FFCP PHASE1:Mm9::chr19:3986564..3986579,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71670 | |EntrezGene=71670 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=355 | |||
|TSSclassifier=NA | |||
|UniProt=Q91XE4 | |UniProt=Q91XE4 | ||
|association_with_transcript=0bp_to_uc008fxx.1,uc008fxy.1_5end | |association_with_transcript=0bp_to_uc008fxx.1,uc008fxy.1_5end | ||
|cluster_id=chr19:3986564..3986579,+ | |||
|description=CAGE_peak_1_at_Acy3_5end | |description=CAGE_peak_1_at_Acy3_5end | ||
|id=chr19:3986564..3986579,+ | |id=chr19:3986564..3986579,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!1.93e-13!49;UBERON:0005173!1.93e-13!49;UBERON:0002417!1.93e-13!49;UBERON:0000916!1.93e-13!49;UBERON:0003914!4.91e-12!47;UBERON:0009569!3.36e-11!66;UBERON:0009854!2.08e-10!23;UBERON:0009856!2.08e-10!23;UBERON:0000160!3.85e-10!43;UBERON:0002107!5.37e-10!22;UBERON:0007499!5.37e-10!22;UBERON:0006925!5.37e-10!22;UBERON:0009497!5.37e-10!22;UBERON:0000015!5.37e-10!22;UBERON:0002423!5.37e-10!22;UBERON:0006235!5.37e-10!22;UBERON:0008835!5.37e-10!22;UBERON:0003894!5.37e-10!22;UBERON:0004161!5.37e-10!22;UBERON:0008836!5.37e-10!22;UBERON:0002365!1.24e-09!25;UBERON:0002330!1.24e-09!25;UBERON:0005177!1.57e-09!85;UBERON:0005256!7.62e-09!47;UBERON:0002100!1.26e-08!98;UBERON:0005409!5.00e-08!59;UBERON:0000344!2.50e-07!15;UBERON:0001007!8.17e-07!128;UBERON:0001555!8.17e-07!128;UBERON:0007026!8.17e-07!128 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005172,1.37e-13,49;UBERON:0005173,1.37e-13,49;UBERON:0002417,1.37e-13,49;UBERON:0000916,1.37e-13,49;UBERON:0003914,3.64e-12,47;UBERON:0003104,9.12e-12,61;UBERON:0009142,9.12e-12,61;UBERON:0000160,1.23e-11,31;UBERON:0009569,2.55e-11,66;UBERON:0005177,4.05e-11,79;UBERON:0009854,1.62e-10,23;UBERON:0009856,1.62e-10,23;UBERON:0002100,2.69e-10,90;UBERON:0002107,4.22e-10,22;UBERON:0007499,4.22e-10,22;UBERON:0006925,4.22e-10,22;UBERON:0009497,4.22e-10,22;UBERON:0000015,4.22e-10,22;UBERON:0002423,4.22e-10,22;UBERON:0006235,4.22e-10,22;UBERON:0008835,4.22e-10,22;UBERON:0003894,4.22e-10,22;UBERON:0004161,4.22e-10,22;UBERON:0008836,4.22e-10,22;UBERON:0002365,9.85e-10,25;UBERON:0002330,9.85e-10,25;UBERON:0005256,1.78e-09,45;UBERON:0005409,2.00e-08,47;UBERON:0000344,2.12e-07,15 | |||
|phase1_expression=2.40223270657191,49.5545078847893,38.6749353481106,76.523445460628,95.6710844197523,9.23335995515394,10.0453435456076,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0.137114433605739,0,143.978290225761,0.0992909512008853,0,36.4782723968967,30.5114343819336,25.2662064210609,22.3996238002719,24.3482492935055,53.5866042866974,28.983464922392,10.199603490144,1.90509202037889,7.99584223859941,15.8481681015439,7.51014211353314,5.48574329683025,5.71674197534634,0.418531630736908,0,0,0,0,0,10.5753327099485,9.52943153463437,7.34187008646726,5.47673941043627,1.74420125104357,2.41654801007919,1.94429899074283,1.53985063787899,1.43752564364972,0,0,0,4.63066984864705,7.44986943840768,5.15672092277442,0.202316460859598,0.528990979272033,0,2.03306719241479,3.55717918444456,0.899899717281399,1.97773272513395,2.1314403448383,1.79760066311043,2.68952813725088,0.207379224616955,0.270011876663381,0,1.99955689082663,1.98781686856452,0.244981598429908,0,0,0,1.14918604276669,1.22885226604995,0.263772575460388,0.274462930807229,0,0.558365998002762,1.12552522006336,1.37518422999129,0.589257170947335,0.996601765593721,0.745597783301202,0.681535739998656,0.906858721281426,18.2614627882057,64.531790773604,44.8781080247115,87.4319170453264,78.622946511168,76.164570806547,178.504857987457,5.45377032249785,4.1565760736459,4.94675404314476,3.23939865486365,10.2661181931454,2.54805239706646,0,3.030874574157,4.05375784760158,3.0331466700887,263.993129910467,1.55362730188303,15.4379824627418,5.20455980298408,7.91610243611567,9.68585088475446,8.59119051149949,9.52468527799209,15.3313241422204,12.3597483867187,21.5453041810668,0.884610551949874,4.04417124868523,3.09178125844551,0,16.775258509631,0.878342391034642,2.30391377494801,79.9580582802891,0.599075622529601,0.599902730993408,0.508280908292259,0.748953197024114,0.915001205637253,0.125654352112864,2.25971616249959,1.79000820131231,1.24672826735736,1.62241263067758,3.86989582631202,3.73220911830279,8.84529654517861,6.73413938836717,1.17108398666433,0.459804208866946,1.26043490863744,1.35634336052144,1.7009124787832,1.66547836370305,0.937017245597288,2.84573707812917,0.862271971731369,1.13463648100692,1.40760899331159,1.53437012699302,1.11218899690239,1.74126083261083,1.64625709126355,2.7864797354589,1.40442637462647,0,0.568326998791185,3.72826390563903,4.45599513964083,3.6012412292203,5.44512891845984,4.13204886669548,3.85667782218446,6.27841650826101,4.29237442239391,9.34122738937356,4.93679549740441,6.56669856316381,12.6467342891535,17.1053985287639,16.4662586468288,18.6546922076917,0.630869845692382,0.205809224758569,159.261853398191,82.5085767990258,1.49301775374664,1.85789337488351,3.99489130098489,8.47070803418039,10.229390016864,11.7939888189787,46.0293189698176,16.9639923365731,14.5774421104156,18.9008648439093,17.3518037536017,51.2327062932906,38.4725728776956,36.2437117322948,7.58671603812327,6.96915926919346,27.0498565615393,20.1614814566861,29.8686830238144,32.9638353484497,53.1819277215004,179.051109499257,254.337939103027,262.46576766167,133.403682189217,4.83850806576673,6.4864468387357,8.09503604585473,9.53442570525964,4.58236603529592,9.16653066413111,9.20627639842594,6.80967952455149,24.9850886001154,25.8782771749238,51.727591725922,64.2797606615995,98.0006046434794,88.2635274527808,70.4367541190516,4.98833613449833,2.4633883530163,1.95557971730431,1.18821560042632,3.98973422090454,5.3602002381381,6.42717830392237,6.04914308359176,4.09851374676097,2.6575762757853,3.6674596791222,3.76885623846197,4.31712454664739,4.77341893318988,0,0,3.93411418415229,3.03530420935206,4.81651769963376,6.21221938938677,0.983609672260053,5.04941854408746,10.0962630213202,10.9322848403059,11.8482868753039,5.4962823529087,4.67877215573028,4.81230102341015,8.09621403349789,7.89090816360542,7.90575555893047,0.963963949265421,3.97432238583152,4.27357448801413,4.56083486190013,5.44401405809367,3.98235415019888,3.8844901784797,2.72091201268276,3.20628635585027,5.31543407185391,7.37844355065426,9.04499026088774,5.81653967164009,5.34746067577082,3.16036757935816,2.10837217149998,3.09406629744561,3.06395645178409,1.08036656418786,2.71653235943784,1.50035924522115,1.59606210278046,4.10248280484762,2.63278432963394,2.74018454203139,2.11204537257339,1.69465656691056,6.61585194164886,1.6488625294148,3.06782410722221,1.99032652262914,1.43246812803764,1.14898629821543,27.9821603164657,9.6421157045465,1.02522528478712,3.50857675537478,3.1483069652851,2.0720530270516,1.23024804948923,1.37266903923914,0.679913719975421,2.09927178485487,0.829199842826543,8.59203556213602,4.27053591334533,2.23651413839534,2.48412283890143,1.67270636811575,4.36725127492355,4.04593039154462,7.52146447100557,4.97336289769656,13.8688021422218,10.5627683224777,1.69107881605257,5.08356256549528,4.13646226142744,3.11121901350476,1.93739735216597,3.21016638432478,3.63807439801837,4.1665403150064,2.09718688851422,0.966336483304024,2.59227005632079,0.948033361884535,2.22997736819181,1.64337531463724,1.16928740680016,0.179026695667481,0.993406773906324,0,1.03382669022204,0.605798699688886,0.609654453239999,0.705783295957884,0.487289403698762,0.384847366561318,0.350630706544707,0.906921534460845,1.55390167361845,0.538283139656854,1.51096154727671,4.82973985080476,4.31669693537719,2.56412273974171,0.643105137237198,6.52043735245972,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0.900642406448441,0,0,0.62272408550506,1.59609949360412,2.56100408631201,3.64660075602441,5.44994222832754,5.1476182366004,6.44515510624684,8.03536723231687,6.73930340142812,7.83361356467772,7.85785829659743,7.9223063382152,5.15028291084353,6.85069130732101,6.03072424033939,5.23923060411381,4.75125736373908,5.78727661391115,6.59337441285291,6.32955356577908,3.77156177623957,5.50174999093946,7.62995807831427,6.24989591519013,6.21121910741182,5.16149108139227,7.3171189149109,5.78753365163254,7.74083448921412,4.48913817326191,4.98267076121531,5.31924204828043,4.91077251803627,6.66228417099654,6.94463799532109,2.24829520144151,7.71974307869848,8.16510005383534,4.97349663378993,2.8676884485537,6.95603506861264 | |phase1_expression=2.40223270657191,49.5545078847893,38.6749353481106,76.523445460628,95.6710844197523,9.23335995515394,10.0453435456076,0,0,0,0,0,0,0,0.333109761815663,0.404950534779652,0,0,0.137114433605739,0,143.978290225761,0.0992909512008853,0,36.4782723968967,30.5114343819336,25.2662064210609,22.3996238002719,24.3482492935055,53.5866042866974,28.983464922392,10.199603490144,1.90509202037889,7.99584223859941,15.8481681015439,7.51014211353314,5.48574329683025,5.71674197534634,0.418531630736908,0,0,0,0,0,10.5753327099485,9.52943153463437,7.34187008646726,5.47673941043627,1.74420125104357,2.41654801007919,1.94429899074283,1.53985063787899,1.43752564364972,0,0,0,4.63066984864705,7.44986943840768,5.15672092277442,0.202316460859598,0.528990979272033,0,2.03306719241479,3.55717918444456,0.899899717281399,1.97773272513395,2.1314403448383,1.79760066311043,2.68952813725088,0.207379224616955,0.270011876663381,0,1.99955689082663,1.98781686856452,0.244981598429908,0,0,0,1.14918604276669,1.22885226604995,0.263772575460388,0.274462930807229,0,0.558365998002762,1.12552522006336,1.37518422999129,0.589257170947335,0.996601765593721,0.745597783301202,0.681535739998656,0.906858721281426,18.2614627882057,64.531790773604,44.8781080247115,87.4319170453264,78.622946511168,76.164570806547,178.504857987457,5.45377032249785,4.1565760736459,4.94675404314476,3.23939865486365,10.2661181931454,2.54805239706646,0,3.030874574157,4.05375784760158,3.0331466700887,263.993129910467,1.55362730188303,15.4379824627418,5.20455980298408,7.91610243611567,9.68585088475446,8.59119051149949,9.52468527799209,15.3313241422204,12.3597483867187,21.5453041810668,0.884610551949874,4.04417124868523,3.09178125844551,0,16.775258509631,0.878342391034642,2.30391377494801,79.9580582802891,0.599075622529601,0.599902730993408,0.508280908292259,0.748953197024114,0.915001205637253,0.125654352112864,2.25971616249959,1.79000820131231,1.24672826735736,1.62241263067758,3.86989582631202,3.73220911830279,8.84529654517861,6.73413938836717,1.17108398666433,0.459804208866946,1.26043490863744,1.35634336052144,1.7009124787832,1.66547836370305,0.937017245597288,2.84573707812917,0.862271971731369,1.13463648100692,1.40760899331159,1.53437012699302,1.11218899690239,1.74126083261083,1.64625709126355,2.7864797354589,1.40442637462647,0,0.568326998791185,3.72826390563903,4.45599513964083,3.6012412292203,5.44512891845984,4.13204886669548,3.85667782218446,6.27841650826101,4.29237442239391,9.34122738937356,4.93679549740441,6.56669856316381,12.6467342891535,17.1053985287639,16.4662586468288,18.6546922076917,0.630869845692382,0.205809224758569,159.261853398191,82.5085767990258,1.49301775374664,1.85789337488351,3.99489130098489,8.47070803418039,10.229390016864,11.7939888189787,46.0293189698176,16.9639923365731,14.5774421104156,18.9008648439093,17.3518037536017,51.2327062932906,38.4725728776956,36.2437117322948,7.58671603812327,6.96915926919346,27.0498565615393,20.1614814566861,29.8686830238144,32.9638353484497,53.1819277215004,179.051109499257,254.337939103027,262.46576766167,133.403682189217,4.83850806576673,6.4864468387357,8.09503604585473,9.53442570525964,4.58236603529592,9.16653066413111,9.20627639842594,6.80967952455149,24.9850886001154,25.8782771749238,51.727591725922,64.2797606615995,98.0006046434794,88.2635274527808,70.4367541190516,4.98833613449833,2.4633883530163,1.95557971730431,1.18821560042632,3.98973422090454,5.3602002381381,6.42717830392237,6.04914308359176,4.09851374676097,2.6575762757853,3.6674596791222,3.76885623846197,4.31712454664739,4.77341893318988,0,0,3.93411418415229,3.03530420935206,4.81651769963376,6.21221938938677,0.983609672260053,5.04941854408746,10.0962630213202,10.9322848403059,11.8482868753039,5.4962823529087,4.67877215573028,4.81230102341015,8.09621403349789,7.89090816360542,7.90575555893047,0.963963949265421,3.97432238583152,4.27357448801413,4.56083486190013,5.44401405809367,3.98235415019888,3.8844901784797,2.72091201268276,3.20628635585027,5.31543407185391,7.37844355065426,9.04499026088774,5.81653967164009,5.34746067577082,3.16036757935816,2.10837217149998,3.09406629744561,3.06395645178409,1.08036656418786,2.71653235943784,1.50035924522115,1.59606210278046,4.10248280484762,2.63278432963394,2.74018454203139,2.11204537257339,1.69465656691056,6.61585194164886,1.6488625294148,3.06782410722221,1.99032652262914,1.43246812803764,1.14898629821543,27.9821603164657,9.6421157045465,1.02522528478712,3.50857675537478,3.1483069652851,2.0720530270516,1.23024804948923,1.37266903923914,0.679913719975421,2.09927178485487,0.829199842826543,8.59203556213602,4.27053591334533,2.23651413839534,2.48412283890143,1.67270636811575,4.36725127492355,4.04593039154462,7.52146447100557,4.97336289769656,13.8688021422218,10.5627683224777,1.69107881605257,5.08356256549528,4.13646226142744,3.11121901350476,1.93739735216597,3.21016638432478,3.63807439801837,4.1665403150064,2.09718688851422,0.966336483304024,2.59227005632079,0.948033361884535,2.22997736819181,1.64337531463724,1.16928740680016,0.179026695667481,0.993406773906324,0,1.03382669022204,0.605798699688886,0.609654453239999,0.705783295957884,0.487289403698762,0.384847366561318,0.350630706544707,0.906921534460845,1.55390167361845,0.538283139656854,1.51096154727671,4.82973985080476,4.31669693537719,2.56412273974171,0.643105137237198,6.52043735245972,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0.675022500231806,0.900642406448441,0,0,0.62272408550506,1.59609949360412,2.56100408631201,3.64660075602441,5.44994222832754,5.1476182366004,6.44515510624684,8.03536723231687,6.73930340142812,7.83361356467772,7.85785829659743,7.9223063382152,5.15028291084353,6.85069130732101,6.03072424033939,5.23923060411381,4.75125736373908,5.78727661391115,6.59337441285291,6.32955356577908,3.77156177623957,5.50174999093946,7.62995807831427,6.24989591519013,6.21121910741182,5.16149108139227,7.3171189149109,5.78753365163254,7.74083448921412,4.48913817326191,4.98267076121531,5.31924204828043,4.91077251803627,6.66228417099654,6.94463799532109,2.24829520144151,7.71974307869848,8.16510005383534,4.97349663378993,2.8676884485537,6.95603506861264 | ||
|short_description=p1@Acy3 | |short_description=p1@Acy3 | ||
}} | }} |
Latest revision as of 17:33, 25 September 2015
Short description: | p1@Acy3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Acy3_5end |
Coexpression cluster: | MCL_coexpression_mm9:355 |
Association with transcript: | 0bp_to_uc008fxx.1, uc008fxy.1_5end |
EntrezGene: | Acy3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
abdomen element | 1.37e-13 | 49 |
abdominal segment element | 1.37e-13 | 49 |
abdominal segment of trunk | 1.37e-13 | 49 |
abdomen | 1.37e-13 | 49 |
epithelial tube | 3.64e-12 | 47 |
mesenchyme | 9.12e-12 | 61 |
entire embryonic mesenchyme | 9.12e-12 | 61 |
intestine | 1.23e-11 | 31 |
subdivision of trunk | 2.55e-11 | 66 |
trunk region element | 4.05e-11 | 79 |
digestive tract diverticulum | 1.62e-10 | 23 |
sac | 1.62e-10 | 23 |
trunk | 2.69e-10 | 90 |
liver | 4.22e-10 | 22 |
epithelial sac | 4.22e-10 | 22 |
digestive gland | 4.22e-10 | 22 |
epithelium of foregut-midgut junction | 4.22e-10 | 22 |
anatomical boundary | 4.22e-10 | 22 |
hepatobiliary system | 4.22e-10 | 22 |
foregut-midgut junction | 4.22e-10 | 22 |
hepatic diverticulum | 4.22e-10 | 22 |
liver primordium | 4.22e-10 | 22 |
septum transversum | 4.22e-10 | 22 |
liver bud | 4.22e-10 | 22 |
exocrine gland | 9.85e-10 | 25 |
exocrine system | 9.85e-10 | 25 |
trunk mesenchyme | 1.78e-09 | 45 |
gastrointestinal system | 2.00e-08 | 47 |
mucosa | 2.12e-07 | 15 |