FFCP PHASE1:Hg19::chr12:8834179..8834186,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:8834179..8834186,+
|short_description=p7@RIMKLB
|description=CAGE_peak_7_at_RIMKLB_5end
|association_with_transcript=-9bp_to_ENST00000538758_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=57494 | |EntrezGene=57494 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29228 | |HGNC=29228 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENST00000538758_5end | |||
|cluster_id=chr12:8834179..8834186,+ | |||
|description=CAGE_peak_7_at_RIMKLB_5end | |||
|id=chr12:8834179..8834186,+ | |||
|ontology_enrichment_celltype=CL:0000066!7.23e-17!254;CL:0000039!3.19e-09!7;CL:0000586!3.19e-09!7 | |||
|ontology_enrichment_celltype_v019=CL:0000039;4.92e-22;7!CL:0000586;4.92e-22;7!CL:0002541;5.83e-09;3!CL:0002166;1.01e-08;3!CL:0000313;1.19e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.95e-22,7;CL:0000586,2.95e-22,7;CL:0002541,5.19e-09,3;CL:0002166,8.03e-09,3;CL:0000313,1.20e-07,1;CL:0000066,9.20e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.44e-15;10!UBERON:0005564;2.44e-15;10!UBERON:0003124;1.31e-07;1 | |||
|ontology_enrichment_disease=DOID:305!8.86e-22!106;DOID:0050687!4.27e-14!143;DOID:162!9.64e-07!235 | |||
|ontology_enrichment_disease_v019=DOID:2152;1.19e-07;1!DOID:3095;7.76e-07;22!DOID:2994;7.76e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.11e-14,106;DOID:0050687,6.08e-11,143;DOID:2152,1.20e-07,1;DOID:3095,6.68e-07,22;DOID:2994,6.68e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.15e-14!9;UBERON:0000065!7.89e-11!53;UBERON:0001004!5.97e-10!72;UBERON:0008947!1.57e-09!38;UBERON:0003258!1.57e-09!38;UBERON:0001557!5.40e-08!19;UBERON:0000064!6.32e-08!219;UBERON:0000072!7.90e-08!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.94e-23;9!UBERON:0001557;8.94e-23;9!UBERON:0000473;1.48e-12;8!UBERON:0003135;3.72e-09;11!UBERON:0003124;5.83e-09;3!UBERON:0000920;5.83e-09;3!UBERON:0004911;1.19e-07;1!UBERON:0000991;3.65e-07;21!UBERON:0001708;9.63e-07;4!UBERON:0008895;9.63e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.01e-22,9;UBERON:0000473,1.04e-12,8;UBERON:0001557,1.69e-10,19;UBERON:0003135,2.89e-09,11;UBERON:0000920,5.19e-09,3;UBERON:0003124,2.06e-08,7;UBERON:0004911,1.20e-07,1;UBERON:0000991,3.11e-07,21;UBERON:0009196,3.11e-07,21;UBERON:0009117,3.11e-07,21;UBERON:0005564,3.11e-07,21;UBERON:0004176,6.85e-07,22;UBERON:0001708,8.10e-07,4;UBERON:0008895,8.10e-07,4 | |||
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| ||
|short_description=p7@RIMKLB | |||
}} | }} |
Latest revision as of 05:30, 25 September 2015
Short description: | p7@RIMKLB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_RIMKLB_5end |
Coexpression cluster: | NA |
Association with transcript: | -9bp_to_ENST00000538758_5end |
EntrezGene: | RIMKLB |
HGNC: | 29228 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.95e-22 | 7 |
germ cell | 2.95e-22 | 7 |
chorionic membrane mesenchymal stem cell | 5.19e-09 | 3 |
epithelial cell of Malassez | 8.03e-09 | 3 |
serous secreting cell | 1.20e-07 | 1 |
epithelial cell | 9.20e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.01e-22 | 9 |
testis | 1.04e-12 | 8 |
upper respiratory tract | 1.69e-10 | 19 |
male reproductive organ | 2.89e-09 | 11 |
egg chorion | 5.19e-09 | 3 |
chorion | 2.06e-08 | 7 |
epithelium of female gonad | 1.20e-07 | 1 |
gonad | 3.11e-07 | 21 |
indifferent external genitalia | 3.11e-07 | 21 |
indifferent gonad | 3.11e-07 | 21 |
gonad primordium | 3.11e-07 | 21 |
external genitalia | 6.85e-07 | 22 |
jaw skeleton | 8.10e-07 | 4 |
splanchnocranium | 8.10e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.11e-14 | 106 |
cell type cancer | 6.08e-11 | 143 |
ovary epithelial cancer | 1.20e-07 | 1 |
germ cell and embryonal cancer | 6.68e-07 | 22 |
germ cell cancer | 6.68e-07 | 22 |