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FFCP PHASE1:Mm9::chr3:68808633..68808653,+: Difference between revisions

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{{FFCP|EntrezGene=70099|HGNC=|MCL_coexpression_id=29|UniProt=Q8CG47|association_with_transcript=-6bp_to_ENSMUST00000042901_5end|description=CAGE_peak_9_at_Smc4_5end|id=chr3:68808633..68808653,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004177!3.40e-10!29;UBERON:0006562!5.25e-08!24;UBERON:0001557!5.25e-08!24;UBERON:0001042!5.25e-08!24;UBERON:0008814!5.25e-08!24;UBERON:0009145!5.25e-08!24;UBERON:0002370!5.94e-08!23;UBERON:0000974!5.94e-08!23;UBERON:0004807!5.94e-08!23;UBERON:0005058!5.94e-08!23;UBERON:0003351!5.94e-08!23;UBERON:0009113!5.94e-08!23;UBERON:0003295!5.94e-08!23;UBERON:0009722!5.94e-08!23;UBERON:0005562!5.94e-08!23;UBERON:0007690!5.94e-08!23;UBERON:0003408!3.04e-07!24;UBERON:0005057!3.32e-07!51;UBERON:0000490!5.69e-07!66;UBERON:0001048!5.76e-07!147;UBERON:0000072!9.67e-07!27|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.79e-11,23;UBERON:0000974,4.79e-11,23;UBERON:0004807,4.79e-11,23;UBERON:0005058,4.79e-11,23;UBERON:0003351,4.79e-11,23;UBERON:0009113,4.79e-11,23;UBERON:0003295,4.79e-11,23;UBERON:0009722,4.79e-11,23;UBERON:0005562,4.79e-11,23;UBERON:0007690,4.79e-11,23;UBERON:0004177,1.11e-10,29;UBERON:0005057,1.11e-10,29;UBERON:0006562,1.53e-10,24;UBERON:0003408,1.53e-10,24;UBERON:0001557,1.53e-10,24;UBERON:0001042,1.53e-10,24;UBERON:0008814,1.53e-10,24;UBERON:0009145,1.53e-10,24;UBERON:0000072,2.99e-09,27;UBERON:0000077,1.27e-08,35;UBERON:0002390,5.81e-08,45;UBERON:0003061,5.81e-08,45;UBERON:0000490,2.16e-07,66;UBERON:0002193,2.29e-07,48;UBERON:0002405,2.29e-07,48;UBERON:0000065,3.15e-07,41;UBERON:0001004,5.04e-07,42|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0.16787927191189,0,6.97265946584512,0.281577444303333,0.468129052643987,0.34243593645101,0,1.54080656938085,0.699363219351979,0.333109761815663,1.41732687172878,0.699561878128147,0.157731082679119,0.137114433605739,0,0.255129870453209,0.297872853602656,0.261199789138935,0.47997726838022,0,0,0,0.215471232685889,0.570070258369122,0.252030129759931,0,0,0,0,0,0.332469290716985,0.408338712524738,1.25559489221072,2.3440060335714,0.523523743973798,1.76469446409304,0,1.45653105909346,0.251793635951155,0.405507724878058,0.367093504323363,0.782391344348039,0.218025156380447,0,0,0,0,0.167782606057736,0.725362142011344,2.68875039313971,0.257259436035947,0.573066879877513,0.515672092277442,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0.122490799214954,0.191690942036473,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,0,0,1.3599426674155,0,0,0,0.140444420131752,0.511290967734173,0.259786004602869,0,0,0,0,0,0.216491041011214,0,0,0.22836775943812,0.517875767294343,0,0.693941307064543,0,0.230615497256059,0,0.117588707135705,0.251333182659351,0.247194967734374,0.144599356919912,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0.292780797011547,0,0.510914110417183,0.239630249011841,0,0.254140454146129,0.149790639404823,0,0,0.173824320192276,0,0,0,0.203678727700633,0.248813941220186,0,0,0.260240885925407,0,0,0.60281927134286,0.272145996605311,0,0.187403449119458,0,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0.59710280045548,0,0,0.568326998791185,0,0,0.180062061461015,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0.243206428637567,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0.330418782983798,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0,0.31399745568275,0.123397163921801,0.296452627087149,0.333690211432188,0.393117990226406,0.224862112384854,0.405720242777006,0,0.50925170356284,0,0.162135226775035,0,1.43768206527355,0,0,0.252578877947112,0.358794827043824,0,0,0,0.162964976442026,0,0.234690248288502,0.502518772325447,0.238043640886014,1.36593553500459,0.472905432318573,0,0,0.327726629431476,0,0.289298117163023,0,0,0,0.551873492609465,0.160550589987792,0,0.163934945376675,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0.651547837414304,0.164970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.36012218806262,0,0,0.177340233642274,0,0.493647061806363,0,0.23467170806371,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0,0.370850604021019,1.02522528478712,0.619160603889667,0.185194527369712,0.565105371014073,0.410082683163076,0.457556346413045,0.509935289981566,0.279902904647316,0.276399947608848,0,0.158167996790568,0,0,0,0.436725127492355,0.134864346384821,0.0826534557253359,0,0,0,1.12738587736838,0.598066184175915,1.15820943319968,0.583353565032143,0.645799117388655,0.337912250981556,0.704143431874524,0.13020438484395,0.314578033277133,0.241584120826006,0.576060012515731,1.58005560314089,0.202725215290164,0.513554785824136,0.77952493786677,0.895133478337407,0.596044064343795,1.32214994471966,0.886137163047463,1.51449674922221,1.295515713135,0.907435666231565,1.55932609183604,1.53938946624527,2.68816875017609,0.226730383615211,0.221985953374065,0.269141569828427,0.503653849092235,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0,0,0,0,0,0,0,0,0.256100609619477,0.17230640686684,0.476293691283074,0,0,0,0.147198920134397,0.342869252385415,0,0,0,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0,0,0.309873682371932,0,0,0.233931608445408,0.429742108096597,0.191288332068843,0,0.231867835620421|short_description=p9@Smc4}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=70099
|HGNC=
|MCL_coexpression_id=29
|TSSclassifier=NA
|UniProt=Q8CG47
|association_with_transcript=-6bp_to_ENSMUST00000042901_5end
|cluster_id=chr3:68808633..68808653,+
|description=CAGE_peak_9_at_Smc4_5end
|id=chr3:68808633..68808653,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004177!3.40e-10!29;UBERON:0006562!5.25e-08!24;UBERON:0001557!5.25e-08!24;UBERON:0001042!5.25e-08!24;UBERON:0008814!5.25e-08!24;UBERON:0009145!5.25e-08!24;UBERON:0002370!5.94e-08!23;UBERON:0000974!5.94e-08!23;UBERON:0004807!5.94e-08!23;UBERON:0005058!5.94e-08!23;UBERON:0003351!5.94e-08!23;UBERON:0009113!5.94e-08!23;UBERON:0003295!5.94e-08!23;UBERON:0009722!5.94e-08!23;UBERON:0005562!5.94e-08!23;UBERON:0007690!5.94e-08!23;UBERON:0003408!3.04e-07!24;UBERON:0005057!3.32e-07!51;UBERON:0000490!5.69e-07!66;UBERON:0001048!5.76e-07!147;UBERON:0000072!9.67e-07!27
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.79e-11,23;UBERON:0000974,4.79e-11,23;UBERON:0004807,4.79e-11,23;UBERON:0005058,4.79e-11,23;UBERON:0003351,4.79e-11,23;UBERON:0009113,4.79e-11,23;UBERON:0003295,4.79e-11,23;UBERON:0009722,4.79e-11,23;UBERON:0005562,4.79e-11,23;UBERON:0007690,4.79e-11,23;UBERON:0004177,1.11e-10,29;UBERON:0005057,1.11e-10,29;UBERON:0006562,1.53e-10,24;UBERON:0003408,1.53e-10,24;UBERON:0001557,1.53e-10,24;UBERON:0001042,1.53e-10,24;UBERON:0008814,1.53e-10,24;UBERON:0009145,1.53e-10,24;UBERON:0000072,2.99e-09,27;UBERON:0000077,1.27e-08,35;UBERON:0002390,5.81e-08,45;UBERON:0003061,5.81e-08,45;UBERON:0000490,2.16e-07,66;UBERON:0002193,2.29e-07,48;UBERON:0002405,2.29e-07,48;UBERON:0000065,3.15e-07,41;UBERON:0001004,5.04e-07,42
|phase1_expression=0.160148847104794,0,0,0,0.500895729946347,0.16787927191189,0,6.97265946584512,0.281577444303333,0.468129052643987,0.34243593645101,0,1.54080656938085,0.699363219351979,0.333109761815663,1.41732687172878,0.699561878128147,0.157731082679119,0.137114433605739,0,0.255129870453209,0.297872853602656,0.261199789138935,0.47997726838022,0,0,0,0.215471232685889,0.570070258369122,0.252030129759931,0,0,0,0,0,0.332469290716985,0.408338712524738,1.25559489221072,2.3440060335714,0.523523743973798,1.76469446409304,0,1.45653105909346,0.251793635951155,0.405507724878058,0.367093504323363,0.782391344348039,0.218025156380447,0,0,0,0,0.167782606057736,0.725362142011344,2.68875039313971,0.257259436035947,0.573066879877513,0.515672092277442,0,0.528990979272033,0,0,0,0,0,0,0,0,0,0.135005938331691,0,0,0,0.122490799214954,0.191690942036473,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0.151143120213571,0,0,1.3599426674155,0,0,0,0.140444420131752,0.511290967734173,0.259786004602869,0,0,0,0,0,0.216491041011214,0,0,0.22836775943812,0.517875767294343,0,0.693941307064543,0,0.230615497256059,0,0.117588707135705,0.251333182659351,0.247194967734374,0.144599356919912,0,0.161766849947409,0.441683036920787,0.484875253135222,0,0.292780797011547,0,0.510914110417183,0.239630249011841,0,0.254140454146129,0.149790639404823,0,0,0.173824320192276,0,0,0,0.203678727700633,0.248813941220186,0,0,0.260240885925407,0,0,0.60281927134286,0.272145996605311,0,0.187403449119458,0,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0,0.205782136407943,0.59710280045548,0,0,0.568326998791185,0,0,0.180062061461015,0,0,0.154267112887378,0,0.268273401399619,0,0,0,0.243206428637567,0.146199987425332,0,0.134206418760372,0,0.102904612379284,0.330418782983798,0,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0,0.198956472041151,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0.114248512609729,0,0,0,0.140271639780637,0.126473074248515,0,0.31399745568275,0.123397163921801,0.296452627087149,0.333690211432188,0.393117990226406,0.224862112384854,0.405720242777006,0,0.50925170356284,0,0.162135226775035,0,1.43768206527355,0,0,0.252578877947112,0.358794827043824,0,0,0,0.162964976442026,0,0.234690248288502,0.502518772325447,0.238043640886014,1.36593553500459,0.472905432318573,0,0,0.327726629431476,0,0.289298117163023,0,0,0,0.551873492609465,0.160550589987792,0,0.163934945376675,0,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,0,0.141940085208269,0,0.651547837414304,0.164970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,0,0,0,0.363533729477506,0,0,0,0,0.340439605753788,0.36012218806262,0,0,0.177340233642274,0,0.493647061806363,0,0.23467170806371,0,0.220528398054962,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0,0.370850604021019,1.02522528478712,0.619160603889667,0.185194527369712,0.565105371014073,0.410082683163076,0.457556346413045,0.509935289981566,0.279902904647316,0.276399947608848,0,0.158167996790568,0,0,0,0.436725127492355,0.134864346384821,0.0826534557253359,0,0,0,1.12738587736838,0.598066184175915,1.15820943319968,0.583353565032143,0.645799117388655,0.337912250981556,0.704143431874524,0.13020438484395,0.314578033277133,0.241584120826006,0.576060012515731,1.58005560314089,0.202725215290164,0.513554785824136,0.77952493786677,0.895133478337407,0.596044064343795,1.32214994471966,0.886137163047463,1.51449674922221,1.295515713135,0.907435666231565,1.55932609183604,1.53938946624527,2.68816875017609,0.226730383615211,0.221985953374065,0.269141569828427,0.503653849092235,0.19318959403219,0.187682475451182,0.183151624267265,0.214368379079066,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0.453142408984205,0,0.103787347584177,0,0,0.243106717068294,0.209613162627982,0,0,0,0,0,0,0,0,0.256100609619477,0.17230640686684,0.476293691283074,0,0,0,0.147198920134397,0.342869252385415,0,0,0,0.188218760830661,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0,0,0.309873682371932,0,0,0.233931608445408,0.429742108096597,0.191288332068843,0,0.231867835620421
|short_description=p9@Smc4
}}

Latest revision as of 16:23, 25 September 2015

Short description:p9@Smc4
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Smc4_5end
Coexpression cluster:MCL_coexpression_mm9:29
Association with transcript: -6bp_to_ENSMUST00000042901_5end
EntrezGene:Smc4
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Smc4

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.50
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.47
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.34
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.54
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.70
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.42
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.22
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H12.34
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H41.46
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A12.69
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.57
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.12
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.00
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.00
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.52
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.44
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I20.00
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A40.15
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.00
eyeball, neonate N02.CNhs11205.1551-44G80.19
eyeball, neonate N16.CNhs11188.777-19A20.00
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.60
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.57
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.24
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.13
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.33
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.41
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.50
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C61.37
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C20.16
medulla oblongata, neonate N30.CNhs11200.1396-42A30.00
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.60
testis, embryo E15.CNhs11034.443-27C51.16
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.65
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B51.58
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.51
thymus, embryo E16.CNhs11002.456-26C50.78
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F81.32
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C41.51
thymus, neonate N07.CNhs11211.713-19D31.30
thymus, neonate N10.CNhs11194.748-24E40.91
thymus, neonate N20.CNhs11186.820-7A21.56
thymus, neonate N25.CNhs11125.1362-25G71.54
thymus, neonate N30.CNhs11132.1393-42G22.69
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.45
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.14
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.00
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
thymus4.79e-1123
neck4.79e-1123
respiratory system epithelium4.79e-1123
hemolymphoid system gland4.79e-1123
pharyngeal epithelium4.79e-1123
thymic region4.79e-1123
pharyngeal gland4.79e-1123
entire pharyngeal arch endoderm4.79e-1123
thymus primordium4.79e-1123
early pharyngeal endoderm4.79e-1123
hemopoietic organ1.11e-1029
immune organ1.11e-1029
pharynx1.53e-1024
gland of gut1.53e-1024
upper respiratory tract1.53e-1024
chordate pharynx1.53e-1024
pharyngeal arch system1.53e-1024
pharyngeal region of foregut1.53e-1024
segment of respiratory tract2.99e-0927
mixed endoderm/mesoderm-derived structure1.27e-0835
hematopoietic system5.81e-0845
blood island5.81e-0845
unilaminar epithelium2.16e-0766
hemolymphoid system2.29e-0748
immune system2.29e-0748
respiratory tract3.15e-0741
respiratory system5.04e-0742
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