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FFCP PHASE1:Mm9::chr8:70800612..70800651,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=72281
|EntrezGene=72281
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q9D7V1
|UniProt=Q9D7V1
|association_with_transcript=146bp_to_ENSMUST00000066594_5end
|association_with_transcript=146bp_to_ENSMUST00000066594_5end
|cluster_id=chr8:70800612..70800651,+
|description=CAGE_peak_1_at_Sh2d4a_5end
|description=CAGE_peak_1_at_Sh2d4a_5end
|id=chr8:70800612..70800651,+
|id=chr8:70800612..70800651,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004119!7.07e-19!130;UBERON:0000925!7.07e-19!130;UBERON:0006595!7.07e-19!130;UBERON:0001007!8.07e-19!128;UBERON:0001555!8.07e-19!128;UBERON:0007026!8.07e-19!128;UBERON:0000466!9.24e-19!79;UBERON:0005409!5.71e-18!59;UBERON:0004921!7.31e-18!126;UBERON:0004185!7.31e-18!126;UBERON:0000464!4.38e-15!57;UBERON:0005177!3.20e-12!85;UBERON:0000160!4.62e-12!43;UBERON:0000926!1.69e-11!193;UBERON:0004120!1.69e-11!193;UBERON:0006603!1.69e-11!193;UBERON:0002553!7.31e-11!39;UBERON:0002323!1.47e-10!37;UBERON:0004458!1.47e-10!37;UBERON:0003886!2.94e-10!38;UBERON:0009569!3.14e-10!66;UBERON:0000077!1.78e-09!97;UBERON:0002100!7.06e-09!98;UBERON:0003104!2.07e-08!131;UBERON:0009142!2.07e-08!131;UBERON:0001041!2.48e-08!92;UBERON:0001048!2.25e-07!147;UBERON:0004923!5.14e-07!24;UBERON:0002075!7.30e-07!19;UBERON:0002108!8.78e-07!16
|ontology_enrichment_uberon=UBERON:0004119!7.07e-19!130;UBERON:0000925!7.07e-19!130;UBERON:0006595!7.07e-19!130;UBERON:0001007!8.07e-19!128;UBERON:0001555!8.07e-19!128;UBERON:0007026!8.07e-19!128;UBERON:0000466!9.24e-19!79;UBERON:0005409!5.71e-18!59;UBERON:0004921!7.31e-18!126;UBERON:0004185!7.31e-18!126;UBERON:0000464!4.38e-15!57;UBERON:0005177!3.20e-12!85;UBERON:0000160!4.62e-12!43;UBERON:0000926!1.69e-11!193;UBERON:0004120!1.69e-11!193;UBERON:0006603!1.69e-11!193;UBERON:0002553!7.31e-11!39;UBERON:0002323!1.47e-10!37;UBERON:0004458!1.47e-10!37;UBERON:0003886!2.94e-10!38;UBERON:0009569!3.14e-10!66;UBERON:0000077!1.78e-09!97;UBERON:0002100!7.06e-09!98;UBERON:0003104!2.07e-08!131;UBERON:0009142!2.07e-08!131;UBERON:0001041!2.48e-08!92;UBERON:0001048!2.25e-07!147;UBERON:0004923!5.14e-07!24;UBERON:0002075!7.30e-07!19;UBERON:0002108!8.78e-07!16
|ontology_enrichment_uberon_v019_2=UBERON:0005177,6.40e-15,79;UBERON:0005409,6.09e-14,47;UBERON:0004119,9.47e-14,118;UBERON:0000925,9.47e-14,118;UBERON:0006595,9.47e-14,118;UBERON:0001007,1.06e-13,116;UBERON:0001555,1.06e-13,116;UBERON:0007026,1.06e-13,116;UBERON:0004921,7.38e-13,114;UBERON:0002100,2.77e-11,90;UBERON:0002553,3.24e-11,39;UBERON:0002323,6.69e-11,37;UBERON:0004458,6.69e-11,37;UBERON:0003886,1.37e-10,38;UBERON:0009569,2.56e-10,66;UBERON:0000160,1.93e-08,31;UBERON:0004923,3.17e-07,24;UBERON:0002075,4.57e-07,19;UBERON:0005172,7.13e-07,49;UBERON:0005173,7.13e-07,49;UBERON:0002417,7.13e-07,49;UBERON:0000916,7.13e-07,49
|phase1_expression=3.52327463630547,7.32848356042658,5.45999087267443,6.95667686005709,10.0179145989269,20.4812711732506,31.7713191209915,0,0,0,0,0,0,0,8.66085380720723,10.3262386368811,7.69518065940961,0.473193248037357,0.411343300817216,0.84877930359606,7.313722952992,0,0,22.7189240366637,22.4821095445827,9.18771142584032,14.2151458732495,17.453169847557,24.3229976904159,25.9591033652729,22.8382425974964,0,0,0,28.8851619751275,31.2521133273966,29.6045566580435,0.418531630736908,0,0,0,0.683045484958446,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.839918529752175,1.43752564364972,0,0,0,0,1.14613375975503,0.515672092277442,0.202316460859598,0,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,0,0.662605622854841,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0.589257170947335,0.284743361598206,0.745597783301202,0,0.0755715601067855,26.087803983151,5.16254326188832,2.03991400112325,2.69851595818909,9.74664626171504,12.9927797258227,9.97155382935438,0,0,0,3.09855523508697,0,0,0,15.154372870785,13.4280728701802,14.1546844604139,9.1347103775248,8.80388804400384,3.85949561568544,4.3371331691534,3.65358573974569,5.99600292865752,8.74191315205211,12.8171690777918,7.1629957057915,23.4835219347655,9.39895819979426,16.8076004870476,2.91180329905337,8.83366073841574,5.33362778448744,41.0061874679869,0,0.41889341362691,31.6766748458653,0.11981512450592,0,0,0,0,0,0,0,0,0.162241263067758,4.17541391786297,6.22034853050465,3.28539585963777,34.7229062212682,0.130120442962704,0.229902104433473,1.26043490863744,3.46621081022145,1.42876648217788,1.0249097622788,0.749613796477831,19.9201595469042,0,0.189106080167819,0,1.31517439456545,5.00485048606076,10.0993128291428,14.610531684964,9.15557627365069,0,0,0,2.48550927042602,3.98694301967864,3.24111710629827,2.60419209143731,7.87056926989615,11.415766353666,14.4171045745253,13.6819434713806,17.5148013550754,9.2153515951549,22.326775114757,14.024904051433,15.2047986922346,16.6858087621198,7.64976586934119,0,0,6.60837565967596,31.7340679996253,2.98603550749328,3.25131340604614,10.3093969057675,14.117846723634,11.7860363237781,8.3699275489526,21.353807769503,6.75265714368445,7.28872105520782,8.75408476981064,10.9179888786707,21.5716658077013,32.4207074812041,30.4686148079182,2.46568271239006,4.34144347916969,5.63538678365402,7.127796474586,10.2794818198842,11.8529535614638,21.5636591593717,34.2455543312677,34.8537175807852,25.4198157678909,12.4510103376603,8.5091003915208,12.579775687245,15.2906236421701,15.8230894683032,13.5059209461353,11.7127891819453,13.5217184601881,6.16113861745134,9.06052663520669,10.0637744569148,7.44281895337007,14.9778083094989,24.5001511608698,20.9894973820637,18.8152973331713,22.3551360101592,0.947457058852424,2.11854469374634,4.92260748748046,14.0814148973101,24.2884073290633,32.8500224422699,30.2457154179588,15.1329738341943,14.6166695168191,14.5103839478313,20.1551877100358,17.6138681503213,16.6346417368738,1.50791283939272,0,13.769399644533,4.96686143348518,0.963303539926752,0.35163505977661,0,2.7771801992481,0.631016438832513,0,0,0.716906393857656,0.668396022247182,0.283076530788832,1.61924280669958,0.876767573733936,1.18586333383957,0,14.6198287764517,5.1639025063504,6.18970445543589,8.74341651754438,69.0274719367807,2.91336763385978,8.16273603804828,15.0884063804718,12.4026795009925,21.5204603560749,15.247269296925,20.3578888507403,20.3203505679291,37.6083741943621,44.2758156014995,39.191506434311,3.40439605753788,0,0,0,0,0,0,0.304464949114599,3.52007562095566,9.74427525973573,19.1859706307817,23.5787341706316,16.1464426695906,17.6113740790215,23.8744688006273,34.1413071469727,20.4036585640896,0.370850604021019,11.7900907750518,5.77883230297023,14.4451731348375,20.5321618135113,22.6912418016902,20.590035588587,0,0.139951452323658,0.276399947608848,107.877779835708,0.474503990371703,11.9958485604841,21.6010681643603,36.3813635065176,35.3747353268808,32.367443132357,35.7062928733451,71.7211281036241,25.7933796850668,41.0083946637371,9.58277995763124,18.6895682554973,17.5385999884523,16.3338998209,21.6988503442588,28.8914974589231,31.3343827184163,29.4261909747327,40.8951443260272,18.1188090619505,10.3690802252832,4.10814456816632,1.01362607645082,1.02710957164827,1.16928740680016,0.716106782669926,0.198681354781265,0.841368146639782,0.738447635872886,1.00966449948148,0.381034033274999,0.604957110821043,0.877120926657772,0.481059208201647,0.233753804363138,34.4630183095121,0,0,0,30.5239558570861,11.2609485270709,23.0771046576754,32.1552568618599,12.0377304968487,0.564751842617067,0.920650473014354,0,0.171853182343688,0,0,0,0,0,0,0.830298780673413,0.399024873401031,1.02440163452481,5.83456120963906,3.77303692730368,3.12533964365024,6.22290837844523,7.41726206060019,5.13470735346904,5.30664144703975,3.8021894983536,5.28153755881013,6.08669798554236,5.76226371643823,5.05432126809397,4.76293691283074,6.02598494913249,7.33055037762079,5.76920261124629,5.2991611248383,4.11443102862498,3.54951612318675,6.67621331852499,4.79643174886684,5.74067220533517,5.58456412085065,4.57319932181931,8.41823076601097,4.48153575691344,3.36685362994643,4.50813068871862,6.99381824866501,3.6830793885272,5.88759996506671,7.33045121728337,3.49734809113124,7.48581147025307,9.02458427002853,4.01705497344571,5.95596831622692,4.63735671240843
|phase1_expression=3.52327463630547,7.32848356042658,5.45999087267443,6.95667686005709,10.0179145989269,20.4812711732506,31.7713191209915,0,0,0,0,0,0,0,8.66085380720723,10.3262386368811,7.69518065940961,0.473193248037357,0.411343300817216,0.84877930359606,7.313722952992,0,0,22.7189240366637,22.4821095445827,9.18771142584032,14.2151458732495,17.453169847557,24.3229976904159,25.9591033652729,22.8382425974964,0,0,0,28.8851619751275,31.2521133273966,29.6045566580435,0.418531630736908,0,0,0,0.683045484958446,0,0,0,0,0,0.218025156380447,0.219686182734472,0,0.839918529752175,1.43752564364972,0,0,0,0,1.14613375975503,0.515672092277442,0.202316460859598,0,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0,0,0,0.662605622854841,0,0,0,0,0.255374676170375,0,0,0,0,0,0,0,0.589257170947335,0.284743361598206,0.745597783301202,0,0.0755715601067855,26.087803983151,5.16254326188832,2.03991400112325,2.69851595818909,9.74664626171504,12.9927797258227,9.97155382935438,0,0,0,3.09855523508697,0,0,0,15.154372870785,13.4280728701802,14.1546844604139,9.1347103775248,8.80388804400384,3.85949561568544,4.3371331691534,3.65358573974569,5.99600292865752,8.74191315205211,12.8171690777918,7.1629957057915,23.4835219347655,9.39895819979426,16.8076004870476,2.91180329905337,8.83366073841574,5.33362778448744,41.0061874679869,0,0.41889341362691,31.6766748458653,0.11981512450592,0,0,0,0,0,0,0,0,0.162241263067758,4.17541391786297,6.22034853050465,3.28539585963777,34.7229062212682,0.130120442962704,0.229902104433473,1.26043490863744,3.46621081022145,1.42876648217788,1.0249097622788,0.749613796477831,19.9201595469042,0,0.189106080167819,0,1.31517439456545,5.00485048606076,10.0993128291428,14.610531684964,9.15557627365069,0,0,0,2.48550927042602,3.98694301967864,3.24111710629827,2.60419209143731,7.87056926989615,11.415766353666,14.4171045745253,13.6819434713806,17.5148013550754,9.2153515951549,22.326775114757,14.024904051433,15.2047986922346,16.6858087621198,7.64976586934119,0,0,6.60837565967596,31.7340679996253,2.98603550749328,3.25131340604614,10.3093969057675,14.117846723634,11.7860363237781,8.3699275489526,21.353807769503,6.75265714368445,7.28872105520782,8.75408476981064,10.9179888786707,21.5716658077013,32.4207074812041,30.4686148079182,2.46568271239006,4.34144347916969,5.63538678365402,7.127796474586,10.2794818198842,11.8529535614638,21.5636591593717,34.2455543312677,34.8537175807852,25.4198157678909,12.4510103376603,8.5091003915208,12.579775687245,15.2906236421701,15.8230894683032,13.5059209461353,11.7127891819453,13.5217184601881,6.16113861745134,9.06052663520669,10.0637744569148,7.44281895337007,14.9778083094989,24.5001511608698,20.9894973820637,18.8152973331713,22.3551360101592,0.947457058852424,2.11854469374634,4.92260748748046,14.0814148973101,24.2884073290633,32.8500224422699,30.2457154179588,15.1329738341943,14.6166695168191,14.5103839478313,20.1551877100358,17.6138681503213,16.6346417368738,1.50791283939272,0,13.769399644533,4.96686143348518,0.963303539926752,0.35163505977661,0,2.7771801992481,0.631016438832513,0,0,0.716906393857656,0.668396022247182,0.283076530788832,1.61924280669958,0.876767573733936,1.18586333383957,0,14.6198287764517,5.1639025063504,6.18970445543589,8.74341651754438,69.0274719367807,2.91336763385978,8.16273603804828,15.0884063804718,12.4026795009925,21.5204603560749,15.247269296925,20.3578888507403,20.3203505679291,37.6083741943621,44.2758156014995,39.191506434311,3.40439605753788,0,0,0,0,0,0,0.304464949114599,3.52007562095566,9.74427525973573,19.1859706307817,23.5787341706316,16.1464426695906,17.6113740790215,23.8744688006273,34.1413071469727,20.4036585640896,0.370850604021019,11.7900907750518,5.77883230297023,14.4451731348375,20.5321618135113,22.6912418016902,20.590035588587,0,0.139951452323658,0.276399947608848,107.877779835708,0.474503990371703,11.9958485604841,21.6010681643603,36.3813635065176,35.3747353268808,32.367443132357,35.7062928733451,71.7211281036241,25.7933796850668,41.0083946637371,9.58277995763124,18.6895682554973,17.5385999884523,16.3338998209,21.6988503442588,28.8914974589231,31.3343827184163,29.4261909747327,40.8951443260272,18.1188090619505,10.3690802252832,4.10814456816632,1.01362607645082,1.02710957164827,1.16928740680016,0.716106782669926,0.198681354781265,0.841368146639782,0.738447635872886,1.00966449948148,0.381034033274999,0.604957110821043,0.877120926657772,0.481059208201647,0.233753804363138,34.4630183095121,0,0,0,30.5239558570861,11.2609485270709,23.0771046576754,32.1552568618599,12.0377304968487,0.564751842617067,0.920650473014354,0,0.171853182343688,0,0,0,0,0,0,0.830298780673413,0.399024873401031,1.02440163452481,5.83456120963906,3.77303692730368,3.12533964365024,6.22290837844523,7.41726206060019,5.13470735346904,5.30664144703975,3.8021894983536,5.28153755881013,6.08669798554236,5.76226371643823,5.05432126809397,4.76293691283074,6.02598494913249,7.33055037762079,5.76920261124629,5.2991611248383,4.11443102862498,3.54951612318675,6.67621331852499,4.79643174886684,5.7406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|short_description=p1@Sh2d4a
|short_description=p1@Sh2d4a
}}
}}

Latest revision as of 16:39, 25 September 2015

Short description:p1@Sh2d4a
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Sh2d4a_5end
Coexpression cluster:NA
Association with transcript: 146bp_to_ENSMUST00000066594_5end
EntrezGene:Sh2d4a
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Sh2d4a

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I57.33
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I65.46
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.96
CD326+ enterocyte, pool2.CNhs13197.11849-124I410.02
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I720.48
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I831.77
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A18.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A310.33
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A57.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.41
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.85
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A37.31
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D122.72
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D222.48
GP2+ M cell, pool1.CNhs13228.11845-124H99.19
GP2+ M cell, pool2.CNhs13231.11846-124I114.22
GP2+ M cell, pool3.CNhs13240.11847-124I217.45
Ileum epithelium, pool1.CNhs13199.10252-104B924.32
Ileum epithelium, pool2.CNhs13232.10253-104C125.96
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C822.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F528.89
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F631.25
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F729.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.84
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E11.15
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.66
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.00
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.00
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.00
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G326.09
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F75.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F49.75
Mouse hepatocyte, donor8.CNhs13091.11824-124F612.99
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A79.97
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.10
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G115.15
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G213.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G314.15
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B69.13
accessory axillary lymph node, adult.CNhs10475.1063-29H98.80
adrenal gland, adult.CNhs10508.49-24D73.86
adrenal gland, embryo E14.CNhs11038.406-44C54.34
adrenal gland, embryo E16.CNhs11004.1254-43D63.65
adrenal gland, embryo E17.CNhs11043.1263-45I16.00
adrenal gland, embryo E18.CNhs11026.1262-18F58.74
adrenal gland, neonate N00.CNhs11191.1311-23C112.82
adrenal gland, neonate N25.CNhs11223.1377-27I37.16
amnion, adult pregnant day17.5.CNhs10488.583-22A823.48
aorta, adult.CNhs10498.46-23H19.40
bone (os femoris), adult.CNhs10483.56-12G216.81
bone (os femoris), neonate N02.CNhs11227.1985-43F52.91
bone (os femoris), neonate N16.CNhs11225.1525-43A68.83
bone (os femoris), neonate N20.CNhs11195.1350-25C35.33
cecum, adult.CNhs10467.37-13H441.01
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H731.68
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.00
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.00
cortex, neonate N30.CNhs11107.1392-42F20.00
diencephalon, adult.CNhs10482.20-12F20.00
diencephalon, neonate N30.CNhs11201.1388-42B20.16
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.18
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A26.22
epididymis, adult.CNhs10490.58-23B23.29
eyeball, adult.CNhs10484.31-12G434.72
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D43.47
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E71.02
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A219.92
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E75.00
forelimb, embryo E17.CNhs10598.1517-43C410.10
forelimb, embryo E18.CNhs11008.1520-43B514.61
gonad, embryo E13.CNhs11044.1564-45I69.16
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E92.49
heart, embryo E12.CNhs11015.353-12F53.99
heart, embryo E13.CNhs11013.376-3I93.24
heart, embryo E14.CNhs10597.403-26D42.60
heart, embryo E15.CNhs11017.431-16C87.87
heart, embryo E16.CNhs11021.457-17C611.42
heart, embryo E17.CNhs11025.479-18E514.42
heart, embryo E18.CNhs11030.1283-20G313.68
heart, neonate N00.CNhs11213.639-21E317.51
heart, neonate N03.CNhs11221.1349-25I29.22
heart, neonate N10.CNhs11118.749-24G122.33
heart, neonate N16.CNhs11209.782-15G114.02
heart, neonate N20.CNhs11127.821-26I615.20
heart, neonate N25.CNhs11196.1351-25D316.69
heart, neonate N30.CNhs11202.1390-42D27.65
hippocampus, adult.CNhs10478.13-16E80.00
hippocampus, neonate N00.CNhs11228.627-43G10.00
intestinal mucosa, adult.CNhs10506.860-29I36.61
intestine, adult.CNhs10496.178-9A331.73
intestine, embryo E12.CNhs11019.1251-16I52.99
intestine, embryo E13.CNhs11010.381-16D53.25
intestine, embryo E15.CNhs10602.976-16D810.31
intestine, embryo E16.CNhs10585.463-22H414.12
intestine, embryo E17.CNhs10582.482-18D311.79
intestine, embryo E18.CNhs10526.1289-20F78.37
intestine, neonate N00.CNhs11126.644-26D121.35
intestine, neonate N01.CNhs11192.1322-23E96.75
intestine, neonate N06.CNhs11102.688-20B87.29
intestine, neonate N07.CNhs11095.720-20F28.75
intestine, neonate N10.CNhs11098.755-23A510.92
intestine, neonate N20.CNhs11187.827-18D121.57
intestine, neonate N25.CNhs11121.1352-25E332.42
intestine, neonate N30.CNhs11131.1384-42G130.47
kidney, embryo E14.CNhs10606.411-4I92.47
kidney, embryo E15.CNhs10997.434-16F84.34
kidney, embryo E16.CNhs10584.464-22A55.64
kidney, embryo E17.CNhs11028.483-18I27.13
kidney, embryo E18.CNhs11001.1288-20C710.28
kidney, neonate N00.CNhs11214.646-21G711.85
kidney, neonate N10.CNhs11206.758-6D521.56
kidney, neonate N20.CNhs11113.832-19I134.25
kidney, neonate N25.CNhs11122.1353-25F334.85
kidney, neonate N30.CNhs11203.1385-42H125.42
liver, adult pregnant day01.CNhs10466.508-5B212.45
liver, embryo E12.CNhs10601.355-15F88.51
liver, embryo E13.CNhs10524.378-3H612.58
liver, embryo E14.CNhs10594.409-16E115.29
liver, embryo E15.CNhs10520.433-16D715.82
liver, embryo E16.CNhs10523.462-17F513.51
liver, embryo E17.CNhs10510.481-18A311.71
liver, embryo E18.CNhs10579.499-43G413.52
liver, neonate N00.CNhs11117.641-24F46.16
liver, neonate N03.CNhs11123.1345-25G29.06
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H27.44
liver, neonate N10.CNhs11115.751-24B914.98
liver, neonate N20.CNhs11220.823-25A324.50
liver, neonate N25.CNhs11198.1368-26H120.99
liver, neonate N30.CNhs11106.1382-42D118.82
lung, adult.CNhs10474.28-22B122.36
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F82.12
lung, embryo E15.CNhs11020.432-17C54.92
lung, embryo E16.CNhs10998.458-17B614.08
lung, embryo E17.CNhs10605.480-44A624.29
lung, embryo E18.CNhs10583.1287-20I632.85
lung, neonate N00.CNhs11224.640-42C630.25
lung, neonate N06.CNhs11212.683-20E515.13
lung, neonate N07.CNhs11111.715-19A314.62
lung, neonate N10.CNhs11219.750-23E614.51
lung, neonate N20.CNhs11109.822-18A420.16
lung, neonate N25.CNhs11119.1359-25C717.61
lung, neonate N30.CNhs11133.1394-42H216.63
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B613.77
mammary gland, adult pregnant day19.CNhs10476.588-5H24.97
medulla oblongata, adult.CNhs10477.17-12C20.96
medulla oblongata, neonate N30.CNhs11200.1396-42A30.35
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C22.78
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.63
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I714.62
ovary, embryo E18.CNhs11040.505-44H75.16
ovary, neonate N00.CNhs11217.1299-22I46.19
oviduct, adult pregnant day01.CNhs10500.988-6G68.74
pancreas, adult.CNhs10486.34-16E469.03
pancreas, embryo E14.CNhs11012.405-44F42.91
pancreas, embryo E15.CNhs11042.1556-45F28.16
pancreas, embryo E16.CNhs11003.460-26E515.09
pancreas, embryo E17.CNhs10599.1558-45G312.40
pancreas, embryo E18.CNhs10580.1535-43I721.52
pancreas, neonate N00.CNhs11105.645-26G915.25
pancreas, neonate N01.CNhs11138.1531-43D720.36
pancreas, neonate N02.CNhs11139.1539-43D820.32
pancreas, neonate N16.CNhs11136.787-43B637.61
pancreas, neonate N25.CNhs11094.1555-45E244.28
pancreas, neonate N30.CNhs11182.1548-44H539.19
pituitary gland, adult.CNhs10493.21-1G83.40
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.00
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I73.52
placenta, adult pregnant day17.CNhs10464.577-18G39.74
prostate, adult.CNhs10470.859-1F819.19
skin, adult.CNhs10492.30-1C323.58
skin, neonate N00.CNhs11124.650-25G416.15
skin, neonate N03.CNhs11215.662-22H317.61
skin, neonate N06.CNhs11097.693-20I523.87
skin, neonate N10.CNhs11108.762-6C434.14
small intestine, neonate N16.CNhs11114.790-21I120.40
spinal cord, adult.CNhs10505.24-13C90.37
spleen, adult.CNhs10465.25-2G211.79
spleen, embryo E16.CNhs11035.461-43C15.78
spleen, embryo E18.CNhs11011.1271-21F214.45
spleen, neonate N10.CNhs11116.752-24D120.53
spleen, neonate N20.CNhs11112.824-19H122.69
spleen, neonate N25.CNhs11099.1354-25G320.59
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.28
stomach, adult.CNhs10503.33-1H6107.88
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G812.00
stomach, embryo E16.CNhs11022.459-17D421.60
stomach, embryo E17.CNhs11006.1035-18D536.38
stomach, embryo E18.CNhs10999.1286-20C635.37
stomach, neonate N03.CNhs11193.1340-24B832.37
stomach, neonate N07.CNhs11210.718-18A935.71
stomach, neonate N25.CNhs11104.1355-25E471.72
stomach, neonate N30.CNhs11134.1386-42I125.79
submandibular gland, adult.CNhs10469.59-29C141.01
testis, adult.CNhs10504.57-7G59.58
testis, embryo E13.CNhs11031.389-23F518.69
testis, embryo E15.CNhs11034.443-27C517.54
testis, embryo E16.CNhs11033.470-26G516.33
testis, embryo E17.CNhs11029.486-18I521.70
testis, embryo E18.CNhs11027.503-18G528.89
testis, neonate N00.CNhs11189.1300-22B731.33
testis, neonate N07.CNhs11222.726-26I429.43
testis, neonate N10.CNhs11204.763-44D940.90
testis, neonate N20.CNhs11110.839-18H318.12
testis, neonate N30.CNhs11130.1391-42E210.37
thymus, adult.CNhs10471.38-12B54.11
thymus, embryo E14.CNhs11041.402-44I41.01
thymus, embryo E15.CNhs11005.430-45I21.03
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C10.72
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.84
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C41.01
thymus, neonate N07.CNhs11211.713-19D30.38
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.88
thymus, neonate N25.CNhs11125.1362-25G70.48
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B434.46
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E430.52
uterus, adult pregnant day19.CNhs10497.590-15F511.26
uterus, adult.CNhs10509.92-27E523.08
vagina, adult.CNhs10502.89-27D532.16
vesicular gland, adult.CNhs10491.51-27F812.04
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.56
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.17
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D25.83
whole body, embryo E14.CNhs10519.395-14B13.77
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G56.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G57.42
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.13
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.31
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.80
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G55.28
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G56.09
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G55.76
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G56.03
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G57.33
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G55.30
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G54.11
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G56.68
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G55.74
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.58
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.57
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G56.99
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G55.89
whole body, embryo E17.5.CNhs10513.490-9F97.33
whole body, embryo E17.CNhs10517.475-3I53.50
whole body, embryo E18.CNhs10516.493-3B37.49
whole body, neonate N00.CNhs10525.657-19C29.02
whole body, neonate N01.CNhs10576.659-23C64.02
whole body, neonate N06.CNhs10515.692-21D15.96
whole body, neonate N10.CNhs10518.761-6B44.64





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
trunk region element6.40e-1579
gastrointestinal system6.09e-1447
endoderm-derived structure9.47e-14118
endoderm9.47e-14118
presumptive endoderm9.47e-14118
digestive system1.06e-13116
digestive tract1.06e-13116
primitive gut1.06e-13116
subdivision of digestive tract7.38e-13114
trunk2.77e-1190
anatomical cavity3.24e-1139
body cavity6.69e-1137
body cavity or lining6.69e-1137
body cavity precursor1.37e-1038
subdivision of trunk2.56e-1066
intestine1.93e-0831
organ component layer3.17e-0724
viscus4.57e-0719
abdomen element7.13e-0749
abdominal segment element7.13e-0749
abdominal segment of trunk7.13e-0749
abdomen7.13e-0749
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