FFCP PHASE1:Mm9::chr10:126602881..126602956,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14421 | |EntrezGene=14421 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1223 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_NM_001244618,NM_027739,uc007hie.2,uc007hif.2,uc007hig.2_5end | |association_with_transcript=0bp_to_NM_001244618,NM_027739,uc007hie.2,uc007hif.2,uc007hig.2_5end | ||
|cluster_id=chr10:126602881..126602956,+ | |||
|description=CAGE_peak_2_at_B4galnt1_5end | |description=CAGE_peak_2_at_B4galnt1_5end | ||
|id=chr10:126602881..126602956,+ | |id=chr10:126602881..126602956,+ | ||
|ontology_enrichment_celltype=CL:0000063!1.97e-09!66;CL:0000988!4.41e-09!32;CL:0002032!4.41e-09!32;CL:0000037!4.41e-09!32;CL:0000566!4.41e-09!32;CL:0000837!4.41e-09!32;CL:0002031!2.00e-07!25;CL:0000084!5.80e-07!11;CL:0000827!5.80e-07!11;CL:0002320!8.18e-07!46;CL:0000134!8.18e-07!46;CL:0000838!9.40e-07!12 | |ontology_enrichment_celltype=CL:0000063!1.97e-09!66;CL:0000988!4.41e-09!32;CL:0002032!4.41e-09!32;CL:0000037!4.41e-09!32;CL:0000566!4.41e-09!32;CL:0000837!4.41e-09!32;CL:0002031!2.00e-07!25;CL:0000084!5.80e-07!11;CL:0000827!5.80e-07!11;CL:0002320!8.18e-07!46;CL:0000134!8.18e-07!46;CL:0000838!9.40e-07!12 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,9.90e-10,32;CL:0002032,9.90e-10,32;CL:0000037,9.90e-10,32;CL:0000837,9.90e-10,32;CL:0002320,6.08e-08,46;CL:0000134,6.08e-08,46;CL:0002031,6.24e-08,25;CL:0000084,3.18e-07,11;CL:0000827,3.18e-07,11;CL:0000838,5.28e-07,12;CL:0002563,6.51e-07,9;CL:0002251,6.51e-07,9;CL:0000738,8.22e-07,17;CL:0002087,8.22e-07,17 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!8.29e-23!130;UBERON:0000925!8.29e-23!130;UBERON:0006595!8.29e-23!130;UBERON:0001007!2.28e-22!128;UBERON:0001555!2.28e-22!128;UBERON:0007026!2.28e-22!128;UBERON:0004921!4.07e-21!126;UBERON:0004185!4.07e-21!126;UBERON:0005409!5.86e-15!59;UBERON:0000160!3.12e-12!43;UBERON:0002405!7.90e-12!70;UBERON:0004923!1.29e-11!24;UBERON:0002193!4.70e-11!48;UBERON:0000344!2.27e-10!15;UBERON:0002390!1.51e-09!45;UBERON:0003061!1.51e-09!45;UBERON:0001242!3.41e-09!13;UBERON:0000060!3.41e-09!13;UBERON:0001262!3.41e-09!13;UBERON:0004786!3.41e-09!13;UBERON:0003929!3.81e-09!55;UBERON:0000077!9.10e-09!97;UBERON:0005911!2.00e-08!69;UBERON:0001041!5.39e-08!92;UBERON:0000490!5.39e-07!66;UBERON:0002384!8.18e-07!46 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,7.68e-25,118;UBERON:0000925,7.68e-25,118;UBERON:0006595,7.68e-25,118;UBERON:0001007,2.11e-24,116;UBERON:0001555,2.11e-24,116;UBERON:0007026,2.11e-24,116;UBERON:0004921,4.61e-23,114;UBERON:0005409,3.86e-17,47;UBERON:0000160,1.21e-14,31;UBERON:0002193,3.81e-12,48;UBERON:0002405,3.81e-12,48;UBERON:0004923,4.24e-12,24;UBERON:0000344,8.59e-11,15;UBERON:0002390,1.56e-10,45;UBERON:0003061,1.56e-10,45;UBERON:0003929,4.77e-10,55;UBERON:0001242,1.47e-09,13;UBERON:0001262,1.47e-09,13;UBERON:0004786,1.47e-09,13;UBERON:0005911,1.87e-09,69;UBERON:0001041,7.24e-09,80;UBERON:0002384,6.08e-08,46;UBERON:0000490,7.87e-08,66;UBERON:0003350,6.51e-07,9;UBERON:0004808,6.51e-07,9;UBERON:0001277,6.51e-07,9 | |||
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| ||
|short_description=p2@B4galnt1 | |short_description=p2@B4galnt1 | ||
}} | }} |
Latest revision as of 17:27, 25 September 2015
Short description: | p2@B4galnt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_B4galnt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1223 |
Association with transcript: | 0bp_to_NM_001244618, NM_027739, uc007hie.2, uc007hif.2, uc007hig.2_5end |
EntrezGene: | B4galnt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 9.90e-10 | 32 |
hematopoietic oligopotent progenitor cell | 9.90e-10 | 32 |
hematopoietic stem cell | 9.90e-10 | 32 |
hematopoietic multipotent progenitor cell | 9.90e-10 | 32 |
connective tissue cell | 6.08e-08 | 46 |
mesenchymal cell | 6.08e-08 | 46 |
hematopoietic lineage restricted progenitor cell | 6.24e-08 | 25 |
T cell | 3.18e-07 | 11 |
pro-T cell | 3.18e-07 | 11 |
lymphoid lineage restricted progenitor cell | 5.28e-07 | 12 |
intestinal epithelial cell | 6.51e-07 | 9 |
epithelial cell of alimentary canal | 6.51e-07 | 9 |
leukocyte | 8.22e-07 | 17 |
nongranular leukocyte | 8.22e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 7.68e-25 | 118 |
endoderm | 7.68e-25 | 118 |
presumptive endoderm | 7.68e-25 | 118 |
digestive system | 2.11e-24 | 116 |
digestive tract | 2.11e-24 | 116 |
primitive gut | 2.11e-24 | 116 |
subdivision of digestive tract | 4.61e-23 | 114 |
gastrointestinal system | 3.86e-17 | 47 |
intestine | 1.21e-14 | 31 |
hemolymphoid system | 3.81e-12 | 48 |
immune system | 3.81e-12 | 48 |
organ component layer | 4.24e-12 | 24 |
mucosa | 8.59e-11 | 15 |
hematopoietic system | 1.56e-10 | 45 |
blood island | 1.56e-10 | 45 |
gut epithelium | 4.77e-10 | 55 |
intestinal mucosa | 1.47e-09 | 13 |
wall of intestine | 1.47e-09 | 13 |
gastrointestinal system mucosa | 1.47e-09 | 13 |
endo-epithelium | 1.87e-09 | 69 |
foregut | 7.24e-09 | 80 |
connective tissue | 6.08e-08 | 46 |
unilaminar epithelium | 7.87e-08 | 66 |
epithelium of mucosa | 6.51e-07 | 9 |
gastrointestinal system epithelium | 6.51e-07 | 9 |
intestinal epithelium | 6.51e-07 | 9 |