FFCP PHASE1:Hg19::chr11:113848216..113848228,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3359 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5297 | |||
|TSSclassifier=strong | |||
|UniProt=P46098,B4DSY6 | |||
|association_with_transcript=0bp_to_ENST00000299961,NM_001161772,uc010rxc.1_5end | |||
|cluster_id=chr11:113848216..113848228,+ | |||
|coexpression_cluster_id=C682 | |||
|description=CAGE_peak_2_at_HTR3A_5end | |||
|id=chr11:113848216..113848228,+ | |||
|ontology_enrichment_celltype=CL:0000236!9.45e-59!14;CL:0000945!1.31e-52!24;CL:0000826!1.31e-52!24;CL:0000838!1.48e-22!52;CL:0000542!4.54e-22!53;CL:0000051!4.54e-22!53;CL:0000784!2.81e-18!3;CL:0000738!4.55e-17!140;CL:0002087!2.88e-15!119;CL:0000037!2.12e-14!172;CL:0000566!2.12e-14!172;CL:0000988!2.44e-13!182;CL:0002031!1.88e-11!124;CL:0002032!9.85e-09!165;CL:0000837!9.85e-09!165;CL:0000842!2.75e-08!3;CL:0001024!6.12e-07!1;CL:0000946!9.73e-07!1;CL:0000786!9.73e-07!1;CL:0000980!9.73e-07!1 | |||
|ontology_enrichment_celltype_v019=CL:0000236;7.94e-107;13!CL:0000945;1.21e-80;24!CL:0000542;2.13e-29;53!CL:0000784;1.43e-16;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,3.05e-99,14;CL:0000945,9.06e-81,24;CL:0000826,9.06e-81,24;CL:0000838,1.72e-36,52;CL:0000542,8.97e-36,53;CL:0000051,8.97e-36,53;CL:0002087,4.21e-18,115;CL:0000738,1.98e-17,136;CL:0002031,2.80e-17,120;CL:0000784,1.61e-16,3;CL:0000037,9.16e-14,168;CL:0000988,5.72e-13,177;CL:0002032,1.95e-12,161;CL:0000837,1.95e-12,161 | |||
|ontology_enrichment_development_v019=CL:0000051;2.13e-29;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002106!1.50e-08!3;UBERON:0004854!1.50e-08!3;UBERON:0009034!1.50e-08!3;UBERON:0002095!1.50e-08!3;UBERON:0004782!1.50e-08!3;UBERON:0003281!1.50e-08!3;UBERON:0009664!1.50e-08!3;UBERON:0002296!1.50e-08!3;UBERON:0005602!1.50e-08!3;UBERON:0001179!1.50e-08!3;UBERON:0006293!1.50e-08!3;UBERON:0004177!9.75e-08!7;UBERON:0002372!3.60e-07!1;UBERON:0001961!3.60e-07!1;UBERON:0001744!3.60e-07!1;UBERON:0001735!3.60e-07!1;UBERON:0001154!4.06e-07!1;UBERON:0001153!4.06e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002372;8.64e-13;1!UBERON:0001961;8.64e-13;1!UBERON:0001744;8.64e-13;1!UBERON:0001042;8.64e-13;1!UBERON:0001735;8.64e-13;1!UBERON:0006562;4.98e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002372,9.73e-13,1;UBERON:0001961,9.73e-13,1;UBERON:0001744,9.73e-13,1;UBERON:0001735,9.73e-13,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,6.04244164526353,0.568676929949686,0.293600439334847,0,0,0,0,0,0,0,0,0,0.232429036905685,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,2.18455444504853,2.66852776159066,2.98711155796555,3.60356388332411,2.87376219977242,2.64417949113945,1.90810750907073,3.98449078376614,3.52342313622563,3.05818582500183,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10037811596945,0.571994910780128,1.48583000531826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.828851746593443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.77557054980777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281951753939561,1.22469987149797,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,1.41439311330634,0.0717222053926763,0,0,0,0,0,0,0,0,0,0.603821380773079,0 | |||
|short_description=p2@HTR3A | |||
}} |
Latest revision as of 06:34, 25 September 2015
Short description: | p2@HTR3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HTR3A_5end |
Coexpression cluster: | C682_Burkitt_lymphoma_CD19_appendix_tonsil_spleen_diffuse |
Association with transcript: | 0bp_to_ENST00000299961, NM_001161772, uc010rxc.1_5end |
EntrezGene: | HTR3A |
HGNC: | 5297 |
UniProt: | P46098B4DSY6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 3.05e-99 | 14 |
lymphocyte of B lineage | 9.06e-81 | 24 |
pro-B cell | 9.06e-81 | 24 |
lymphoid lineage restricted progenitor cell | 1.72e-36 | 52 |
lymphocyte | 8.97e-36 | 53 |
common lymphoid progenitor | 8.97e-36 | 53 |
nongranular leukocyte | 4.21e-18 | 115 |
leukocyte | 1.98e-17 | 136 |
hematopoietic lineage restricted progenitor cell | 2.80e-17 | 120 |
plasmacytoid dendritic cell | 1.61e-16 | 3 |
hematopoietic stem cell | 9.16e-14 | 168 |
hematopoietic cell | 5.72e-13 | 177 |
hematopoietic oligopotent progenitor cell | 1.95e-12 | 161 |
hematopoietic multipotent progenitor cell | 1.95e-12 | 161 |
Ontology term | p-value | n |
---|---|---|
tonsil | 9.73e-13 | 1 |
mucosa-associated lymphoid tissue | 9.73e-13 | 1 |
lymphoid tissue | 9.73e-13 | 1 |
tonsillar ring | 9.73e-13 | 1 |