FFCP PHASE1:Mm9::chr10:117229719..117229773,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=103468 | |EntrezGene=103468 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=151 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BH74,E9Q4V9,Q3V395,Q569X8 | |UniProt=Q8BH74,E9Q4V9,Q3V395,Q569X8 | ||
|association_with_transcript=0bp_to_ENSMUST00000064848,ENSMUST00000167943,NM_134010,uc007hdo.1,uc007hdp.1,uc007hdq.1,uc011xnq.1_5end | |association_with_transcript=0bp_to_ENSMUST00000064848,ENSMUST00000167943,NM_134010,uc007hdo.1,uc007hdp.1,uc007hdq.1,uc011xnq.1_5end | ||
|cluster_id=chr10:117229719..117229773,- | |||
|description=CAGE_peak_1_at_Nup107_5end | |description=CAGE_peak_1_at_Nup107_5end | ||
|id=chr10:117229719..117229773,- | |id=chr10:117229719..117229773,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!3.70e-11!29;UBERON:0002370!3.25e-09!23;UBERON:0000974!3.25e-09!23;UBERON:0004807!3.25e-09!23;UBERON:0005058!3.25e-09!23;UBERON:0003351!3.25e-09!23;UBERON:0009113!3.25e-09!23;UBERON:0003295!3.25e-09!23;UBERON:0009722!3.25e-09!23;UBERON:0005562!3.25e-09!23;UBERON:0007690!3.25e-09!23;UBERON:0000072!1.98e-08!27;UBERON:0006562!3.81e-08!24;UBERON:0001557!3.81e-08!24;UBERON:0001042!3.81e-08!24;UBERON:0008814!3.81e-08!24;UBERON:0009145!3.81e-08!24;UBERON:0003408!4.54e-08!24;UBERON:0002390!1.35e-07!45;UBERON:0003061!1.35e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004177,3.70e-11,29;UBERON:0005057,3.70e-11,29;UBERON:0002370,3.25e-09,23;UBERON:0000974,3.25e-09,23;UBERON:0004807,3.25e-09,23;UBERON:0005058,3.25e-09,23;UBERON:0003351,3.25e-09,23;UBERON:0009113,3.25e-09,23;UBERON:0003295,3.25e-09,23;UBERON:0009722,3.25e-09,23;UBERON:0005562,3.25e-09,23;UBERON:0007690,3.25e-09,23;UBERON:0000072,1.98e-08,27;UBERON:0006562,3.81e-08,24;UBERON:0001557,3.81e-08,24;UBERON:0001042,3.81e-08,24;UBERON:0008814,3.81e-08,24;UBERON:0009145,3.81e-08,24;UBERON:0003408,4.54e-08,24;UBERON:0000153,5.14e-08,43;UBERON:0002390,1.35e-07,45;UBERON:0003061,1.35e-07,45;UBERON:0000077,4.01e-07,35 | |||
|phase1_expression=9.92922852049723,8.02643437570531,8.18998630901165,7.25914107136392,12.0214975187123,13.4303417529512,10.0453435456076,15.1074288426644,9.01047821770667,6.78787126333781,22.7719897739922,21.9373437237175,14.2096605842901,17.4840804837995,30.3129883252253,25.3094084237282,27.2829132469977,15.6153771852328,17.1393042007173,16.1268067683251,9.43980520676875,19.2624445329717,25.3363795464767,6.71968175732308,7.34109699414944,6.31655160526522,5.59990595006797,8.18790684206378,6.65081968097309,7.81293402255785,8.86922042621219,45.0871778156338,32.5984337419822,15.8481681015439,16.7533939455739,17.9533416987172,16.5377178572519,13.811543814318,17.1893775795236,19.3703785270305,12.3528612486513,15.7100461540443,15.5363312969969,12.5896817975577,11.6583470902442,11.3798986340243,3.9119567217402,4.57852828398938,3.29529274101708,5.44403717407994,8.67915814077248,4.31257693094915,14.7648693330808,9.42970784614748,10.0828139742739,8.7468208252222,6.01720223871389,9.28209766099396,15.9830004079082,15.869729378161,10.775133859605,6.77689064138264,7.11435836888911,3.5995988691256,0.988866362566974,2.8419204597844,2.39680088414724,1.92109152660777,22.8117147078651,21.3309382564071,23.135745748652,9.42648248532552,11.2642955885323,24.6206506422058,28.6577958344527,29.4150011715207,9.91042928994498,12.257984456178,7.68032666281217,12.3973110466382,12.3508318863253,17.7110545989298,10.0505879640497,10.1297269805702,9.0150966188318,10.3120004915784,12.9558229527184,16.0303523409758,9.61722655331437,15.3410267016775,8.11620568364698,6.0229671388697,3.39985666853875,3.77792234146472,3.89865850468601,2.24013443548668,8.00533194750986,23.0080935480378,20.5230943636266,18.3736578745377,10.2815696436977,25.6652954828636,30.5766287647975,49.7746692207332,16.2368280758411,18.4952701796822,16.1767822404731,6.2801133845483,16.8309624370662,7.57054909230606,18.3894446372104,10.6562917409249,12.2226213545711,9.3448037142626,10.4653949350777,9.04799457573663,6.17987419335935,4.48258006451726,20.3460426948471,12.9413479957927,15.4589062922275,16.9706338597328,9.31958806090611,12.296793474485,10.6817820474862,8.43008282188352,25.4008063952551,18.5969846607956,19.0605340609597,8.83764772488454,10.0650132620098,18.2198810563653,6.25767552692195,6.39288643325826,5.194701113989,8.4365456795234,17.9237280376557,12.067476149179,7.07623723614289,3.99839526184301,22.380716189585,23.2201125477808,18.1862751103403,17.1803492332715,19.0502197623718,20.2419678050063,15.7418897260344,8.53721123438752,25.4370231660754,20.8016688184601,20.0584281546902,18.4124415239163,22.5218271872734,15.6713474934975,13.7874031393322,25.6754204195856,18.9597560574573,16.4702660553418,23.3014069504386,18.6413195281952,18.2930326785255,18.0062061461015,14.9149183418682,14.7573173810553,14.1925743856388,17.9051137457814,12.0723030629829,11.0927075248811,17.4433440908289,10.9992200932994,5.91802309684747,6.28659945928929,7.46470391989572,7.24714661306008,8.83217783969334,17.8024979416162,2.31293148088659,9.78467096655114,23.2484193083405,28.3328739669735,18.6857818917035,15.5296313959974,12.008414367623,11.223311940641,8.0669940462567,9.71723832871664,9.0480675168097,10.9426059622633,9.94316844307513,12.5834717211591,10.1584883441106,8.76221602319216,17.0701110857774,23.0781995471652,22.5415471346161,15.6811522440892,12.6069116658957,14.307707257625,9.29577095726582,7.52811754695971,6.59394656933774,6.04646103216823,4.44678940630723,32.7016407203544,22.9974024282448,27.658039823337,26.1689556591169,22.4294758569748,15.5321769586666,14.0971107350897,12.1601420081277,14.8263163121564,10.0637744569148,8.55924179637558,3.74445207737473,6.56705082662491,5.74071723270119,4.3419916922703,7.57488079683079,28.6132031773432,29.6596257124487,24.6130374374023,21.8261930908307,13.4005005953453,8.09348379012447,10.3420833364633,14.5024332577696,12.4020226203314,12.756381492599,6.22680595919804,9.67035898449015,7.66640010482011,10.5553898757491,4.89515115436839,6.39293554924747,5.79467167239938,10.2752377592187,9.61135830056066,16.2295595922909,5.30188947129183,22.7165917979705,14.055794794679,20.8960695800815,21.7461606136822,12.4767257486141,13.8707500086528,17.4068601720205,13.151513606009,18.9738133414331,8.9969968598106,11.2132667314532,21.0117412327361,17.2660176914791,8.90838664051691,3.98235415019888,24.7636248878081,20.5580018736031,11.8821200246216,9.7449624650655,8.9156192903739,9.56184684722418,14.1778154496227,13.1904030002347,8.53299246426703,8.4334886859999,6.18813259489121,10.2131881726136,19.6266592494128,15.781759421496,18.0043109426538,12.945837055886,11.9507107793387,16.1258040190079,10.0473433207818,13.8456307757589,7.20229040936989,3.96951116498931,8.07942639413252,10.4951877352339,19.1795101271536,14.5634259683826,13.459553779095,11.9507143018239,10.9400928186201,16.5744754373917,20.432299928359,22.5937323391048,24.4878994106098,21.597687979922,23.5641518402718,18.6976272993241,15.954465564897,13.4053974590291,3.81868247206045,20.8781755763549,20.3319467126849,18.0368919172408,14.2180041289839,10.0446779323242,15.6442641806392,9.09188012978695,4.4498510137285,7.64728342421578,3.72803587852155,18.6018669765783,27.5110444720921,24.8187735685646,24.306398543006,17.9532154634046,19.2609983059487,16.6647278876971,20.4420884205002,15.938620352708,24.3999962034266,12.3852902690882,21.8047673233443,24.3270258348197,24.4452078052289,28.0628977632037,29.002324698132,25.2325320572206,32.5729668199116,26.5841148914239,31.9053981836147,32.1592724084099,28.432984208589,23.4873492582803,30.3067301167038,23.7260111428585,4.98806843953465,36.8496682600947,35.5266872173524,28.0367309328011,6.18206700903009,8.44571139530319,8.79127796482872,9.00347192132076,3.51100472824754,6.21227026878773,6.90487854760765,6.87474616127276,4.29632955859219,7.53590771747707,8.3093328712867,8.77529250301348,9.45674526770863,8.15656336171568,10.8729665467882,27.1922850670543,23.1434426572598,17.9270286041841,16.7743634777123,18.6555714738904,11.5821410323509,14.0015438515018,11.743998262617,9.94849549734627,14.1510438587727,10.3926512954998,9.99719609346204,14.1398676279522,12.3568544141398,14.4737381768145,11.9073422820768,15.4126153506658,14.4681915347779,11.1263193216893,12.217510371155,12.6861623382604,12.0683548188349,14.0677352068919,13.5172167468066,14.3046258231303,12.7768057916432,16.8293735042951,11.8381370147029,15.2100607507365,10.661703161497,14.7107422473976,12.8055827088233,15.1415485972785,13.789378865551,13.1176495467176,12.7403394748352,13.5680332898337,8.59484216193193,9.94699326757986,12.5737108898124,10.8977882741598 | |phase1_expression=9.92922852049723,8.02643437570531,8.18998630901165,7.25914107136392,12.0214975187123,13.4303417529512,10.0453435456076,15.1074288426644,9.01047821770667,6.78787126333781,22.7719897739922,21.9373437237175,14.2096605842901,17.4840804837995,30.3129883252253,25.3094084237282,27.2829132469977,15.6153771852328,17.1393042007173,16.1268067683251,9.43980520676875,19.2624445329717,25.3363795464767,6.71968175732308,7.34109699414944,6.31655160526522,5.59990595006797,8.18790684206378,6.65081968097309,7.81293402255785,8.86922042621219,45.0871778156338,32.5984337419822,15.8481681015439,16.7533939455739,17.9533416987172,16.5377178572519,13.811543814318,17.1893775795236,19.3703785270305,12.3528612486513,15.7100461540443,15.5363312969969,12.5896817975577,11.6583470902442,11.3798986340243,3.9119567217402,4.57852828398938,3.29529274101708,5.44403717407994,8.67915814077248,4.31257693094915,14.7648693330808,9.42970784614748,10.0828139742739,8.7468208252222,6.01720223871389,9.28209766099396,15.9830004079082,15.869729378161,10.775133859605,6.77689064138264,7.11435836888911,3.5995988691256,0.988866362566974,2.8419204597844,2.39680088414724,1.92109152660777,22.8117147078651,21.3309382564071,23.135745748652,9.42648248532552,11.2642955885323,24.6206506422058,28.6577958344527,29.4150011715207,9.91042928994498,12.257984456178,7.68032666281217,12.3973110466382,12.3508318863253,17.7110545989298,10.0505879640497,10.1297269805702,9.0150966188318,10.3120004915784,12.9558229527184,16.0303523409758,9.61722655331437,15.3410267016775,8.11620568364698,6.0229671388697,3.39985666853875,3.77792234146472,3.89865850468601,2.24013443548668,8.00533194750986,23.0080935480378,20.5230943636266,18.3736578745377,10.2815696436977,25.6652954828636,30.5766287647975,49.7746692207332,16.2368280758411,18.4952701796822,16.1767822404731,6.2801133845483,16.8309624370662,7.57054909230606,18.3894446372104,10.6562917409249,12.2226213545711,9.3448037142626,10.4653949350777,9.04799457573663,6.17987419335935,4.48258006451726,20.3460426948471,12.9413479957927,15.4589062922275,16.9706338597328,9.31958806090611,12.296793474485,10.6817820474862,8.43008282188352,25.4008063952551,18.5969846607956,19.0605340609597,8.83764772488454,10.0650132620098,18.2198810563653,6.25767552692195,6.39288643325826,5.194701113989,8.4365456795234,17.9237280376557,12.067476149179,7.07623723614289,3.99839526184301,22.380716189585,23.2201125477808,18.1862751103403,17.1803492332715,19.0502197623718,20.2419678050063,15.7418897260344,8.53721123438752,25.4370231660754,20.8016688184601,20.0584281546902,18.4124415239163,22.5218271872734,15.6713474934975,13.7874031393322,25.6754204195856,18.9597560574573,16.4702660553418,23.3014069504386,18.6413195281952,18.2930326785255,18.0062061461015,14.9149183418682,14.7573173810553,14.1925743856388,17.9051137457814,12.0723030629829,11.0927075248811,17.4433440908289,10.9992200932994,5.91802309684747,6.28659945928929,7.46470391989572,7.24714661306008,8.83217783969334,17.8024979416162,2.31293148088659,9.78467096655114,23.2484193083405,28.3328739669735,18.6857818917035,15.5296313959974,12.008414367623,11.223311940641,8.0669940462567,9.71723832871664,9.0480675168097,10.9426059622633,9.94316844307513,12.5834717211591,10.1584883441106,8.76221602319216,17.0701110857774,23.0781995471652,22.5415471346161,15.6811522440892,12.6069116658957,14.307707257625,9.29577095726582,7.52811754695971,6.59394656933774,6.04646103216823,4.44678940630723,32.7016407203544,22.9974024282448,27.658039823337,26.1689556591169,22.4294758569748,15.5321769586666,14.0971107350897,12.1601420081277,14.8263163121564,10.0637744569148,8.55924179637558,3.74445207737473,6.56705082662491,5.74071723270119,4.3419916922703,7.57488079683079,28.6132031773432,29.6596257124487,24.6130374374023,21.8261930908307,13.4005005953453,8.09348379012447,10.3420833364633,14.5024332577696,12.4020226203314,12.756381492599,6.22680595919804,9.67035898449015,7.66640010482011,10.5553898757491,4.89515115436839,6.39293554924747,5.79467167239938,10.2752377592187,9.61135830056066,16.2295595922909,5.30188947129183,22.7165917979705,14.055794794679,20.8960695800815,21.7461606136822,12.4767257486141,13.8707500086528,17.4068601720205,13.151513606009,18.9738133414331,8.9969968598106,11.2132667314532,21.0117412327361,17.2660176914791,8.90838664051691,3.98235415019888,24.7636248878081,20.5580018736031,11.8821200246216,9.7449624650655,8.9156192903739,9.56184684722418,14.1778154496227,13.1904030002347,8.53299246426703,8.4334886859999,6.18813259489121,10.2131881726136,19.6266592494128,15.781759421496,18.0043109426538,12.945837055886,11.9507107793387,16.1258040190079,10.0473433207818,13.8456307757589,7.20229040936989,3.96951116498931,8.07942639413252,10.4951877352339,19.1795101271536,14.5634259683826,13.459553779095,11.9507143018239,10.9400928186201,16.5744754373917,20.432299928359,22.5937323391048,24.4878994106098,21.597687979922,23.5641518402718,18.6976272993241,15.954465564897,13.4053974590291,3.81868247206045,20.8781755763549,20.3319467126849,18.0368919172408,14.2180041289839,10.0446779323242,15.6442641806392,9.09188012978695,4.4498510137285,7.64728342421578,3.72803587852155,18.6018669765783,27.5110444720921,24.8187735685646,24.306398543006,17.9532154634046,19.2609983059487,16.6647278876971,20.4420884205002,15.938620352708,24.3999962034266,12.3852902690882,21.8047673233443,24.3270258348197,24.4452078052289,28.0628977632037,29.002324698132,25.2325320572206,32.5729668199116,26.5841148914239,31.9053981836147,32.1592724084099,28.432984208589,23.4873492582803,30.3067301167038,23.7260111428585,4.98806843953465,36.8496682600947,35.5266872173524,28.0367309328011,6.18206700903009,8.44571139530319,8.79127796482872,9.00347192132076,3.51100472824754,6.21227026878773,6.90487854760765,6.87474616127276,4.29632955859219,7.53590771747707,8.3093328712867,8.77529250301348,9.45674526770863,8.15656336171568,10.8729665467882,27.1922850670543,23.1434426572598,17.9270286041841,16.7743634777123,18.6555714738904,11.5821410323509,14.0015438515018,11.743998262617,9.94849549734627,14.1510438587727,10.3926512954998,9.99719609346204,14.1398676279522,12.3568544141398,14.4737381768145,11.9073422820768,15.4126153506658,14.4681915347779,11.1263193216893,12.217510371155,12.6861623382604,12.0683548188349,14.0677352068919,13.5172167468066,14.3046258231303,12.7768057916432,16.8293735042951,11.8381370147029,15.2100607507365,10.661703161497,14.7107422473976,12.8055827088233,15.1415485972785,13.789378865551,13.1176495467176,12.7403394748352,13.5680332898337,8.59484216193193,9.94699326757986,12.5737108898124,10.8977882741598 | ||
|short_description=p1@Nup107 | |short_description=p1@Nup107 | ||
}} | }} |
Latest revision as of 15:47, 25 September 2015
Short description: | p1@Nup107 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Nup107_5end |
Coexpression cluster: | MCL_coexpression_mm9:151 |
Association with transcript: | 0bp_to_ENSMUST00000064848, ENSMUST00000167943, NM_134010, uc007hdo.1, uc007hdp.1, uc007hdq.1, uc011xnq.1_5end |
EntrezGene: | Nup107 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hemopoietic organ | 3.70e-11 | 29 |
immune organ | 3.70e-11 | 29 |
thymus | 3.25e-09 | 23 |
neck | 3.25e-09 | 23 |
respiratory system epithelium | 3.25e-09 | 23 |
hemolymphoid system gland | 3.25e-09 | 23 |
pharyngeal epithelium | 3.25e-09 | 23 |
thymic region | 3.25e-09 | 23 |
pharyngeal gland | 3.25e-09 | 23 |
entire pharyngeal arch endoderm | 3.25e-09 | 23 |
thymus primordium | 3.25e-09 | 23 |
early pharyngeal endoderm | 3.25e-09 | 23 |
segment of respiratory tract | 1.98e-08 | 27 |
pharynx | 3.81e-08 | 24 |
upper respiratory tract | 3.81e-08 | 24 |
chordate pharynx | 3.81e-08 | 24 |
pharyngeal arch system | 3.81e-08 | 24 |
pharyngeal region of foregut | 3.81e-08 | 24 |
gland of gut | 4.54e-08 | 24 |
anterior region of body | 5.14e-08 | 43 |
hematopoietic system | 1.35e-07 | 45 |
blood island | 1.35e-07 | 45 |
mixed endoderm/mesoderm-derived structure | 4.01e-07 | 35 |