FFCP PHASE1:Mm9::chr3:50247461..50247471,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr3:50247461..50247471,- to FFCP PHASE1:Mm9::chr3:50247461..50247471,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=26570 | |EntrezGene=26570 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=6 | |||
|TSSclassifier=NA | |||
|UniProt=Q9WTR6,Q542C8,Q8BYV9 | |UniProt=Q9WTR6,Q542C8,Q8BYV9 | ||
|association_with_transcript=63bp_to_ENSMUST00000029297,ENSMUST00000142932,NM_011990,uc008pdi.1,uc008pdj.1_5end | |||
|cluster_id=chr3:50247461..50247471,- | |||
|description=CAGE_peak_3_at_Slc7a11_5end | |||
|id=chr3:50247461..50247471,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,5.08e-07,3;DOID:4045,5.08e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0000153!8.11e-08!94;UBERON:0000475!2.51e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000072,1.16e-13,27;UBERON:0007811,1.29e-10,36;UBERON:0006562,4.70e-10,24;UBERON:0001557,4.70e-10,24;UBERON:0001042,4.70e-10,24;UBERON:0008814,4.70e-10,24;UBERON:0009145,4.70e-10,24;UBERON:0002370,5.04e-09,23;UBERON:0000974,5.04e-09,23;UBERON:0004807,5.04e-09,23;UBERON:0005058,5.04e-09,23;UBERON:0003351,5.04e-09,23;UBERON:0009113,5.04e-09,23;UBERON:0003295,5.04e-09,23;UBERON:0009722,5.04e-09,23;UBERON:0005562,5.04e-09,23;UBERON:0007690,5.04e-09,23;UBERON:0003408,1.57e-08,24;UBERON:0000153,3.41e-08,43;UBERON:0004177,7.49e-08,29;UBERON:0005057,7.49e-08,29;UBERON:0000065,1.29e-07,41;UBERON:0001004,2.41e-07,42 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,1.02730780935303,0.638177271962691,0,0,0,0.202475267389826,0.699561878128147,0.157731082679119,0,0,0.0850432901510698,0.198581902401771,1.30599894569468,0,0,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.443461021310609,0,1.23012957516914,0,0,0,0,19.2524550138978,14.0640362014284,8.37637990358077,79.9994823722179,62.1571391312186,24.7610280045888,0.125896817975577,0.101376931219515,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0,0.677689064138264,0,0,0,0.7104801149461,0,0,0,0.135005938331691,0,0,0,0,0.0958454710182364,0,1.10115880999389,0.383062014255563,0.153606533256243,0.395658863190582,0,0,0,1.12552522006336,0.916789486660861,0.294628585473668,0.569486723196412,0.186399445825301,0.37863096666592,0.68014404096107,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,2.16491041011214,2.02687892380079,3.0331466700887,0.11418387971906,0.517875767294343,0.445326417194474,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,5.30766331169925,0.323533699894818,0,0.484875253135222,0,0,0.628340120440365,0,0.838705871541442,1.79970819298022,1.01656181658452,1.64769703345305,0.915001205637253,0.376963056338593,1.39059456153821,0.511430914660661,1.0389402227978,0.648965052271031,0,0.622034853050465,2.0217820674694,23.5694878592851,0.650602214813519,1.37941262660084,0.720248519221397,0.60281927134286,0.408218994907967,1.15302348256365,0.374806898238915,5.43277078551933,0.646703978798527,0.945530400839096,0.351902248327898,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,0,2.1066395619397,0.51469581422943,0.852490498186778,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,1.05144974282064,0,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0.398282546508734,0,0,0,0.203651327845314,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0.238043640886014,0,0.315270288212382,0,0,0.327726629431476,0.345369963731791,0.144649058581512,0,0.54390568381871,0.983528546038072,0.275936746304732,0.80275294993896,0.586058432961016,0.491804836130026,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0.425820255624806,0.178065603667255,0,0.659880491890142,1.32745138339963,0,0,1.32023555829129,0.590603785761546,0.307435147943927,0.516856586336442,0.727067458955011,0,1.26414703174326,1.05418608574999,1.03135543248187,0,0.36012218806262,0.129358683782755,0,0,0,0.164549020602121,0,0.23467170806371,0,0.441056796109924,0.16488625294148,0.807322133479528,0.120625849856312,0.596861720015682,0.656563598980245,0,0.741701208042039,0.854354403989263,0.206386867963223,2.03713980106683,0.376736914009382,0.410082683163076,0.457556346413045,3.22959016988325,1.25956307091292,1.10559979043539,0.954670618015114,0,0.203319467126849,0.108005340821801,0,0,0.404593039154462,0.0826534557253359,1.57053565190418,0.129614973291793,0,0,0,0.330916980914195,0.194451188344048,0.258319646955462,0,0,0.13020438484395,0,0,0.576060012515731,7.58426689507628,0,0.102710957164827,0.25984164595559,1.25318686967237,3.77494574084403,1.20195449519969,2.80610101631697,5.25025539730368,4.41999478598999,4.2346997757473,4.38560463328886,3.36741445741153,9.11639837016238,1.36038230169127,0,0,0,0,0.187682475451182,2.01466786693992,0.857473516316263,0,0.564751842617067,0.920650473014354,1.71868654031819,0.68741272937475,0.685082519770642,0.755393897389701,3.37511250115903,0.900642406448441,0.453142408984205,0,0,0.798049746802062,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0.187283014939765,0.192075457214608,0.114870937911227,0,0.347652977834566,0.38581844092741,0.412085900803307,0,0,0,0.238436189947321,0.145346416632329,0.282328141245992,0,0.365855945745545,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0.214871054048298,0,0.220591419119515,0.463735671240843 | |phase1_expression=0.160148847104794,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,1.02730780935303,0.638177271962691,0,0,0,0.202475267389826,0.699561878128147,0.157731082679119,0,0,0.0850432901510698,0.198581902401771,1.30599894569468,0,0,0,0,0.215471232685889,0.190023419456374,0.252030129759931,0.443461021310609,0,1.23012957516914,0,0,0,0,19.2524550138978,14.0640362014284,8.37637990358077,79.9994823722179,62.1571391312186,24.7610280045888,0.125896817975577,0.101376931219515,0,0.782391344348039,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0.202316460859598,0,0,0.677689064138264,0,0,0,0.7104801149461,0,0,0,0.135005938331691,0,0,0,0,0.0958454710182364,0,1.10115880999389,0.383062014255563,0.153606533256243,0.395658863190582,0,0,0,1.12552522006336,0.916789486660861,0.294628585473668,0.569486723196412,0.186399445825301,0.37863096666592,0.68014404096107,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,2.16491041011214,2.02687892380079,3.0331466700887,0.11418387971906,0.517875767294343,0.445326417194474,0.173485326766136,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0,0,0,5.30766331169925,0.323533699894818,0,0.484875253135222,0,0,0.628340120440365,0,0.838705871541442,1.79970819298022,1.01656181658452,1.64769703345305,0.915001205637253,0.376963056338593,1.39059456153821,0.511430914660661,1.0389402227978,0.648965052271031,0,0.622034853050465,2.0217820674694,23.5694878592851,0.650602214813519,1.37941262660084,0.720248519221397,0.60281927134286,0.408218994907967,1.15302348256365,0.374806898238915,5.43277078551933,0.646703978798527,0.945530400839096,0.351902248327898,0.43839146485515,0.278047249225598,0.348252166522167,0.205782136407943,0,2.1066395619397,0.51469581422943,0.852490498186778,0.207125772535502,0,0,0.23674473558521,0,0,0,0,0.116765342367169,0,0,0,0,0,0,1.05144974282064,0,0,0,0,0,0,0.201683524623343,0,0.190225626112559,0,0,0,0,0,0,0,0.398282546508734,0,0,0,0.203651327845314,0,0.0701358198903186,0,0.147610147979602,0,0,0,0,0,0,0.202860121388503,0,0.25462585178142,0.287696137450811,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0,0,0,0,0.167506257441816,0.238043640886014,0,0.315270288212382,0,0,0.327726629431476,0.345369963731791,0.144649058581512,0,0.54390568381871,0.983528546038072,0.275936746304732,0.80275294993896,0.586058432961016,0.491804836130026,0,0,0,0,0,0,0,0,0,0,2.24924921495265,0.425820255624806,0.178065603667255,0,0.659880491890142,1.32745138339963,0,0,1.32023555829129,0.590603785761546,0.307435147943927,0.516856586336442,0.727067458955011,0,1.26414703174326,1.05418608574999,1.03135543248187,0,0.36012218806262,0.129358683782755,0,0,0,0.164549020602121,0,0.23467170806371,0,0.441056796109924,0.16488625294148,0.807322133479528,0.120625849856312,0.596861720015682,0.656563598980245,0,0.741701208042039,0.854354403989263,0.206386867963223,2.03713980106683,0.376736914009382,0.410082683163076,0.457556346413045,3.22959016988325,1.25956307091292,1.10559979043539,0.954670618015114,0,0.203319467126849,0.108005340821801,0,0,0.404593039154462,0.0826534557253359,1.57053565190418,0.129614973291793,0,0,0,0.330916980914195,0.194451188344048,0.258319646955462,0,0,0.13020438484395,0,0,0.576060012515731,7.58426689507628,0,0.102710957164827,0.25984164595559,1.25318686967237,3.77494574084403,1.20195449519969,2.80610101631697,5.25025539730368,4.41999478598999,4.2346997757473,4.38560463328886,3.36741445741153,9.11639837016238,1.36038230169127,0,0,0,0,0.187682475451182,2.01466786693992,0.857473516316263,0,0.564751842617067,0.920650473014354,1.71868654031819,0.68741272937475,0.685082519770642,0.755393897389701,3.37511250115903,0.900642406448441,0.453142408984205,0,0,0.798049746802062,0.170733605754134,0.243106717068294,0,0,0.222246727801615,0,0,0,0,0,0.187283014939765,0.192075457214608,0.114870937911227,0,0.347652977834566,0.38581844092741,0.412085900803307,0,0,0,0.238436189947321,0.145346416632329,0.282328141245992,0,0.365855945745545,0,0.135804113845862,0,0,0.197008964751127,0,0.154936841185966,0.192906610981141,0.499621155875892,0,0.214871054048298,0,0.220591419119515,0.463735671240843 | ||
|short_description=p3@Slc7a11 | |||
}} | }} |
Latest revision as of 13:39, 25 September 2015
Short description: | p3@Slc7a11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc7a11_5end |
Coexpression cluster: | MCL_coexpression_mm9:6 |
Association with transcript: | 63bp_to_ENSMUST00000029297, ENSMUST00000142932, NM_011990, uc008pdi.1, uc008pdj.1_5end |
EntrezGene: | Slc7a11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
segment of respiratory tract | 1.16e-13 | 27 |
craniocervical region | 1.29e-10 | 36 |
pharynx | 4.70e-10 | 24 |
upper respiratory tract | 4.70e-10 | 24 |
chordate pharynx | 4.70e-10 | 24 |
pharyngeal arch system | 4.70e-10 | 24 |
pharyngeal region of foregut | 4.70e-10 | 24 |
thymus | 5.04e-09 | 23 |
neck | 5.04e-09 | 23 |
respiratory system epithelium | 5.04e-09 | 23 |
hemolymphoid system gland | 5.04e-09 | 23 |
pharyngeal epithelium | 5.04e-09 | 23 |
thymic region | 5.04e-09 | 23 |
pharyngeal gland | 5.04e-09 | 23 |
entire pharyngeal arch endoderm | 5.04e-09 | 23 |
thymus primordium | 5.04e-09 | 23 |
early pharyngeal endoderm | 5.04e-09 | 23 |
gland of gut | 1.57e-08 | 24 |
anterior region of body | 3.41e-08 | 43 |
hemopoietic organ | 7.49e-08 | 29 |
immune organ | 7.49e-08 | 29 |
respiratory tract | 1.29e-07 | 41 |
respiratory system | 2.41e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 5.08e-07 | 3 |
muscle cancer | 5.08e-07 | 3 |