Personal tools

FFCP PHASE1:Mm9::chr11:76250700..76250730,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=109934
|EntrezGene=109934
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000131059_5end
|association_with_transcript=0bp_to_ENSMUST00000131059_5end
|cluster_id=chr11:76250700..76250730,-
|description=CAGE_peak_8_at_Abr_5end
|description=CAGE_peak_8_at_Abr_5end
|id=chr11:76250700..76250730,-
|id=chr11:76250700..76250730,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000033!1.30e-11!63;UBERON:0000955!1.74e-10!50;UBERON:0006238!1.74e-10!50;UBERON:0002616!4.83e-10!49;UBERON:0001049!1.69e-09!52;UBERON:0005068!1.69e-09!52;UBERON:0006241!1.69e-09!52;UBERON:0007135!1.69e-09!52;UBERON:0003056!4.86e-09!49;UBERON:0001017!1.35e-08!73;UBERON:0005743!1.35e-08!73;UBERON:0002346!4.46e-08!71;UBERON:0003075!4.46e-08!71;UBERON:0007284!4.46e-08!71;UBERON:0000073!6.94e-08!75;UBERON:0001016!6.94e-08!75;UBERON:0004121!8.87e-08!102;UBERON:0000924!8.87e-08!102;UBERON:0006601!8.87e-08!102;UBERON:0000468!1.07e-07!333;UBERON:0003080!3.55e-07!40
|ontology_enrichment_uberon=UBERON:0000033!1.30e-11!63;UBERON:0000955!1.74e-10!50;UBERON:0006238!1.74e-10!50;UBERON:0002616!4.83e-10!49;UBERON:0001049!1.69e-09!52;UBERON:0005068!1.69e-09!52;UBERON:0006241!1.69e-09!52;UBERON:0007135!1.69e-09!52;UBERON:0003056!4.86e-09!49;UBERON:0001017!1.35e-08!73;UBERON:0005743!1.35e-08!73;UBERON:0002346!4.46e-08!71;UBERON:0003075!4.46e-08!71;UBERON:0007284!4.46e-08!71;UBERON:0000073!6.94e-08!75;UBERON:0001016!6.94e-08!75;UBERON:0004121!8.87e-08!102;UBERON:0000924!8.87e-08!102;UBERON:0006601!8.87e-08!102;UBERON:0000468!1.07e-07!333;UBERON:0003080!3.55e-07!40
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.36e-09,64;UBERON:0003075,3.36e-09,64;UBERON:0007284,3.36e-09,64;UBERON:0000073,4.05e-09,54;UBERON:0003056,8.37e-09,49;UBERON:0000955,1.36e-08,47;UBERON:0006238,1.36e-08,47;UBERON:0010371,1.42e-08,73;UBERON:0002616,4.09e-08,46;UBERON:0001049,4.26e-08,52;UBERON:0005068,4.26e-08,52;UBERON:0006241,4.26e-08,52;UBERON:0007135,4.26e-08,52;UBERON:0004121,6.53e-08,95;UBERON:0000924,6.53e-08,95;UBERON:0006601,6.53e-08,95;UBERON:0001017,3.22e-07,73;UBERON:0001894,9.39e-07,10;UBERON:0006222,9.39e-07,10
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.709638518536602,0,0,0.65407546914134,1.97717564461025,0.972149495371417,1.53985063787899,2.87505128729943,0,0,0,0,0.286533439938757,0,0.404632921719196,0.528990979272033,1.26766280701236,0.677689064138264,1.77858959222228,0,0,0,0.299600110518405,1.15265491596466,0.311068836925433,0.405017814995072,0.630974884054146,1.71390590642282,1.54607978666129,0,0,0,4.40463523997555,3.83062014255563,2.76491759861238,0.131886287730194,0.274462930807229,0,3.90856198601933,2.8138130501584,2.44477196442896,0.883885756421003,0.996601765593721,0.745597783301202,0,0.0755715601067855,2.31891590961342,0,0,0,0,0,0.842666520790511,0,0,0,0.422530259330042,0,2.54805239706646,0,0,0,0,0.79928715803342,0,0,0.346970653532272,0,0.230615497256059,0.452167921657868,0,0.251333182659351,1.48316980640624,1.44599356919912,0,2.26473589926373,1.98757366614354,0.484875253135222,0,3.80615036115011,4.39838084308256,1.02182822083437,0,0,0,7.9389038884556,3.66000482254901,0.251308704225729,2.08589184230732,2.30143911597297,6.02585329222724,5.51620294430376,0.509196819251581,1.49288364732112,1.0108910337347,1.68353484709179,1.04096354370163,3.44853156650209,1.0803727788321,1.05493372485001,2.04109497453984,1.2811372028485,1.21812241927647,2.32833033665114,0.862271971731369,0.378212160335639,0.879755620819744,2.41115305670332,0.556094498451196,1.39300866608867,1.64625709126355,0.995171334092466,0,0,0,0.621377317606506,0.234526059981096,1.08037236876609,0.946978942340841,0.787056926989615,1.07986979021165,0.232533944750408,1.07309360559848,0.817357396570186,1.15191894939436,1.97000956894914,2.67527071501324,1.60819986167866,2.85415149878366,0.805238512562231,2.3131894342054,0.92614151141356,0,1.58670339998127,1.91959425481711,2.55460339046482,2.31961430379768,3.22693639397348,2.66853652613844,2.66315876557583,2.37264530772256,1.4822905925161,2.5133520880027,1.1937388322469,2.33956904542944,1.79763881730844,1.72910439899755,0.597423819763102,0.379335801906163,1.02823661348756,3.38123207019241,0.610953983535943,2.52138233317913,1.54298803758701,2.27651533647326,1.32849133181642,1.09899109488962,0.616985819609003,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0.744281895337007,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0.568474235311454,0.977789858652155,1.35796068620151,2.11221223459652,2.1775813467436,1.6663054862021,3.31727201358258,2.83743259391144,2.43611158613652,2.23236676120482,1.14704320301017,1.38147985492716,1.3018415272336,0,0,0,0.551873492609465,6.58257418949947,6.68106613575558,0,1.76729649043061,0,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0,2.57057053137446,1.13552068166615,1.06839362200353,0.488660878060728,1.15479086080775,0,0.485561272309963,0.604647113929502,1.13163047853539,0.590603785761546,0.614870295887855,1.80899805217755,0,1.42598951353889,0.316036757935816,0,0,4.42571487479924,0.900305470156551,1.81102157295856,2.35770738534752,3.3694644392032,3.92411398724555,5.10101963866575,3.34911444026059,0,0,0.661585194164886,3.13283880588812,1.61464426695906,0.72375509913787,0.716234064018819,1.31312719796049,2.04036585640896,7.04616147639937,0.170870880797853,0.619160603889667,0.185194527369712,0,0,0.228778173206523,0,0,0,1.90934123603023,2.21435195506795,2.03319467126849,1.62008011232702,2.09088296014469,1.52853794622324,1.61837215661785,1.90102948168273,1.83229159388821,0.777689839750757,0,0,0,0.496375471371293,0.194451188344048,0.387479470433193,0,0.352071715937262,0.2604087696879,0.104859344425711,0,0,0,1.21635129174099,0.410843828659309,0.649604114888975,0.179026695667481,0.39736270956253,0.240390899039938,0.590758108698309,0.403865799792591,0,0.604957110821043,0.292373642219257,1.05833025804362,0.233753804363138,0.680191150845634,0,0,0,0.579568782096571,0.375364950902364,0.915758121336325,0.214368379079066,0,2.82375921308533,0.920650473014354,0.572895513439397,3.95262319390481,8.22099023724771,3.0215755895588,1.35004500046361,2.2516060161211,2.26571204492102,1.03552062350364,0.415149390336707,1.19707462020309,0.853668028770671,0.972426868273176,0.838452650511929,1.2869045591501,0.666740183404846,0.824140228955577,0.320919209591815,1.26348605881899,0.50695859978048,0.943131706930381,1.591905626988,1.47257850531199,1.43588672389033,2.85776214769844,1.27472758539341,0.964546102318525,1.23625770240992,0.735994600671987,2.74295401908332,0.887379030796687,1.43061713968393,0.726732083161643,1.2234219453993,1.01537529470012,1.09756783723664,1.57841826862706,1.35804113845862,0,1.42362021749009,1.67457620038458,0.818462086339379,1.39443157067369,0.964533054905707,1.24905288968973,1.63752125911786,1.71896843238639,2.86932498103265,1.10295709559758,3.2461496986859
|phase1_expression=1.12104192973356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.881277725829041,0.709638518536602,0,0,0.65407546914134,1.97717564461025,0.972149495371417,1.53985063787899,2.87505128729943,0,0,0,0,0.286533439938757,0,0.404632921719196,0.528990979272033,1.26766280701236,0.677689064138264,1.77858959222228,0,0,0,0.299600110518405,1.15265491596466,0.311068836925433,0.405017814995072,0.630974884054146,1.71390590642282,1.54607978666129,0,0,0,4.40463523997555,3.83062014255563,2.76491759861238,0.131886287730194,0.274462930807229,0,3.90856198601933,2.8138130501584,2.44477196442896,0.883885756421003,0.996601765593721,0.745597783301202,0,0.0755715601067855,2.31891590961342,0,0,0,0,0,0.842666520790511,0,0,0,0.422530259330042,0,2.54805239706646,0,0,0,0,0.79928715803342,0,0,0.346970653532272,0,0.230615497256059,0.452167921657868,0,0.251333182659351,1.48316980640624,1.44599356919912,0,2.26473589926373,1.98757366614354,0.484875253135222,0,3.80615036115011,4.39838084308256,1.02182822083437,0,0,0,7.9389038884556,3.66000482254901,0.251308704225729,2.08589184230732,2.30143911597297,6.02585329222724,5.51620294430376,0.509196819251581,1.49288364732112,1.0108910337347,1.68353484709179,1.04096354370163,3.44853156650209,1.0803727788321,1.05493372485001,2.04109497453984,1.2811372028485,1.21812241927647,2.32833033665114,0.862271971731369,0.378212160335639,0.879755620819744,2.41115305670332,0.556094498451196,1.39300866608867,1.64625709126355,0.995171334092466,0,0,0,0.621377317606506,0.234526059981096,1.08037236876609,0.946978942340841,0.787056926989615,1.07986979021165,0.232533944750408,1.07309360559848,0.817357396570186,1.15191894939436,1.97000956894914,2.67527071501324,1.60819986167866,2.85415149878366,0.805238512562231,2.3131894342054,0.92614151141356,0,1.58670339998127,1.91959425481711,2.55460339046482,2.31961430379768,3.22693639397348,2.66853652613844,2.66315876557583,2.37264530772256,1.4822905925161,2.5133520880027,1.1937388322469,2.33956904542944,1.79763881730844,1.72910439899755,0.597423819763102,0.379335801906163,1.02823661348756,3.38123207019241,0.610953983535943,2.52138233317913,1.54298803758701,2.27651533647326,1.32849133181642,1.09899109488962,0.616985819609003,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0.162135226775035,0,0,0.744281895337007,0.312037673114561,0,0.179397413521912,0,0.184753190166605,0.568474235311454,0.977789858652155,1.35796068620151,2.11221223459652,2.1775813467436,1.6663054862021,3.31727201358258,2.83743259391144,2.43611158613652,2.23236676120482,1.14704320301017,1.38147985492716,1.3018415272336,0,0,0,0.551873492609465,6.58257418949947,6.68106613575558,0,1.76729649043061,0,0.390438744296638,0.430846795465598,0,0.222798674082394,0,0.404810701674894,0.292255857911312,0,2.57057053137446,1.13552068166615,1.06839362200353,0.488660878060728,1.15479086080775,0,0.485561272309963,0.604647113929502,1.13163047853539,0.590603785761546,0.614870295887855,1.80899805217755,0,1.42598951353889,0.316036757935816,0,0,4.42571487479924,0.900305470156551,1.81102157295856,2.35770738534752,3.3694644392032,3.92411398724555,5.10101963866575,3.34911444026059,0,0,0.661585194164886,3.13283880588812,1.61464426695906,0.72375509913787,0.716234064018819,1.31312719796049,2.04036585640896,7.04616147639937,0.170870880797853,0.619160603889667,0.185194527369712,0,0,0.228778173206523,0,0,0,1.90934123603023,2.21435195506795,2.03319467126849,1.62008011232702,2.09088296014469,1.52853794622324,1.61837215661785,1.90102948168273,1.83229159388821,0.777689839750757,0,0,0,0.496375471371293,0.194451188344048,0.387479470433193,0,0.352071715937262,0.2604087696879,0.104859344425711,0,0,0,1.21635129174099,0.410843828659309,0.649604114888975,0.179026695667481,0.39736270956253,0.240390899039938,0.590758108698309,0.403865799792591,0,0.604957110821043,0.292373642219257,1.05833025804362,0.233753804363138,0.680191150845634,0,0,0,0.579568782096571,0.375364950902364,0.915758121336325,0.214368379079066,0,2.82375921308533,0.920650473014354,0.572895513439397,3.95262319390481,8.22099023724771,3.0215755895588,1.35004500046361,2.2516060161211,2.26571204492102,1.03552062350364,0.415149390336707,1.19707462020309,0.853668028770671,0.972426868273176,0.838452650511929,1.2869045591501,0.666740183404846,0.824140228955577,0.320919209591815,1.26348605881899,0.50695859978048,0.943131706930381,1.591905626988,1.47257850531199,1.43588672389033,2.85776214769844,1.27472758539341,0.964546102318525,1.23625770240992,0.735994600671987,2.74295401908332,0.887379030796687,1.43061713968393,0.726732083161643,1.2234219453993,1.01537529470012,1.09756783723664,1.57841826862706,1.35804113845862,0,1.42362021749009,1.67457620038458,0.818462086339379,1.39443157067369,0.964533054905707,1.24905288968973,1.63752125911786,1.71896843238639,2.86932498103265,1.10295709559758,3.2461496986859
|short_description=p8@Abr
|short_description=p8@Abr
}}
}}

Latest revision as of 16:55, 25 September 2015

Short description:p8@Abr
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_8_at_Abr_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000131059_5end
EntrezGene:Abr
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p8@Abr

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.02
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.88
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.71
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.97
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.40
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.68
Mouse Meningeal cells, donor3.CNhs12109.11639-122D11.78
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.30
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.41
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.55
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.13
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.27
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.91
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.44
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G32.32
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.00
adrenal gland, neonate N25.CNhs11223.1377-27I30.25
amnion, adult pregnant day17.5.CNhs10488.583-22A81.48
aorta, adult.CNhs10498.46-23H11.45
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F52.26
bone (os femoris), neonate N16.CNhs11225.1525-43A61.99
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I24.40
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.94
corpus striatum, adult.CNhs10487.19-21D83.66
corpus striatum, neonate N00.CNhs11226.630-43F10.25
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F22.30
diencephalon, adult.CNhs10482.20-12F26.03
diencephalon, neonate N30.CNhs11201.1388-42B25.52
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.49
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C61.04
eyeball, embryo E14.CNhs10521.399-16E23.45
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D41.05
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.22
eyeball, neonate N16.CNhs11188.777-19A22.33
forelimb, embryo E11.CNhs10596.335-25E20.86
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.88
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C41.39
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I91.08
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.79
heart, embryo E16.CNhs11021.457-17C61.08
heart, embryo E17.CNhs11025.479-18E50.23
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.82
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G11.97
heart, neonate N16.CNhs11209.782-15G12.68
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D32.85
heart, neonate N30.CNhs11202.1390-42D20.81
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G10.93
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A31.59
intestine, embryo E12.CNhs11019.1251-16I51.92
intestine, embryo E13.CNhs11010.381-16D52.55
intestine, embryo E15.CNhs10602.976-16D82.32
intestine, embryo E16.CNhs10585.463-22H43.23
intestine, embryo E17.CNhs10582.482-18D32.67
intestine, embryo E18.CNhs10526.1289-20F72.66
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E91.48
intestine, neonate N06.CNhs11102.688-20B82.51
intestine, neonate N07.CNhs11095.720-20F21.19
intestine, neonate N10.CNhs11098.755-23A52.34
intestine, neonate N20.CNhs11187.827-18D11.80
intestine, neonate N25.CNhs11121.1352-25E31.73
intestine, neonate N30.CNhs11131.1384-42G10.60
kidney, embryo E14.CNhs10606.411-4I90.38
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C72.52
kidney, neonate N00.CNhs11214.646-21G71.54
kidney, neonate N10.CNhs11206.758-6D52.28
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F31.10
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B62.11
lung, embryo E17.CNhs10605.480-44A62.18
lung, embryo E18.CNhs10583.1287-20I61.67
lung, neonate N00.CNhs11224.640-42C63.32
lung, neonate N06.CNhs11212.683-20E52.84
lung, neonate N07.CNhs11111.715-19A32.44
lung, neonate N10.CNhs11219.750-23E62.23
lung, neonate N20.CNhs11109.822-18A41.15
lung, neonate N25.CNhs11119.1359-25C71.38
lung, neonate N30.CNhs11133.1394-42H21.30
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C26.58
medulla oblongata, neonate N30.CNhs11200.1396-42A36.68
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I71.14
ovary, embryo E18.CNhs11040.505-44H71.07
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G61.15
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G91.81
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A52.36
pituitary gland, embryo E15.CNhs10592.427-16B93.37
pituitary gland, embryo E16.CNhs11036.449-43F63.92
pituitary gland, embryo E17.CNhs11039.1265-44F55.10
pituitary gland, neonate N00.CNhs11190.1308-22E93.35
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.66
skin, adult.CNhs10492.30-1C33.13
skin, neonate N00.CNhs11124.650-25G41.61
skin, neonate N03.CNhs11215.662-22H30.72
skin, neonate N06.CNhs11097.693-20I50.72
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I12.04
spinal cord, adult.CNhs10505.24-13C97.05
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E32.21
stomach, embryo E15.CNhs10603.1252-16G82.03
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D52.09
stomach, embryo E18.CNhs10999.1286-20C61.53
stomach, neonate N03.CNhs11193.1340-24B81.62
stomach, neonate N07.CNhs11210.718-18A91.90
stomach, neonate N25.CNhs11104.1355-25E41.83
stomach, neonate N30.CNhs11134.1386-42I10.78
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.65
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.60
thymus, neonate N20.CNhs11186.820-7A20.29
thymus, neonate N25.CNhs11125.1362-25G71.06
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.58
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D73.95
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.59
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.47
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.74
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.22
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.39
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C62.87
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm3.36e-0964
neural plate3.36e-0964
presumptive neural plate3.36e-0964
regional part of nervous system4.05e-0954
pre-chordal neural plate8.37e-0949
brain1.36e-0847
future brain1.36e-0847
ecto-epithelium1.42e-0873
regional part of brain4.09e-0846
neural tube4.26e-0852
neural rod4.26e-0852
future spinal cord4.26e-0852
neural keel4.26e-0852
ectoderm-derived structure6.53e-0895
ectoderm6.53e-0895
presumptive ectoderm6.53e-0895
central nervous system3.22e-0773
diencephalon9.39e-0710
future diencephalon9.39e-0710
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr11:76250700..76250730,-&oldid=4203108"