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FFCP PHASE1:Mm9::chr3:67234023..67234106,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=28030
|EntrezGene=28030
|HGNC=
|HGNC=
|MCL_coexpression_id=79
|MCL_coexpression_id=79
|TSSclassifier=NA
|UniProt=E0CXN8,Q8K0D5
|UniProt=E0CXN8,Q8K0D5
|association_with_transcript=0bp_to_ENSMUST00000161009,NM_138591,uc008plm.2_5end
|association_with_transcript=0bp_to_ENSMUST00000161009,NM_138591,uc008plm.2_5end
|cluster_id=chr3:67234023..67234106,+
|description=CAGE_peak_1_at_Gfm1_5end
|description=CAGE_peak_1_at_Gfm1_5end
|id=chr3:67234023..67234106,+
|id=chr3:67234023..67234106,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0003914!3.24e-10!47;UBERON:0005172!1.40e-08!49;UBERON:0005173!1.40e-08!49;UBERON:0002417!1.40e-08!49;UBERON:0000916!1.40e-08!49;UBERON:0009854!3.16e-08!23;UBERON:0009856!3.16e-08!23;UBERON:0002365!8.29e-08!25;UBERON:0002330!8.29e-08!25;UBERON:0002107!8.53e-08!22;UBERON:0007499!8.53e-08!22;UBERON:0006925!8.53e-08!22;UBERON:0009497!8.53e-08!22;UBERON:0000015!8.53e-08!22;UBERON:0002423!8.53e-08!22;UBERON:0006235!8.53e-08!22;UBERON:0008835!8.53e-08!22;UBERON:0003894!8.53e-08!22;UBERON:0004161!8.53e-08!22;UBERON:0008836!8.53e-08!22;UBERON:0007100!9.18e-07!18;UBERON:0000948!9.18e-07!18;UBERON:0005498!9.18e-07!18;UBERON:0004140!9.18e-07!18;UBERON:0009881!9.18e-07!18;UBERON:0004141!9.18e-07!18;UBERON:0003084!9.18e-07!18;UBERON:0007005!9.18e-07!18;UBERON:0004139!9.18e-07!18;UBERON:0004291!9.18e-07!18
|ontology_enrichment_uberon=UBERON:0003914!3.24e-10!47;UBERON:0005172!1.40e-08!49;UBERON:0005173!1.40e-08!49;UBERON:0002417!1.40e-08!49;UBERON:0000916!1.40e-08!49;UBERON:0009854!3.16e-08!23;UBERON:0009856!3.16e-08!23;UBERON:0002365!8.29e-08!25;UBERON:0002330!8.29e-08!25;UBERON:0002107!8.53e-08!22;UBERON:0007499!8.53e-08!22;UBERON:0006925!8.53e-08!22;UBERON:0009497!8.53e-08!22;UBERON:0000015!8.53e-08!22;UBERON:0002423!8.53e-08!22;UBERON:0006235!8.53e-08!22;UBERON:0008835!8.53e-08!22;UBERON:0003894!8.53e-08!22;UBERON:0004161!8.53e-08!22;UBERON:0008836!8.53e-08!22;UBERON:0007100!9.18e-07!18;UBERON:0000948!9.18e-07!18;UBERON:0005498!9.18e-07!18;UBERON:0004140!9.18e-07!18;UBERON:0009881!9.18e-07!18;UBERON:0004141!9.18e-07!18;UBERON:0003084!9.18e-07!18;UBERON:0007005!9.18e-07!18;UBERON:0004139!9.18e-07!18;UBERON:0004291!9.18e-07!18
|ontology_enrichment_uberon_v019_2=UBERON:0003914,3.24e-10,47;UBERON:0005172,1.40e-08,49;UBERON:0005173,1.40e-08,49;UBERON:0002417,1.40e-08,49;UBERON:0000916,1.40e-08,49;UBERON:0009854,3.16e-08,23;UBERON:0009856,3.16e-08,23;UBERON:0002365,8.29e-08,25;UBERON:0002330,8.29e-08,25;UBERON:0002107,8.53e-08,22;UBERON:0007499,8.53e-08,22;UBERON:0006925,8.53e-08,22;UBERON:0009497,8.53e-08,22;UBERON:0000015,8.53e-08,22;UBERON:0002423,8.53e-08,22;UBERON:0006235,8.53e-08,22;UBERON:0008835,8.53e-08,22;UBERON:0003894,8.53e-08,22;UBERON:0004161,8.53e-08,22;UBERON:0008836,8.53e-08,22;UBERON:0007100,9.18e-07,18;UBERON:0000948,9.18e-07,18;UBERON:0005498,9.18e-07,18;UBERON:0004140,9.18e-07,18;UBERON:0009881,9.18e-07,18;UBERON:0004141,9.18e-07,18;UBERON:0003084,9.18e-07,18;UBERON:0007005,9.18e-07,18;UBERON:0004139,9.18e-07,18;UBERON:0004291,9.18e-07,18
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431361323,26.838169660744,30.1334900892826,32.4086858822427,31.0074840519572,41.5382186865248,48.6828854222229,57.5863072364865,51.4571443968418,52.1925022993018,50.1686715428929,34.3888055901151,30.2789037536489,30.5288365700155,32.8065951633437,33.2843567216833,34.8550998777889,35.4155926775544,35.4424584158903,49.7663288901572,55.0137311952523,32.8651565453305,31.4224083699755,31.2241309781075,40.4053759460943,34.7311789594914,36.9547319893153,33.5345304160713,37.2177608479935,32.814096233148,40.6182279471149,34.0792505762521,34.0128003781736,31.2688485331071,29.3361024475738,111.324618355069,54.1645726232718,50.2397597013064,55.56980801651,31.6830934212792,33.032115679408,31.8683826225041,36.2282560643621,27.586465721945,43.4858918815141,41.8895965221531,40.1026859407578,39.1825255743608,39.0497036269266,35.5035131773159,33.7511250115903,51.3366171675611,47.1268105343573,37.278742446131,25.84304954846,35.1141888592907,29.1954465839569,31.8469799359465,28.7170032800336,32.3564574872025,48.4497866607521,49.0363436228568,53.5935080018332,50.5394423527595,44.6123567806822,61.1149346090887,44.1051500183146,50.1957194854175,48.5329712674932,46.6767817457412,47.9761109411702,47.4556682340714,42.8569336835439,44.454073880588,41.1443102862498,41.7068144474443,45.0644399000437,50.2898601547857,46.8664714468346,50.1764624797642,57.8052394277961,46.5633389244982,49.7043056675854,50.5028044491965,56.4702686271069,50.6313039410396,38.8769491011205,48.1853576088354,47.0692130793985,36.4723443789401,43.0434159539551,47.7013739987222,49.1611013416927,49.633069301891,55.4164127132807
|phase1_expression=18.0968197228417,21.6364752736404,20.0199665331396,31.4562779759103,33.5600139064053,24.5103736991359,34.1074455269467,20.9179783975354,39.4208422024667,44.2381954748568,63.6930841798879,52.888941413908,28.0769197087177,21.2431577878164,42.9711592742205,43.5321824888126,27.2829132469977,29.9689057090326,27.1486578539363,15.2780274647291,32.911753288464,29.1915396530603,31.3439746966722,32.7984466726484,29.1349786955306,19.5238867799107,24.9841957772263,24.5637205261914,20.9025761402011,21.4225610295941,27.7163138319131,43.8171164687146,36.9038872550742,31.6963362030877,53.7264012737371,52.1976786425666,49.8173229280181,17.1597968602132,25.7840663692854,26.1761871986899,8.2352408324342,10.2456822743767,16.0218416500281,25.1793635951155,25.8511174609762,21.8420635072401,12.5182615095686,26.381043922034,24.6048524662608,21.1928589990969,21.6978953519312,40.250718022192,20.972825757217,19.5847778343063,22.5182845425451,20.8380143189117,24.3553423947943,23.2052441524849,23.2663929988537,25.9205579843296,25.3532561402472,16.9422266034566,14.2287167377782,13.0485459005803,11.8663963508037,9.9467216092454,11.3848041996994,10.373894243682,27.4777472617466,23.4910332697142,24.1873705554089,34.5637691128602,28.7129103237098,22.7832886539815,21.5652309791032,26.6573448116906,42.9451935897616,42.1368215681119,42.5490097119794,25.0583946687368,20.1272815925301,25.0038417867245,43.5525478442154,34.3285192119325,35.6019917319968,32.7037729875771,25.6269025438385,22.1815340532108,37.9388228599252,37.5590653730724,29.8560423362728,88.6236593290828,44.1981366910038,83.6539947038617,123.457519315057,121.415286403378,68.9582102846902,16.1908806449155,15.5871602761721,13.4269038313929,23.6616945224823,19.2489716121477,28.028576367731,21.3320010945999,34.6385665617943,27.6162253367857,30.8369911459018,65.5415469587404,45.0551917546079,50.0250008648459,40.5955664632758,37.7537193107055,49.1211009155405,50.6428072256812,46.9178941471462,77.1592870764207,25.9554716121093,111.630703542172,52.1920225650426,53.7065941825398,58.9646854289251,59.1547808824971,59.6453635897991,50.9438586800092,44.6121485512659,39.5958435573317,31.7510079940689,26.3957201637099,30.4968544975355,49.880282921806,39.8025524452205,30.9109706197646,46.2372691711455,55.7459696980121,45.7133698031032,49.8080677618016,29.3297367888911,37.9441260360784,24.0086620511991,55.7670918099156,28.7566178947575,27.1284483231498,21.9675798362526,27.5789816639359,31.0246436130055,34.2063633160549,32.5144984222259,53.0341910014982,31.0417909823293,36.6865795525569,30.6154956045271,33.0985555965638,28.9169139194622,31.6909471535172,27.7805884150724,26.8696260204966,25.2796747432765,25.9921386185862,34.0996199274711,79.3291708810972,77.3935997937618,90.0310307305074,84.5178706039201,85.5924408101207,87.4694530071435,104.407741192933,121.259577432628,119.801241268716,160.445853665643,145.452373174078,189.133532670481,178.802584621181,187.715348573848,193.659862271216,48.5769781183134,32.929475961371,48.5715610986183,83.3019284990165,29.4337785738623,30.6552406855779,40.077780471171,40.3367049246685,38.9161576728523,35.5721920830486,47.4529061544512,38.8689533148666,45.7430080016491,39.9902508802713,44.6467759502785,49.4350674759822,49.7117514711797,46.7981992147763,27.881181440103,30.7328498920171,47.3372489826938,42.3594761918254,44.8030245357215,53.0928156569711,67.2836755002098,101.260561514007,105.189147653721,120.682426315521,125.103008630777,48.0513904462351,52.284692700112,48.7950783875133,47.4692684049097,42.2060029566729,37.6846260636501,30.4957905697859,56.0987884641622,81.5447397168602,89.1362880469598,86.3366998590928,90.8029628763371,148.011222477007,157.152134245195,168.372788955815,30.2995231873232,40.1721792953428,35.2004349114776,35.1372327554639,32.8566347603903,30.8211513692941,25.9467568565755,29.6603144743854,30.7388531007072,28.1260155853944,33.3260466494148,30.3147132224115,29.701816880934,29.9423551263729,21.1107797514981,20.668415985111,40.324670387561,35.043966780701,63.25693245519,66.1073912380026,33.6066638022185,132.042294927887,24.9251493338843,14.8366722832723,27.1433481143327,24.3748173911603,20.7202766896627,20.3815102167959,19.4309136803949,21.3346776275258,18.9738133414331,42.4144137676785,38.039942835816,24.5730533060812,32.4145049113616,30.189532503974,39.8235415019888,28.1625537939778,36.5811503927349,30.7426280002114,27.4630760379119,31.3583850902806,34.3709629913734,34.1721705708855,39.5712090007041,33.8159330991323,46.3841877729995,46.4109944616841,29.2778060948258,28.0895306688844,31.8222362105576,29.7928478693913,30.1478397191865,26.2202161875044,26.4923923169415,21.6170113871366,39.4248469547033,26.4790088579775,26.6839361646504,33.307023094179,31.9699564857893,41.1937277259305,34.8567244489158,43.3331975326962,46.3454530241463,63.7863038916153,35.1994014443577,30.9580301944834,36.4833218918332,45.5851665951352,46.7494258805906,45.7556346413045,34.3356428587588,30.9292709635284,29.7129943679511,58.2349076989219,31.475431361323,26.838169660744,30.1334900892826,32.4086858822427,31.0074840519572,41.5382186865248,48.6828854222229,57.5863072364865,51.4571443968418,52.1925022993018,50.1686715428929,34.3888055901151,30.2789037536489,30.5288365700155,32.8065951633437,33.2843567216833,34.8550998777889,35.4155926775544,35.4424584158903,49.7663288901572,55.0137311952523,32.8651565453305,31.4224083699755,31.2241309781075,40.4053759460943,34.7311789594914,36.9547319893153,33.5345304160713,37.2177608479935,32.814096233148,40.6182279471149,34.0792505762521,34.0128003781736,31.2688485331071,29.3361024475738,111.324618355069,54.1645726232718,50.2397597013064,55.56980801651,31.6830934212792,33.032115679408,31.8683826225041,36.2282560643621,27.586465721945,43.4858918815141,41.8895965221531,40.1026859407578,39.1825255743608,39.0497036269266,35.5035131773159,33.7511250115903,51.3366171675611,47.1268105343573,37.278742446131,25.84304954846,35.1141888592907,29.1954465839569,31.8469799359465,28.7170032800336,32.3564574872025,48.4497866607521,49.0363436228568,53.5935080018332,50.5394423527595,44.6123567806822,61.1149346090887,44.1051500183146,50.1957194854175,48.5329712674932,46.6767817457412,47.9761109411702,47.4556682340714,42.8569336835439,44.454073880588,41.1443102862498,41.7068144474443,45.0644399000437,50.2898601547857,46.8664714468346,50.1764624797642,57.8052394277961,46.5633389244982,49.7043056675854,50.5028044491965,56.4702686271069,50.6313039410396,38.8769491011205,48.1853576088354,47.0692130793985,36.4723443789401,43.0434159539551,47.7013739987222,49.1611013416927,49.633069301891,55.4164127132807
|short_description=p1@Gfm1
|short_description=p1@Gfm1
}}
}}

Latest revision as of 16:04, 25 September 2015

Short description:p1@Gfm1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gfm1_5end
Coexpression cluster:MCL_coexpression_mm9:79
Association with transcript: 0bp_to_ENSMUST00000161009, NM_138591, uc008plm.2_5end
EntrezGene:Gfm1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gfm1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G718.10
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I521.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I620.02
CD326+ enterocyte, pool1.CNhs13542.11848-124I331.46
CD326+ enterocyte, pool2.CNhs13197.11849-124I433.56
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I724.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I834.11
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E920.92
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E739.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F244.24
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E663.69
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F152.89
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E428.08
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E821.24
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A142.97
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A343.53
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A527.28
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A229.97
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A427.15
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A615.28
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A332.91
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H229.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I931.34
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D132.80
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D229.13
GP2+ M cell, pool1.CNhs13228.11845-124H919.52
GP2+ M cell, pool2.CNhs13231.11846-124I124.98
GP2+ M cell, pool3.CNhs13240.11847-124I224.56
Ileum epithelium, pool1.CNhs13199.10252-104B920.90
Ileum epithelium, pool2.CNhs13232.10253-104C121.42
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C827.72
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I343.82
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G636.90
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E931.70
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F553.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F652.20
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F749.82
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G817.16
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H125.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H326.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G98.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H210.25
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H416.02
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D825.18
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D925.85
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B321.84
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B712.52
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C226.38
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B824.60
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C321.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C421.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C440.25
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A220.97
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I919.58
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A122.52
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C120.84
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E124.36
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C523.21
Mouse Granule cells, donor1.CNhs12131.11713-123C323.27
Mouse Granule cells, donor2.CNhs12357.11731-123E325.92
Mouse Granule cells, donor3.CNhs12108.11636-122C725.35
Mouse Meningeal cells, donor1.CNhs12132.11716-123C616.94
Mouse Meningeal cells, donor3.CNhs12109.11639-122D114.23
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C713.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E711.87
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.95
Mouse Microglia, donor1.CNhs12629.11718-123C811.38
Mouse Microglia, donor2.CNhs12634.11736-123E810.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D527.48
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F523.49
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D924.19
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F134.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D528.71
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D222.78
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F221.57
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D626.66
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D342.95
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F342.14
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D742.55
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D425.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F420.13
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D825.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E443.55
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E534.33
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I635.60
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D632.70
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F625.63
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E122.18
Mouse Schwann, donor1.CNhs12507.11728-123D937.94
Mouse Schwann, donor2.CNhs12573.11746-123F937.56
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G329.86
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F788.62
Mouse hepatocyte, donor1.CNhs13078.11714-123C444.20
Mouse hepatocyte, donor3.CNhs12615.11637-122C883.65
Mouse hepatocyte, donor6.CNhs13090.11822-124F4123.46
Mouse hepatocyte, donor8.CNhs13091.11824-124F6121.42
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A768.96
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I716.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E315.59
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I813.43
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G623.66
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H119.25
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I828.03
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B621.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G134.64
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G227.62
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G330.84
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B665.54
accessory axillary lymph node, adult.CNhs10475.1063-29H945.06
adrenal gland, adult.CNhs10508.49-24D750.03
adrenal gland, embryo E14.CNhs11038.406-44C540.60
adrenal gland, embryo E16.CNhs11004.1254-43D637.75
adrenal gland, embryo E17.CNhs11043.1263-45I149.12
adrenal gland, embryo E18.CNhs11026.1262-18F550.64
adrenal gland, neonate N00.CNhs11191.1311-23C146.92
adrenal gland, neonate N25.CNhs11223.1377-27I377.16
amnion, adult pregnant day17.5.CNhs10488.583-22A825.96
aorta, adult.CNhs10498.46-23H1111.63
bone (os femoris), adult.CNhs10483.56-12G252.19
bone (os femoris), neonate N02.CNhs11227.1985-43F553.71
bone (os femoris), neonate N16.CNhs11225.1525-43A658.96
bone (os femoris), neonate N20.CNhs11195.1350-25C359.15
cecum, adult.CNhs10467.37-13H459.65
cerebellum, adult.CNhs10494.15-8B250.94
cerebellum, neonate N30.CNhs11135.1395-42I244.61
colon, adult.CNhs10468.36-18H739.60
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C731.75
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D126.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D430.50
corpora quadrigemina, adult.CNhs10501.16-22A449.88
corpus striatum, adult.CNhs10487.19-21D839.80
corpus striatum, neonate N00.CNhs11226.630-43F130.91
cortex, adult.CNhs10473.12-14D546.24
cortex, neonate N30.CNhs11107.1392-42F255.75
diencephalon, adult.CNhs10482.20-12F245.71
diencephalon, neonate N30.CNhs11201.1388-42B249.81
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B129.33
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A237.94
epididymis, adult.CNhs10490.58-23B224.01
eyeball, adult.CNhs10484.31-12G455.77
eyeball, embryo E12.CNhs11016.345-16C628.76
eyeball, embryo E14.CNhs10521.399-16E227.13
eyeball, embryo E15.CNhs10593.426-16C921.97
eyeball, embryo E17.CNhs11023.1261-18D427.58
eyeball, neonate N00.CNhs11207.633-15C631.02
eyeball, neonate N01.CNhs11140.1532-43E734.21
eyeball, neonate N02.CNhs11205.1551-44G832.51
eyeball, neonate N16.CNhs11188.777-19A253.03
forelimb, embryo E11.CNhs10596.335-25E231.04
forelimb, embryo E12.CNhs10600.359-14H236.69
forelimb, embryo E13.CNhs10589.384-1E230.62
forelimb, embryo E14.CNhs10577.413-26A833.10
forelimb, embryo E15.CNhs11007.437-20E728.92
forelimb, embryo E17.CNhs10598.1517-43C431.69
forelimb, embryo E18.CNhs11008.1520-43B527.78
gonad, embryo E13.CNhs11044.1564-45I626.87
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C825.28
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D225.99
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D534.10
heart, embryo E11.CNhs10586.331-24E979.33
heart, embryo E12.CNhs11015.353-12F577.39
heart, embryo E13.CNhs11013.376-3I990.03
heart, embryo E14.CNhs10597.403-26D484.52
heart, embryo E15.CNhs11017.431-16C885.59
heart, embryo E16.CNhs11021.457-17C687.47
heart, embryo E17.CNhs11025.479-18E5104.41
heart, embryo E18.CNhs11030.1283-20G3121.26
heart, neonate N00.CNhs11213.639-21E3119.80
heart, neonate N03.CNhs11221.1349-25I2160.45
heart, neonate N10.CNhs11118.749-24G1145.45
heart, neonate N16.CNhs11209.782-15G1189.13
heart, neonate N20.CNhs11127.821-26I6178.80
heart, neonate N25.CNhs11196.1351-25D3187.72
heart, neonate N30.CNhs11202.1390-42D2193.66
hippocampus, adult.CNhs10478.13-16E848.58
hippocampus, neonate N00.CNhs11228.627-43G132.93
intestinal mucosa, adult.CNhs10506.860-29I348.57
intestine, adult.CNhs10496.178-9A383.30
intestine, embryo E12.CNhs11019.1251-16I529.43
intestine, embryo E13.CNhs11010.381-16D530.66
intestine, embryo E15.CNhs10602.976-16D840.08
intestine, embryo E16.CNhs10585.463-22H440.34
intestine, embryo E17.CNhs10582.482-18D338.92
intestine, embryo E18.CNhs10526.1289-20F735.57
intestine, neonate N00.CNhs11126.644-26D147.45
intestine, neonate N01.CNhs11192.1322-23E938.87
intestine, neonate N06.CNhs11102.688-20B845.74
intestine, neonate N07.CNhs11095.720-20F239.99
intestine, neonate N10.CNhs11098.755-23A544.65
intestine, neonate N20.CNhs11187.827-18D149.44
intestine, neonate N25.CNhs11121.1352-25E349.71
intestine, neonate N30.CNhs11131.1384-42G146.80
kidney, embryo E14.CNhs10606.411-4I927.88
kidney, embryo E15.CNhs10997.434-16F830.73
kidney, embryo E16.CNhs10584.464-22A547.34
kidney, embryo E17.CNhs11028.483-18I242.36
kidney, embryo E18.CNhs11001.1288-20C744.80
kidney, neonate N00.CNhs11214.646-21G753.09
kidney, neonate N10.CNhs11206.758-6D567.28
kidney, neonate N20.CNhs11113.832-19I1101.26
kidney, neonate N25.CNhs11122.1353-25F3105.19
kidney, neonate N30.CNhs11203.1385-42H1120.68
liver, adult pregnant day01.CNhs10466.508-5B2125.10
liver, embryo E12.CNhs10601.355-15F848.05
liver, embryo E13.CNhs10524.378-3H652.28
liver, embryo E14.CNhs10594.409-16E148.80
liver, embryo E15.CNhs10520.433-16D747.47
liver, embryo E16.CNhs10523.462-17F542.21
liver, embryo E17.CNhs10510.481-18A337.68
liver, embryo E18.CNhs10579.499-43G430.50
liver, neonate N00.CNhs11117.641-24F456.10
liver, neonate N03.CNhs11123.1345-25G281.54
liver, neonate N06.CNhs11101.684-20A889.14
liver, neonate N07.CNhs11103.716-20H286.34
liver, neonate N10.CNhs11115.751-24B990.80
liver, neonate N20.CNhs11220.823-25A3148.01
liver, neonate N25.CNhs11198.1368-26H1157.15
liver, neonate N30.CNhs11106.1382-42D1168.37
lung, adult.CNhs10474.28-22B130.30
lung, embryo E12.CNhs10522.354-16G240.17
lung, embryo E14.CNhs10604.404-26F835.20
lung, embryo E15.CNhs11020.432-17C535.14
lung, embryo E16.CNhs10998.458-17B632.86
lung, embryo E17.CNhs10605.480-44A630.82
lung, embryo E18.CNhs10583.1287-20I625.95
lung, neonate N00.CNhs11224.640-42C629.66
lung, neonate N06.CNhs11212.683-20E530.74
lung, neonate N07.CNhs11111.715-19A328.13
lung, neonate N10.CNhs11219.750-23E633.33
lung, neonate N20.CNhs11109.822-18A430.31
lung, neonate N25.CNhs11119.1359-25C729.70
lung, neonate N30.CNhs11133.1394-42H229.94
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A121.11
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A120.67
mammary gland, adult lactating day02.CNhs10480.595-22B640.32
mammary gland, adult pregnant day19.CNhs10476.588-5H235.04
medulla oblongata, adult.CNhs10477.17-12C263.26
medulla oblongata, neonate N30.CNhs11200.1396-42A366.11
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C733.61
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C2132.04
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E124.93
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E214.84
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E327.14
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D724.37
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D820.72
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D920.38
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D419.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D521.33
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D618.97
olfactory brain, adult.CNhs10489.18-22I942.41
ovary, adult.CNhs10507.91-2I738.04
ovary, embryo E18.CNhs11040.505-44H724.57
ovary, neonate N00.CNhs11217.1299-22I432.41
oviduct, adult pregnant day01.CNhs10500.988-6G630.19
pancreas, adult.CNhs10486.34-16E439.82
pancreas, embryo E14.CNhs11012.405-44F428.16
pancreas, embryo E15.CNhs11042.1556-45F236.58
pancreas, embryo E16.CNhs11003.460-26E530.74
pancreas, embryo E17.CNhs10599.1558-45G327.46
pancreas, embryo E18.CNhs10580.1535-43I731.36
pancreas, neonate N00.CNhs11105.645-26G934.37
pancreas, neonate N01.CNhs11138.1531-43D734.17
pancreas, neonate N02.CNhs11139.1539-43D839.57
pancreas, neonate N16.CNhs11136.787-43B633.82
pancreas, neonate N25.CNhs11094.1555-45E246.38
pancreas, neonate N30.CNhs11182.1548-44H546.41
pituitary gland, adult.CNhs10493.21-1G829.28
pituitary gland, embryo E12.CNhs11018.346-16E628.09
pituitary gland, embryo E13.CNhs11009.370-44C731.82
pituitary gland, embryo E14.CNhs11037.398-44A529.79
pituitary gland, embryo E15.CNhs10592.427-16B930.15
pituitary gland, embryo E16.CNhs11036.449-43F626.22
pituitary gland, embryo E17.CNhs11039.1265-44F526.49
pituitary gland, neonate N00.CNhs11190.1308-22E921.62
placenta, adult pregnant day10.CNhs10472.539-13I739.42
placenta, adult pregnant day17.CNhs10464.577-18G326.48
prostate, adult.CNhs10470.859-1F826.68
skin, adult.CNhs10492.30-1C333.31
skin, neonate N00.CNhs11124.650-25G431.97
skin, neonate N03.CNhs11215.662-22H341.19
skin, neonate N06.CNhs11097.693-20I534.86
skin, neonate N10.CNhs11108.762-6C443.33
small intestine, neonate N16.CNhs11114.790-21I146.35
spinal cord, adult.CNhs10505.24-13C963.79
spleen, adult.CNhs10465.25-2G235.20
spleen, embryo E16.CNhs11035.461-43C130.96
spleen, embryo E18.CNhs11011.1271-21F236.48
spleen, neonate N10.CNhs11116.752-24D145.59
spleen, neonate N20.CNhs11112.824-19H146.75
spleen, neonate N25.CNhs11099.1354-25G345.76
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C634.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C930.93
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D329.71
stomach, adult.CNhs10503.33-1H658.23
stomach, embryo E12.CNhs10588.356-43E331.48
stomach, embryo E15.CNhs10603.1252-16G826.84
stomach, embryo E16.CNhs11022.459-17D430.13
stomach, embryo E17.CNhs11006.1035-18D532.41
stomach, embryo E18.CNhs10999.1286-20C631.01
stomach, neonate N03.CNhs11193.1340-24B841.54
stomach, neonate N07.CNhs11210.718-18A948.68
stomach, neonate N25.CNhs11104.1355-25E457.59
stomach, neonate N30.CNhs11134.1386-42I151.46
submandibular gland, adult.CNhs10469.59-29C152.19
testis, adult.CNhs10504.57-7G550.17
testis, embryo E13.CNhs11031.389-23F534.39
testis, embryo E15.CNhs11034.443-27C530.28
testis, embryo E16.CNhs11033.470-26G530.53
testis, embryo E17.CNhs11029.486-18I532.81
testis, embryo E18.CNhs11027.503-18G533.28
testis, neonate N00.CNhs11189.1300-22B734.86
testis, neonate N07.CNhs11222.726-26I435.42
testis, neonate N10.CNhs11204.763-44D935.44
testis, neonate N20.CNhs11110.839-18H349.77
testis, neonate N30.CNhs11130.1391-42E255.01
thymus, adult.CNhs10471.38-12B532.87
thymus, embryo E14.CNhs11041.402-44I431.42
thymus, embryo E15.CNhs11005.430-45I231.22
thymus, embryo E16.CNhs11002.456-26C540.41
thymus, embryo E17.CNhs10581.478-18C134.73
thymus, embryo E18.CNhs10595.1273-19G436.95
thymus, neonate N02.CNhs11181.1541-43F833.53
thymus, neonate N03.CNhs11137.2104-43C737.22
thymus, neonate N06.CNhs11197.681-26C432.81
thymus, neonate N07.CNhs11211.713-19D340.62
thymus, neonate N10.CNhs11194.748-24E434.08
thymus, neonate N20.CNhs11186.820-7A234.01
thymus, neonate N25.CNhs11125.1362-25G731.27
thymus, neonate N30.CNhs11132.1393-42G229.34
tongue, adult.CNhs10499.32-1B4111.32
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H354.16
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F750.24
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G555.57
urinary bladder, adult.CNhs10481.879-12E431.68
uterus, adult pregnant day19.CNhs10497.590-15F533.03
uterus, adult.CNhs10509.92-27E531.87
vagina, adult.CNhs10502.89-27D536.23
vesicular gland, adult.CNhs10491.51-27F827.59
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A143.49
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A241.89
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A340.10
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D739.18
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A439.05
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A535.50
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A633.75
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A751.34
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A847.13
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A937.28
whole body, embryo E11.CNhs11014.324-5I825.84
whole body, embryo E12.CNhs10587.857-27C935.11
whole body, embryo E13.CNhs10512.372-23H229.20
whole body, embryo E14.5.CNhs10578.420-27D231.85
whole body, embryo E14.CNhs10519.395-14B128.72
whole body, embryo E16.CNhs10514.453-14F232.36
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G548.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G549.04
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G553.59
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G550.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G544.61
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G561.11
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G544.11
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G550.20
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G548.53
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G546.68
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G547.98
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G547.46
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G542.86
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G544.45
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G541.14
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G541.71
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G545.06
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G550.29
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G546.87
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G550.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G557.81
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G546.56
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G549.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G550.50
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G556.47
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G550.63
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G538.88
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G548.19
whole body, embryo E17.5.CNhs10513.490-9F947.07
whole body, embryo E17.CNhs10517.475-3I536.47
whole body, embryo E18.CNhs10516.493-3B343.04
whole body, neonate N00.CNhs10525.657-19C247.70
whole body, neonate N01.CNhs10576.659-23C649.16
whole body, neonate N06.CNhs10515.692-21D149.63
whole body, neonate N10.CNhs10518.761-6B455.42





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
epithelial tube3.24e-1047
abdomen element1.40e-0849
abdominal segment element1.40e-0849
abdominal segment of trunk1.40e-0849
abdomen1.40e-0849
digestive tract diverticulum3.16e-0823
sac3.16e-0823
exocrine gland8.29e-0825
exocrine system8.29e-0825
liver8.53e-0822
epithelial sac8.53e-0822
digestive gland8.53e-0822
epithelium of foregut-midgut junction8.53e-0822
anatomical boundary8.53e-0822
hepatobiliary system8.53e-0822
foregut-midgut junction8.53e-0822
hepatic diverticulum8.53e-0822
liver primordium8.53e-0822
septum transversum8.53e-0822
liver bud8.53e-0822
primary circulatory organ9.18e-0718
heart9.18e-0718
primitive heart tube9.18e-0718
primary heart field9.18e-0718
anterior lateral plate mesoderm9.18e-0718
heart tube9.18e-0718
heart primordium9.18e-0718
cardiac mesoderm9.18e-0718
cardiogenic plate9.18e-0718
heart rudiment9.18e-0718
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