FFCP PHASE1:Mm9::chr10:10277894..10277923,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67844 | |EntrezGene=67844 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=116 | |||
|TSSclassifier=NA | |||
|UniProt=Q0PD23,Q9CZE3 | |UniProt=Q0PD23,Q9CZE3 | ||
|association_with_transcript=81bp_to_NM_026405,uc007ejg.1_5end | |association_with_transcript=81bp_to_NM_026405,uc007ejg.1_5end | ||
|cluster_id=chr10:10277894..10277923,- | |||
|description=CAGE_peak_3_at_Rab32_5end | |description=CAGE_peak_3_at_Rab32_5end | ||
|id=chr10:10277894..10277923,- | |id=chr10:10277894..10277923,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!6.91e-14!70;UBERON:0005256!3.37e-10!47;UBERON:0002204!1.31e-09!32;UBERON:0002107!1.60e-09!22;UBERON:0007499!1.60e-09!22;UBERON:0006925!1.60e-09!22;UBERON:0009497!1.60e-09!22;UBERON:0000015!1.60e-09!22;UBERON:0002423!1.60e-09!22;UBERON:0006235!1.60e-09!22;UBERON:0008835!1.60e-09!22;UBERON:0003894!1.60e-09!22;UBERON:0004161!1.60e-09!22;UBERON:0008836!1.60e-09!22;UBERON:0009854!2.02e-08!23;UBERON:0009856!2.02e-08!23;UBERON:0000926!2.12e-08!193;UBERON:0004120!2.12e-08!193;UBERON:0006603!2.12e-08!193;UBERON:0005172!2.78e-08!49;UBERON:0005173!2.78e-08!49;UBERON:0002417!2.78e-08!49;UBERON:0000916!2.78e-08!49;UBERON:0009569!2.92e-08!66;UBERON:0002371!5.86e-08!16;UBERON:0001474!8.71e-08!22;UBERON:0004765!8.71e-08!22;UBERON:0001434!8.71e-08!22 | |ontology_enrichment_uberon=UBERON:0002405!6.91e-14!70;UBERON:0005256!3.37e-10!47;UBERON:0002204!1.31e-09!32;UBERON:0002107!1.60e-09!22;UBERON:0007499!1.60e-09!22;UBERON:0006925!1.60e-09!22;UBERON:0009497!1.60e-09!22;UBERON:0000015!1.60e-09!22;UBERON:0002423!1.60e-09!22;UBERON:0006235!1.60e-09!22;UBERON:0008835!1.60e-09!22;UBERON:0003894!1.60e-09!22;UBERON:0004161!1.60e-09!22;UBERON:0008836!1.60e-09!22;UBERON:0009854!2.02e-08!23;UBERON:0009856!2.02e-08!23;UBERON:0000926!2.12e-08!193;UBERON:0004120!2.12e-08!193;UBERON:0006603!2.12e-08!193;UBERON:0005172!2.78e-08!49;UBERON:0005173!2.78e-08!49;UBERON:0002417!2.78e-08!49;UBERON:0000916!2.78e-08!49;UBERON:0009569!2.92e-08!66;UBERON:0002371!5.86e-08!16;UBERON:0001474!8.71e-08!22;UBERON:0004765!8.71e-08!22;UBERON:0001434!8.71e-08!22 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005256,1.58e-12,45;UBERON:0002107,2.08e-11,22;UBERON:0007499,2.08e-11,22;UBERON:0006925,2.08e-11,22;UBERON:0009497,2.08e-11,22;UBERON:0000015,2.08e-11,22;UBERON:0002423,2.08e-11,22;UBERON:0006235,2.08e-11,22;UBERON:0008835,2.08e-11,22;UBERON:0003894,2.08e-11,22;UBERON:0004161,2.08e-11,22;UBERON:0008836,2.08e-11,22;UBERON:0002204,4.99e-11,32;UBERON:0009854,1.60e-10,23;UBERON:0009856,1.60e-10,23;UBERON:0002365,5.46e-09,25;UBERON:0002330,5.46e-09,25;UBERON:0001474,6.40e-09,22;UBERON:0004765,6.40e-09,22;UBERON:0001434,6.40e-09,22;UBERON:0002371,9.42e-09,16;UBERON:0003104,1.41e-08,61;UBERON:0009142,1.41e-08,61;UBERON:0009569,1.73e-08,66;UBERON:0005172,3.15e-08,49;UBERON:0005173,3.15e-08,49;UBERON:0002417,3.15e-08,49;UBERON:0000916,3.15e-08,49;UBERON:0002100,8.91e-08,90;UBERON:0002193,2.56e-07,48;UBERON:0002405,2.56e-07,48;UBERON:0000490,3.09e-07,66;UBERON:0003914,6.24e-07,47;UBERON:0005911,6.65e-07,69 | |||
|phase1_expression=0.480446541314382,9.07336059862339,16.3799726180233,0.30246421130683,0,8.05820505177071,7.2419918584613,0,0.140788722151667,0,0,0,0,0,2.6648780945253,2.02475267389826,1.39912375625629,1.26184866143295,0.959801035240171,2.12194825899015,0.765389611359628,0,0,6.07971206614945,5.50582274561208,11.4846392823004,11.630573896295,16.8067561494993,0.190023419456374,0,9.3126814475228,0,0,0,0,0.332469290716985,0,30.1342774130574,33.5974198145234,29.3173296625327,52.3526024347603,50.545365886925,48.5510353031154,3.02152363141385,3.34543873024398,1.83546752161682,0.782391344348039,0.436050312760893,0.219686182734472,0.388859798148567,0.139986421625363,1.43752564364972,0,0,1.00828139742739,2.05807548828758,0.573066879877513,1.03134418455488,0.202316460859598,0.528990979272033,0.633831403506179,0.338844532069132,0,62.0930804924165,43.5101199529469,66.0746506899873,10.1864037576258,5.37905627450176,0.207379224616955,0.270011876663381,0.210324961351382,0.285650984403804,0.220868540951614,0.61245399607477,0.191690942036473,0,1.10115880999389,0,0,0.263772575460388,0.182975287204819,0,0,0,0,0,0.711858403995515,0.186399445825301,0.075726193333184,0,1.15945795480671,2.58127163094416,2.03991400112325,1.61910957491345,1.94932925234301,2.24013443548668,2.10666630197628,0.852151612890289,0.779358013808606,0.35333957451034,0,2.56652954828636,0,0,0.216491041011214,0.506719730950197,0,2.05530983494308,10.8753911131812,1.7813056687779,1.04091196059682,2.74018930480927,0.922461989024234,1.05505848386836,0.940709657085638,1.13099932196708,0.494389935468748,1.59059292611903,9.73071607144862,1.94120219936891,3.09178125844551,3.39412677194655,0,0,0,1.02182822083437,4.31334448221313,5.99902730993408,5.59108999121485,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0.324482526135515,2.13862664085664,2.86136032403214,1.26361379216837,0.210441855886474,0.260240885925407,1.14951052216736,0.180062129805349,0.60281927134286,0.0680364991513279,0,0.749613796477831,1.81092359517311,0.431135985865684,0.378212160335639,0.351902248327898,1.09597866213787,0.278047249225598,1.0447564995665,1.4404749548556,0.398068533636986,11.2354109970118,9.52187256324446,9.66155897945015,0.207125772535502,0.234526059981096,0.540186184383045,1.18372367792605,0.590292695242212,0.308534225774757,0,0,0.233530684734339,0.493679549740441,0.32833492815819,0.486412857275134,0.877199924551994,1.75640092232841,1.34206418760372,0.630869845692382,0.205809224758569,0,0.793351699990633,1.06644125267617,0.464473343720877,0.515469845288373,0.605050573870028,0.444756087689741,0.760902504450237,0.949058123089023,1.31759163779209,2.26201687920243,0.397912944082302,0.974820435595601,0.898819408654221,1.29682829924817,0.796565093017469,0.758671603812327,0.228497025219458,0,0,0.581857461502877,0.49095073923223,0.632365371242573,0.590440591918409,0.470996183524124,0.740382983530803,4.15033677922008,2.8363667971736,3.53806191203765,4.49724224769707,5.27436315610108,4.58236603529592,5.34714288740982,5.75392274901621,5.67473293712624,4.66754402419738,1.43768206527355,12.2806512730606,9.67316786655138,5.05157755894223,5.20252499213545,7.23665282045051,4.43407656399851,1.32643988239339,0,0.169745085775188,0.704070744865506,0.837531287209079,1.90434912708811,3.12213836572478,2.04925687338048,1.10732344824387,1.43509291791738,1.96635977658886,4.31712454664739,5.20736610893442,10.5553898757491,32.6343410291226,0,0,0.160550589987792,0.35163505977661,0.819674726883377,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0.584511715822624,0,0,1.13552068166615,1.06839362200353,0.325773918707152,2.3095817216155,0,0.728341908464944,0.302323556964751,0.377210159511796,0.590603785761546,0.922305443831782,1.29214146584111,0.363533729477506,0.712994756769443,0.632073515871632,0,1.03135543248187,0,0.720244376125241,0.388076051348264,0.643011105094777,0.886701168211368,0.535106452806212,0.658196082408484,0,2.81606049676452,1.0591603543191,0.220528398054962,0.49465875882444,2.09903754704677,0.904693873922338,0.358117032009409,0.656563598980245,0.582961673259701,0.370850604021019,3.93003025835061,9.08102219038179,4.8150577116125,4.89757988212197,3.41735569302563,5.0331198105435,1.18984900995699,2.09927178485487,3.45499934511059,0.954670618015114,0.158167996790568,0.813277868507395,0.86404272657441,0.418176592028937,1.52853794622324,0.809186078308924,1.90102948168273,1.04702376793612,0.777689839750757,0,0,0.299033092087958,0.330916980914195,0.583353565032143,0.774958940866387,0.168956125490778,0.352071715937262,0.911430693907651,0.314578033277133,0.241584120826006,0.288030006257865,2.8441000856536,0.810900861160657,0.924398614483445,1.16928740680016,1.07416017400489,0.596044064343795,1.20195449519969,1.62458479892035,1.71642964911851,0.762068066549998,0.806609481094724,0.779663045918019,1.53938946624527,1.5193997283604,0.453460767230423,0.221985953374065,0,0,0.19318959403219,2.62755465631655,3.29672923681077,2.35805216986972,0.501572104035363,0,0.460325236507177,0.572895513439397,0.343706364687375,1.37016503954128,0,1.35004500046361,0,0,0,0.415149390336707,0.399024873401031,0.341467211508268,1.70174701947806,1.88651846365184,1.65459157605013,1.11123363900808,1.23621034343337,0.64183841918363,1.51618327058278,0.25347929989024,1.32038438970253,0.842773567228942,0.832326981263301,1.26358031702349,0.952587382566147,1.27472758539341,0.77163688185482,2.47251540481984,1.03039244094078,1.02860775715625,1.24233064311536,0.715308569841963,1.0174249164263,0.941093804153306,0.930760686808441,0.914639864363863,1.8414879800649,1.08643291076689,1.12228454331548,1.30498519936592,1.18205378850676,2.04615521584845,0.929621047115796,1.73615949883027,0.999242311751784,1.16965804222704,2.14871054048298,1.3390183244819,0.882365676478062,1.85494268496337 | |phase1_expression=0.480446541314382,9.07336059862339,16.3799726180233,0.30246421130683,0,8.05820505177071,7.2419918584613,0,0.140788722151667,0,0,0,0,0,2.6648780945253,2.02475267389826,1.39912375625629,1.26184866143295,0.959801035240171,2.12194825899015,0.765389611359628,0,0,6.07971206614945,5.50582274561208,11.4846392823004,11.630573896295,16.8067561494993,0.190023419456374,0,9.3126814475228,0,0,0,0,0.332469290716985,0,30.1342774130574,33.5974198145234,29.3173296625327,52.3526024347603,50.545365886925,48.5510353031154,3.02152363141385,3.34543873024398,1.83546752161682,0.782391344348039,0.436050312760893,0.219686182734472,0.388859798148567,0.139986421625363,1.43752564364972,0,0,1.00828139742739,2.05807548828758,0.573066879877513,1.03134418455488,0.202316460859598,0.528990979272033,0.633831403506179,0.338844532069132,0,62.0930804924165,43.5101199529469,66.0746506899873,10.1864037576258,5.37905627450176,0.207379224616955,0.270011876663381,0.210324961351382,0.285650984403804,0.220868540951614,0.61245399607477,0.191690942036473,0,1.10115880999389,0,0,0.263772575460388,0.182975287204819,0,0,0,0,0,0.711858403995515,0.186399445825301,0.075726193333184,0,1.15945795480671,2.58127163094416,2.03991400112325,1.61910957491345,1.94932925234301,2.24013443548668,2.10666630197628,0.852151612890289,0.779358013808606,0.35333957451034,0,2.56652954828636,0,0,0.216491041011214,0.506719730950197,0,2.05530983494308,10.8753911131812,1.7813056687779,1.04091196059682,2.74018930480927,0.922461989024234,1.05505848386836,0.940709657085638,1.13099932196708,0.494389935468748,1.59059292611903,9.73071607144862,1.94120219936891,3.09178125844551,3.39412677194655,0,0,0,1.02182822083437,4.31334448221313,5.99902730993408,5.59108999121485,0.149790639404823,0,0,0.173824320192276,0.255715457330331,0.20778804455956,0.324482526135515,2.13862664085664,2.86136032403214,1.26361379216837,0.210441855886474,0.260240885925407,1.14951052216736,0.180062129805349,0.60281927134286,0.0680364991513279,0,0.749613796477831,1.81092359517311,0.431135985865684,0.378212160335639,0.351902248327898,1.09597866213787,0.278047249225598,1.0447564995665,1.4404749548556,0.398068533636986,11.2354109970118,9.52187256324446,9.66155897945015,0.207125772535502,0.234526059981096,0.540186184383045,1.18372367792605,0.590292695242212,0.308534225774757,0,0,0.233530684734339,0.493679549740441,0.32833492815819,0.486412857275134,0.877199924551994,1.75640092232841,1.34206418760372,0.630869845692382,0.205809224758569,0,0.793351699990633,1.06644125267617,0.464473343720877,0.515469845288373,0.605050573870028,0.444756087689741,0.760902504450237,0.949058123089023,1.31759163779209,2.26201687920243,0.397912944082302,0.974820435595601,0.898819408654221,1.29682829924817,0.796565093017469,0.758671603812327,0.228497025219458,0,0,0.581857461502877,0.49095073923223,0.632365371242573,0.590440591918409,0.470996183524124,0.740382983530803,4.15033677922008,2.8363667971736,3.53806191203765,4.49724224769707,5.27436315610108,4.58236603529592,5.34714288740982,5.75392274901621,5.67473293712624,4.66754402419738,1.43768206527355,12.2806512730606,9.67316786655138,5.05157755894223,5.20252499213545,7.23665282045051,4.43407656399851,1.32643988239339,0,0.169745085775188,0.704070744865506,0.837531287209079,1.90434912708811,3.12213836572478,2.04925687338048,1.10732344824387,1.43509291791738,1.96635977658886,4.31712454664739,5.20736610893442,10.5553898757491,32.6343410291226,0,0,0.160550589987792,0.35163505977661,0.819674726883377,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0.584511715822624,0,0,1.13552068166615,1.06839362200353,0.325773918707152,2.3095817216155,0,0.728341908464944,0.302323556964751,0.377210159511796,0.590603785761546,0.922305443831782,1.29214146584111,0.363533729477506,0.712994756769443,0.632073515871632,0,1.03135543248187,0,0.720244376125241,0.388076051348264,0.643011105094777,0.886701168211368,0.535106452806212,0.658196082408484,0,2.81606049676452,1.0591603543191,0.220528398054962,0.49465875882444,2.09903754704677,0.904693873922338,0.358117032009409,0.656563598980245,0.582961673259701,0.370850604021019,3.93003025835061,9.08102219038179,4.8150577116125,4.89757988212197,3.41735569302563,5.0331198105435,1.18984900995699,2.09927178485487,3.45499934511059,0.954670618015114,0.158167996790568,0.813277868507395,0.86404272657441,0.418176592028937,1.52853794622324,0.809186078308924,1.90102948168273,1.04702376793612,0.777689839750757,0,0,0.299033092087958,0.330916980914195,0.583353565032143,0.774958940866387,0.168956125490778,0.352071715937262,0.911430693907651,0.314578033277133,0.241584120826006,0.288030006257865,2.8441000856536,0.810900861160657,0.924398614483445,1.16928740680016,1.07416017400489,0.596044064343795,1.20195449519969,1.62458479892035,1.71642964911851,0.762068066549998,0.806609481094724,0.779663045918019,1.53938946624527,1.5193997283604,0.453460767230423,0.221985953374065,0,0,0.19318959403219,2.62755465631655,3.29672923681077,2.35805216986972,0.501572104035363,0,0.460325236507177,0.572895513439397,0.343706364687375,1.37016503954128,0,1.35004500046361,0,0,0,0.415149390336707,0.399024873401031,0.341467211508268,1.70174701947806,1.88651846365184,1.65459157605013,1.11123363900808,1.23621034343337,0.64183841918363,1.51618327058278,0.25347929989024,1.32038438970253,0.842773567228942,0.832326981263301,1.26358031702349,0.952587382566147,1.27472758539341,0.77163688185482,2.47251540481984,1.03039244094078,1.02860775715625,1.24233064311536,0.715308569841963,1.0174249164263,0.941093804153306,0.930760686808441,0.914639864363863,1.8414879800649,1.08643291076689,1.12228454331548,1.30498519936592,1.18205378850676,2.04615521584845,0.929621047115796,1.73615949883027,0.999242311751784,1.16965804222704,2.14871054048298,1.3390183244819,0.882365676478062,1.85494268496337 | ||
|short_description=p3@Rab32 | |short_description=p3@Rab32 | ||
}} | }} |
Latest revision as of 13:37, 25 September 2015
Short description: | p3@Rab32 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Rab32_5end |
Coexpression cluster: | MCL_coexpression_mm9:116 |
Association with transcript: | 81bp_to_NM_026405, uc007ejg.1_5end |
EntrezGene: | Rab32 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
trunk mesenchyme | 1.58e-12 | 45 |
liver | 2.08e-11 | 22 |
epithelial sac | 2.08e-11 | 22 |
digestive gland | 2.08e-11 | 22 |
epithelium of foregut-midgut junction | 2.08e-11 | 22 |
anatomical boundary | 2.08e-11 | 22 |
hepatobiliary system | 2.08e-11 | 22 |
foregut-midgut junction | 2.08e-11 | 22 |
hepatic diverticulum | 2.08e-11 | 22 |
liver primordium | 2.08e-11 | 22 |
septum transversum | 2.08e-11 | 22 |
liver bud | 2.08e-11 | 22 |
musculoskeletal system | 4.99e-11 | 32 |
digestive tract diverticulum | 1.60e-10 | 23 |
sac | 1.60e-10 | 23 |
exocrine gland | 5.46e-09 | 25 |
exocrine system | 5.46e-09 | 25 |
bone element | 6.40e-09 | 22 |
skeletal element | 6.40e-09 | 22 |
skeletal system | 6.40e-09 | 22 |
bone marrow | 9.42e-09 | 16 |
mesenchyme | 1.41e-08 | 61 |
entire embryonic mesenchyme | 1.41e-08 | 61 |
subdivision of trunk | 1.73e-08 | 66 |
abdomen element | 3.15e-08 | 49 |
abdominal segment element | 3.15e-08 | 49 |
abdominal segment of trunk | 3.15e-08 | 49 |
abdomen | 3.15e-08 | 49 |
trunk | 8.91e-08 | 90 |
hemolymphoid system | 2.56e-07 | 48 |
immune system | 2.56e-07 | 48 |
unilaminar epithelium | 3.09e-07 | 66 |
epithelial tube | 6.24e-07 | 47 |
endo-epithelium | 6.65e-07 | 69 |