FFCP PHASE1:Mm9::chr11:75968459..75968491,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=68299 | |EntrezGene=68299 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=46 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000143459_5end | |association_with_transcript=0bp_to_ENSMUST00000143459_5end | ||
|cluster_id=chr11:75968459..75968491,- | |||
|description=CAGE_peak_2_at_Vps53_5end | |description=CAGE_peak_2_at_Vps53_5end | ||
|id=chr11:75968459..75968491,- | |id=chr11:75968459..75968491,- | ||
|ontology_enrichment_celltype=CL:0000068!4.87e-07!3;CL:0002202!4.87e-07!3;CL:0000069!4.87e-07!3;CL:0002632!4.87e-07!3;CL:0002368!4.87e-07!3;CL:0000307!4.87e-07!3;CL:0000377!4.87e-07!3 | |ontology_enrichment_celltype=CL:0000068!4.87e-07!3;CL:0002202!4.87e-07!3;CL:0000069!4.87e-07!3;CL:0002632!4.87e-07!3;CL:0002368!4.87e-07!3;CL:0000307!4.87e-07!3;CL:0000377!4.87e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000068,3.27e-44,3;CL:0002202,3.27e-44,3;CL:0000069,3.27e-44,3;CL:0002632,3.27e-44,3;CL:0002368,3.27e-44,3;CL:0000307,3.27e-44,3;CL:0000377,3.27e-44,3;CL:0002076,1.62e-09,15;CL:0002605,1.81e-08,2;CL:0002604,1.81e-08,2;CL:0000223,2.62e-07,20 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000014!3.42e-07!5;UBERON:0001003!3.42e-07!5;UBERON:0002097!3.42e-07!5;UBERON:0002199!3.42e-07!5;UBERON:0007029!3.42e-07!5;UBERON:0007376!3.42e-07!5;UBERON:0002416!3.42e-07!5;UBERON:0007383!3.42e-07!5;UBERON:0003126!4.87e-07!3;UBERON:0001005!4.87e-07!3;UBERON:0007196!4.87e-07!3;UBERON:0001558!4.87e-07!3;UBERON:0005631!7.17e-07!3;UBERON:0000478!7.17e-07!3;UBERON:0000158!7.17e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,3.27e-44,3;UBERON:0001005,3.27e-44,3;UBERON:0007196,3.27e-44,3;UBERON:0001558,3.27e-44,3;UBERON:0005631,2.49e-20,3;UBERON:0000478,2.49e-20,3;UBERON:0000158,2.49e-20,3;UBERON:0000305,3.44e-16,1;UBERON:0005178,1.76e-08,17;UBERON:0005181,1.76e-08,17;UBERON:0002224,1.76e-08,17;UBERON:0000915,1.76e-08,17;UBERON:0008947,1.76e-08,17;UBERON:0003258,1.76e-08,17;UBERON:0001987,2.13e-08,2;UBERON:0003124,2.13e-08,2;UBERON:0004340,2.13e-08,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,1.09843091367236,0.777719596297134,0.139986421625363,0,0,0,0,0.771778308107841,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0.340860645156116,0,0.35333957451034,0,0,0,0,5.62876706629157,3.54703811665138,3.0331466700887,0,0,0,0,0,0,0,0,0,11.3709685157812,0,0.884610551949874,0.485300549842228,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0.163934945376675,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,1.0591603543191,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0,0.114870937911227,0.952587382566147,0,0,0,0.147198920134397,0.685738504770831,0,0,0,0,0.169229215783353,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,1.09843091367236,0.777719596297134,0.139986421625363,0,0,0,0,0.771778308107841,0.286533439938757,0.515672092277442,0,0,0,0.338844532069132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0.340860645156116,0,0.35333957451034,0,0,0,0,5.62876706629157,3.54703811665138,3.0331466700887,0,0,0,0,0,0,0,0,0,11.3709685157812,0,0.884610551949874,0.485300549842228,0.220841518460394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0.19496408711912,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0,0,0,0,0,0,0,0,0.163934945376675,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704015124191131,1.0591603543191,0,0.16488625294148,0.161464426695906,0.0603129249281559,0.119372344003136,0.164140899745061,0.291480836629851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0.116876902181569,0,0,0,0,0,0.187682475451182,0,0.428736758158132,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0.252697211763798,0,0,0.0936415074698824,0,0.114870937911227,0.952587382566147,0,0,0,0.147198920134397,0.685738504770831,0,0,0,0,0.169229215783353,0,0,0.135804113845862,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0.463735671240843 | ||
|short_description=p2@Vps53 | |short_description=p2@Vps53 | ||
}} | }} |
Latest revision as of 16:48, 25 September 2015
Short description: | p2@Vps53 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Vps53_5end |
Coexpression cluster: | MCL_coexpression_mm9:46 |
Association with transcript: | 0bp_to_ENSMUST00000143459_5end |
EntrezGene: | Vps53 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 3.27e-44 | 3 |
epithelial cell of tracheobronchial tree | 3.27e-44 | 3 |
branched duct epithelial cell | 3.27e-44 | 3 |
epithelial cell of lower respiratory tract | 3.27e-44 | 3 |
respiratory epithelial cell | 3.27e-44 | 3 |
tracheal epithelial cell | 3.27e-44 | 3 |
tracheoblast | 3.27e-44 | 3 |
endo-epithelial cell | 1.62e-09 | 15 |
astrocyte of the cerebral cortex | 1.81e-08 | 2 |
astrocyte of the hippocampus | 1.81e-08 | 2 |
endodermal cell | 2.62e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
trachea | 3.27e-44 | 3 |
respiratory airway | 3.27e-44 | 3 |
tracheobronchial tree | 3.27e-44 | 3 |
lower respiratory tract | 3.27e-44 | 3 |
extraembryonic membrane | 2.49e-20 | 3 |
extraembryonic structure | 2.49e-20 | 3 |
membranous layer | 2.49e-20 | 3 |
amnion | 3.44e-16 | 1 |
thoracic cavity element | 1.76e-08 | 17 |
thoracic segment organ | 1.76e-08 | 17 |
thoracic cavity | 1.76e-08 | 17 |
thoracic segment of trunk | 1.76e-08 | 17 |
respiratory primordium | 1.76e-08 | 17 |
endoderm of foregut | 1.76e-08 | 17 |
placenta | 2.13e-08 | 2 |
chorion | 2.13e-08 | 2 |
allantois | 2.13e-08 | 2 |