uberon=UBERON:0000956;7.03e-07;25!UBERON:0000203;7.03e-07;25 | |ontology_enrichment_development_v019=UBERON:0006238;3.58e-10;10!CL:0000339;1.73e-09;15 | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3093;3.36e-09;11 | |||
|ontology_enrichment_disease_v019_2=DOID:3093,1.18e-09,11 | |||
|ontology_enrichment_uberon=UBERON:0001017!2.59e-14!82;UBERON:0000073!2.70e-14!94;UBERON:0001016!2.70e-14!94;UBERON:0005743!4.39e-14!86;UBERON:0000955!4.27e-12!69;UBERON:0006238!4.27e-12!69;UBERON:0004121!6.16e-10!169;UBERON:0000924!6.63e-10!173;UBERON:0006601!6.63e-10!173;UBERON:0002020!2.01e-08!34;UBERON:0003528!2.01e-08!34;UBERON:0000033!2.45e-08!123;UBERON:0001893!2.81e-08!34;UBERON:0002616!3.71e-08!59;UBERON:0002791!3.72e-08!33;UBERON:0001869!4.28e-08!32;UBERON:0002780!4.28e-08!41;UBERON:0001890!4.28e-08!41;UBERON:0006240!4.28e-08!41;UBERON:0000153!7.21e-08!129;UBERON:0007811!7.21e-08!129;UBERON:0001049!1.12e-07!57;UBERON:0005068!1.12e-07!57;UBERON:0006241!1.12e-07!57;UBERON:0007135!1.12e-07!57;UBERON:0003080!1.42e-07!42;UBERON:0000956!1.61e-07!25;UBERON:0000203!1.61e-07!25;UBERON:0003075!2.57e-07!86;UBERON:0007284!2.57e-07!86;UBERON:0002346!3.25e-07!90 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;7.03e-07;25!UBERON:0000203;7.03e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.10e-11,89;UBERON:0001017,6.39e-11,81;UBERON:0000955,1.01e-08,68;UBERON:0006238,1.01e-08,68;UBERON:0000956,7.80e-07,25;UBERON:0000203,7.80e-07,25 | |||
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| ||
|short_description=p5@CBX1 | |short_description=p5@CBX1 | ||
}} | }} |
Latest revision as of 05:23, 25 September 2015
Short description: | p5@CBX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_CBX1_5end |
Coexpression cluster: | C38_extraskeletal_rhabdomyosarcoma_adrenal_rectal_mesothelioma_lung_Wilms |
Association with transcript: | -275bp_to_ENST00000444685_5end |
EntrezGene: | CBX1 |
HGNC: | 1551 |
UniProt: | C9JWS9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 6.60e-13 | 25 |
neuron associated cell | 2.37e-10 | 17 |
neuron associated cell (sensu Vertebrata) | 2.37e-10 | 17 |
glial cell (sensu Vertebrata) | 9.47e-10 | 15 |
glial cell | 9.47e-10 | 15 |
glioblast | 9.47e-10 | 15 |
glioblast (sensu Vertebrata) | 9.47e-10 | 15 |
mesothelial cell | 8.34e-08 | 19 |
neurectodermal cell | 1.43e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
nervous system | 5.10e-11 | 89 |
central nervous system | 6.39e-11 | 81 |
brain | 1.01e-08 | 68 |
future brain | 1.01e-08 | 68 |
cerebral cortex | 7.80e-07 | 25 |
pallium | 7.80e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
nervous system cancer | 1.18e-09 | 11 |