FFCP PHASE1:Hg19::chr17:46675469..46675481,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3216 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5117 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=30bp_to_AB464576,CU677079,DQ890732,HQ447184_5end | |||
|cluster_id=chr17:46675469..46675481,- | |||
|description=CAGE_peak_4_at_HOXB6_5end | |||
|id=chr17:46675469..46675481,- | |||
|ontology_enrichment_celltype=CL:1000497!2.48e-12!18;CL:0002518!2.48e-12!18;CL:1000449!1.03e-11!16;CL:0002681!2.67e-10!13;CL:0002584!2.67e-10!13;CL:1000507!4.65e-09!12;CL:1000494!4.65e-09!12 | |||
|ontology_enrichment_celltype_v019=CL:1000449;5.11e-14;15!CL:0002681;1.11e-12;12!CL:0002584;1.11e-12;12!CL:1000497;5.46e-12;17!CL:0002518;5.46e-12;17!CL:1000507;1.09e-09;10!CL:1000494;1.09e-09;10!CL:1000746;3.74e-08;7!CL:1000612;3.74e-08;7 | |||
|ontology_enrichment_celltype_v019_2=CL:1000449,2.78e-14,15;CL:0002681,6.14e-13,12;CL:0002584,6.14e-13,12;CL:1000497,3.23e-12,17;CL:0002518,3.23e-12,17;CL:1000507,7.78e-10,10;CL:1000494,7.78e-10,10;CL:1000746,1.79e-08,7;CL:1000612,1.79e-08,7 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000489!2.20e-16!32;UBERON:0005177!3.16e-15!107;UBERON:0002113!1.64e-14!27;UBERON:0003918!1.64e-14!27;UBERON:0005095!1.64e-14!27;UBERON:0007687!1.64e-14!27;UBERON:0002417!6.37e-14!61;UBERON:0000916!6.37e-14!61;UBERON:0000080!2.27e-13!18;UBERON:0002120!2.27e-13!18;UBERON:0004875!2.27e-13!18;UBERON:0005721!2.27e-13!18;UBERON:0005754!2.27e-13!18;UBERON:0007297!2.27e-13!18;UBERON:0002100!5.21e-13!216;UBERON:0003887!1.51e-12!21;UBERON:0006555!1.63e-12!17;UBERON:0005103!1.63e-12!17;UBERON:0000083!1.63e-12!17;UBERON:0009201!1.63e-12!17;UBERON:0004819!1.63e-12!17;UBERON:0006553!1.63e-12!17;UBERON:0003074!1.63e-12!17;UBERON:0003060!1.63e-12!17;UBERON:0009569!4.01e-12!113;UBERON:0000058!4.63e-12!26;UBERON:0005172!8.50e-12!55;UBERON:0005173!8.50e-12!55;UBERON:0004211!1.03e-11!16;UBERON:0001285!1.03e-11!16;UBERON:0007684!1.03e-11!16;UBERON:0003220!1.03e-11!16;UBERON:0004208!1.03e-11!16;UBERON:0000353!2.14e-11!17;UBERON:0004876!3.15e-11!20;UBERON:0001225!2.67e-10!13;UBERON:0008987!2.67e-10!13;UBERON:0001008!6.09e-10!45;UBERON:0000466!1.08e-09!126;UBERON:0006554!1.33e-09!44;UBERON:0009773!4.65e-09!12;UBERON:0001231!4.65e-09!12;UBERON:0004810!4.65e-09!12;UBERON:0003104!9.79e-09!238;UBERON:0009142!9.79e-09!238;UBERON:0003886!3.62e-08!63;UBERON:0000464!1.19e-07!104;UBERON:0005256!1.31e-07!143;UBERON:0001851!2.32e-07!16;UBERON:0003064!8.88e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0000353;2.14e-14;15!UBERON:0000489;2.46e-14;29!UBERON:0002113;2.85e-14;24!UBERON:0011143;2.85e-14;24!UBERON:0006555;5.11e-14;15!UBERON:0004819;5.11e-14;15!UBERON:0001285;5.11e-14;15!UBERON:0007684;5.11e-14;15!UBERON:0001225;1.11e-12;12!UBERON:0008987;1.11e-12;12!UBERON:0006554;1.61e-10;30!UBERON:0001008;1.61e-10;30!UBERON:0004211;1.09e-09;10!UBERON:0009773;1.09e-09;10!UBERON:0001231;1.09e-09;10!UBERON:0004810;1.09e-09;10!UBERON:0001851;1.20e-09;15!UBERON:0002072;3.15e-09;5!UBERON:0002417;2.60e-08;58!UBERON:0000916;2.60e-08;58!UBERON:0000074;3.74e-08;7!UBERON:0001229;3.74e-08;7!UBERON:0005172;8.20e-08;52!UBERON:0005173;8.20e-08;52!UBERON:0011135;1.35e-07;5!UBERON:0002216;1.35e-07;5!UBERON:0011134;1.35e-07;5!UBERON:0002209;1.35e-07;5!UBERON:0002213;1.35e-07;5!UBERON:0007844;1.35e-07;5!UBERON:0011138;1.35e-07;5!UBERON:0001130;1.35e-07;5!UBERON:0001066;1.35e-07;5!UBERON:0001468;1.35e-07;5!UBERON:0006947;9.48e-07;3!UBERON:0004054;9.48e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,3.66e-17,26;UBERON:0003918,3.66e-17,26;UBERON:0011143,3.66e-17,26;UBERON:0005095,3.66e-17,26;UBERON:0007687,3.66e-17,26;UBERON:0000489,3.68e-17,31;UBERON:0006555,8.80e-16,16;UBERON:0004819,8.80e-16,16;UBERON:0002417,1.58e-15,60;UBERON:0000916,1.58e-15,60;UBERON:0000353,1.11e-14,15;UBERON:0004211,2.78e-14,15;UBERON:0009773,2.78e-14,15;UBERON:0001231,2.78e-14,15;UBERON:0001285,2.78e-14,15;UBERON:0007684,2.78e-14,15;UBERON:0004208,2.78e-14,15;UBERON:0009569,1.18e-13,112;UBERON:0000058,3.31e-13,19;UBERON:0001225,6.14e-13,12;UBERON:0008987,6.14e-13,12;UBERON:0005172,1.56e-12,54;UBERON:0005173,1.56e-12,54;UBERON:0000080,1.13e-11,9;UBERON:0002120,1.13e-11,9;UBERON:0004875,1.13e-11,9;UBERON:0005721,1.13e-11,9;UBERON:0005754,1.13e-11,9;UBERON:0007297,1.13e-11,9;UBERON:0005177,1.99e-11,101;UBERON:0003104,3.04e-10,160;UBERON:0009142,3.04e-10,160;UBERON:0005103,5.12e-10,8;UBERON:0000083,5.12e-10,8;UBERON:0009201,5.12e-10,8;UBERON:0006553,5.12e-10,8;UBERON:0003074,5.12e-10,8;UBERON:0003060,5.12e-10,8;UBERON:0001851,7.56e-10,15;UBERON:0004810,7.78e-10,10;UBERON:0002072,2.01e-09,5;UBERON:0004876,3.16e-09,11;UBERON:0002100,6.59e-09,199;UBERON:0010532,1.79e-08,7;UBERON:0000074,1.79e-08,7;UBERON:0001229,1.79e-08,7;UBERON:0001230,1.79e-08,7;UBERON:0003220,1.79e-08,7;UBERON:0005749,1.79e-08,7;UBERON:0004199,1.79e-08,7;UBERON:0004209,1.79e-08,7;UBERON:0004198,1.79e-08,7;UBERON:0003887,2.59e-08,12;UBERON:0006554,3.34e-08,47;UBERON:0001008,6.27e-08,48;UBERON:0011135,7.69e-08,5;UBERON:0002216,7.69e-08,5;UBERON:0011134,7.69e-08,5;UBERON:0002209,7.69e-08,5;UBERON:0002213,7.69e-08,5;UBERON:0005856,7.69e-08,5;UBERON:0005866,7.69e-08,5;UBERON:0005863,7.69e-08,5;UBERON:0007844,7.69e-08,5;UBERON:0011138,7.69e-08,5;UBERON:0001130,7.69e-08,5;UBERON:0001066,7.69e-08,5;UBERON:0001468,7.69e-08,5;UBERON:0006947,9.87e-07,3;UBERON:0004054,9.87e-07,3 | |||
|phase1_expression=0,14.1306345768049,3.10099689011137,0,13.4088328328186,0,15.1979926900986,2.52687949370732,20.1112933713876,4.17747692052565,3.48900583986214,0,0,1.36142988256051,1.65698687863958,0,0.602694528023977,0,0.487932798790507,0.246242116153576,0.408001382488506,0.313454721478088,0,0.136874425072884,0,0.152826811495903,0.246301768349837,0.0787107813136792,0,0,0,0,0,0,0,0,0.293600439334847,0,0,0,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320929027076094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574752439954483,0,0,0,0,0,1.32171328579026,0,0.263384084775077,0,0,0,0,0,0,0,0.111410456885174,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.785874452986276,0,0,0,0,0,0,0,0,0,0,1.04142150482278,0,0,0,0.626984899610432,0.258416759169329,0,0.33472061276467,0.402829317109147,0,1.22031028774085,0,0,0.0892997282840798,0.22452937262617,0.337834441449967,0,0,0,0,0,0,0,0,0.264818361626438,0.286836620748814,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,2.54062756938062,3.64046945795671,3.39933183173076,1.96631129383148,0,0,0,0,0,5.46096817162816,7.18618141816238,0,0,0,0,0,0,0.113432183160021,0,0.213557388818567,0.423863802319124,0.300091096084402,0.721367704669072,0,0.37223371266318,0.843881661206331,0.194874010322397,0,0.552299391853796,0,0.710019185033229,0.201504196455281,0,0,0,0,0,0,0,0,0,0,0,1.28648187638577,0,0.928735856063958,2.88751792667834,0,0.168584690078102,0,0,0,0,0,0,0,2.95262181849859,7.01208869017229,1.2347220339942,0,0,0,0.590789906681404,0,0.983907508344908,0,0,0,0.100528972411631,0,0,1.03993478527958,0,0,0,0.288732895522148,0.462985512576611,0.190254152234598,0,0,0,0,0.148631162288728,0,0,0,0.268675568108545,0,0,2.46331618947972,1.05658120815871,0.621984346622316,0.720599767084807,0.25248486685276,0.444485260045183,0,0,0,0.411309970813294,0,0.285826432630578,0,0,0,3.36106460970222,3.57656445851882,0.845302752556,0,0,0.257207374262142,4.25547396069835,0,0.285955987316295,0,4.11620168390384,0.65147236858747,0.710783897485092,0,0,0,0.299918973546171,0,0,0,0,0,1.42636905040718,0.579125226670317,0.410952645100767,0.179060963239896,0.448340575974109,0,0,0,0.254094624222463,0,0,0,0,0,0,0,1.59498939234882,3.50119364741774,1.35632511849868,0,0,0,0,0.300946099727719,0,1.03473071292505,0,0.368738337083406,0,1.37060810223918,0.343143423810856,0,0,0,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,1.40953064181271,0.511707249066704,2.73451665944133,0,3.23840356985577,1.77561725313127,1.88892458831761,1.03850885836724,1.51073491997947,1.57117284469109,0,0,0,0,0,2.25599806453706,0.693138033939733,3.13739907670742,1.46139224653261,0.316654886678627,5.68666920354483,1.70093705276516,0.647747748306418,3.08454505380579,1.62567862526312,1.50506932156456,3.05851527654046,3.3243040357149,4.70136984916574,0,0,0,0,0,1.03041011647722,0,0,0,0,0,0.48335359146061,0.616194468458578,0.614014698904518,0.275673144969061,0,0,0.93749290157711,0.267096106940212,0,0,0,0,0,0.31481234683064,0.6970372701606,0.924100740528266,0,0.869932992075073,0,0,0,0,0.571890581771475,11.0036050263874,7.70290178461057,0,0,1.79872457583315,0.54907405947211,2.35624804691373,0.404364963146632,0,0,0,0.243713489631284,0,0,0,0,0,0,0,1.15755106853338,1.31178950409327,0,0,0.281695602532241,0.430234056612155,1.17898849215745,0,0,0,0,0,0,0.288666338176536,0,0,0.941438007767792,0,0,0.886860307073351,0,0,0,0,0,0,0,0,0,0.213648142254946,0,0,0,0,0,0,0,0,0.211673582723883,0,1.40398589056729,0.228234679033192,0,0,1.52362600021443,0,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0,0,0,0,0,0,1.12284324244932,0.293016358543788,0,1.33732061132974,5.11445064251544,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0.552567831062295,0,1.43176155503017,0,0,0.898683511473268,0,0,0.295930216910801,0,0,0,0,0,0,0,1.44999915086959,0.227586896570999,0,0,0,0,0,0,0,0,0,0,0,0,0,0.692552326534174,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.421996129056054,0,0.282706142867882,0,0,1.14994833854341,2.4441205797345,0.593042257361244,0.123563938946503,0.208843899010911,0,1.60515529459758,0,0,0.19566461893209,0.485560759068186,9.47002566838537,0,0,0.063186579628488,1.05226393590145,2.90326935912292,0.664653872707185,0.330991955875499,0.941798755221676,0,5.69219092059585,2.21879476821022,0,0.0979923974143777,0.261177619741208,4.19344003780872,1.54787429224455,0,0,0,0.290967049465258,0,0,0.274083849293502,0.19871461170299,0,1.36885967914362,0,0,0,0.72045208577053,1.4889757501569,2.05913997434357,0,1.36677789121976,0.235694034616795,1.49494626680975,1.882851233622,0.305994652908965,0.577901179803038,0,0,0,0,0.262887354279314,0.279282401272254,0,0,0.199679000498991,0,0,0.134366944973453,2.16179930125442,1.16495949527454,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0.77380195455795,0,0,3.23103399926713,2.30800187793992,0,0,0.767660789277781,0,0,0,0,0,0.326587360109409,1.19730191562487,1.39557285273876,1.02232813071253,0.339936274560377,0.293104467356165,1.32506888912221,0,0,0,0,1.06787412567695,0.628817220398664,0.828478110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| |||
|short_description=p4@HOXB6 | |||
}} |
Latest revision as of 07:20, 25 September 2015
Short description: | p4@HOXB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_HOXB6_5end |
Coexpression cluster: | NA |
Association with transcript: | 30bp_to_AB464576, CU677079, DQ890732, HQ447184_5end |
EntrezGene: | HOXB6 |
HGNC: | 5117 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of nephron | 2.78e-14 | 15 |
kidney cortical cell | 6.14e-13 | 12 |
renal cortical epithelial cell | 6.14e-13 | 12 |
kidney cell | 3.23e-12 | 17 |
kidney epithelial cell | 3.23e-12 | 17 |
kidney tubule cell | 7.78e-10 | 10 |
nephron tubule epithelial cell | 7.78e-10 | 10 |
glomerular cell | 1.79e-08 | 7 |
kidney corpuscule cell | 1.79e-08 | 7 |