FFCP PHASE1:Mm9::chr5:148241729..148241793,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr5:148241729..148241793,+
|short_description=p1@Pan3
|description=CAGE_peak_1_at_Pan3_5end
|association_with_transcript=-362bp_to_ENSMUST00000031651,ENSMUST00...") |
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(8 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=72587 | |EntrezGene=72587 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=298 | |||
|TSSclassifier=NA | |||
|UniProt=Q640Q5,F8VPL8 | |UniProt=Q640Q5,F8VPL8 | ||
|association_with_transcript=-362bp_to_ENSMUST00000031651,ENSMUST00000085571,NM_028291,uc009aod.2_5end | |||
|cluster_id=chr5:148241729..148241793,+ | |||
|description=CAGE_peak_1_at_Pan3_5end | |||
|id=chr5:148241729..148241793,+ | |||
|ontology_enrichment_celltype=CL:0000988!1.25e-07!32;CL:0002032!1.25e-07!32;CL:0000037!1.25e-07!32;CL:0000566!1.25e-07!32;CL:0000837!1.25e-07!32;CL:0002031!2.68e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.25e-07,32;CL:0002032,1.25e-07,32;CL:0000037,1.25e-07,32;CL:0000837,1.25e-07,32;CL:0002031,2.68e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.26e-10!45;UBERON:0003061!2.26e-10!45;UBERON:0004177!1.54e-08!29;UBERON:0002193!2.04e-08!48;UBERON:0006562!2.74e-07!24;UBERON:0001557!2.74e-07!24;UBERON:0001042!2.74e-07!24;UBERON:0008814!2.74e-07!24;UBERON:0009145!2.74e-07!24;UBERON:0003408!4.40e-07!24;UBERON:0002370!4.58e-07!23;UBERON:0000974!4.58e-07!23;UBERON:0004807!4.58e-07!23;UBERON:0005058!4.58e-07!23;UBERON:0003351!4.58e-07!23;UBERON:0009113!4.58e-07!23;UBERON:0003295!4.58e-07!23;UBERON:0009722!4.58e-07!23;UBERON:0005562!4.58e-07!23;UBERON:0007690!4.58e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.26e-10,45;UBERON:0003061,2.26e-10,45;UBERON:0000077,3.28e-09,35;UBERON:0004177,1.54e-08,29;UBERON:0005057,1.54e-08,29;UBERON:0002193,2.04e-08,48;UBERON:0002405,2.04e-08,48;UBERON:0006562,2.74e-07,24;UBERON:0001557,2.74e-07,24;UBERON:0001042,2.74e-07,24;UBERON:0008814,2.74e-07,24;UBERON:0009145,2.74e-07,24;UBERON:0003408,4.40e-07,24;UBERON:0002370,4.58e-07,23;UBERON:0000974,4.58e-07,23;UBERON:0004807,4.58e-07,23;UBERON:0005058,4.58e-07,23;UBERON:0003351,4.58e-07,23;UBERON:0009113,4.58e-07,23;UBERON:0003295,4.58e-07,23;UBERON:0009722,4.58e-07,23;UBERON:0005562,4.58e-07,23;UBERON:0007690,4.58e-07,23;UBERON:0007811,8.86e-07,36 | |||
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| ||
|short_description=p1@Pan3 | |||
}} | }} |
Latest revision as of 18:10, 25 September 2015
Short description: | p1@Pan3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pan3_5end |
Coexpression cluster: | MCL_coexpression_mm9:298 |
Association with transcript: | -362bp_to_ENSMUST00000031651, ENSMUST00000085571, NM_028291, uc009aod.2_5end |
EntrezGene: | Pan3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.25e-07 | 32 |
hematopoietic oligopotent progenitor cell | 1.25e-07 | 32 |
hematopoietic stem cell | 1.25e-07 | 32 |
hematopoietic multipotent progenitor cell | 1.25e-07 | 32 |
hematopoietic lineage restricted progenitor cell | 2.68e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.26e-10 | 45 |
blood island | 2.26e-10 | 45 |
mixed endoderm/mesoderm-derived structure | 3.28e-09 | 35 |
hemopoietic organ | 1.54e-08 | 29 |
immune organ | 1.54e-08 | 29 |
hemolymphoid system | 2.04e-08 | 48 |
immune system | 2.04e-08 | 48 |
pharynx | 2.74e-07 | 24 |
upper respiratory tract | 2.74e-07 | 24 |
chordate pharynx | 2.74e-07 | 24 |
pharyngeal arch system | 2.74e-07 | 24 |
pharyngeal region of foregut | 2.74e-07 | 24 |
gland of gut | 4.40e-07 | 24 |
thymus | 4.58e-07 | 23 |
neck | 4.58e-07 | 23 |
respiratory system epithelium | 4.58e-07 | 23 |
hemolymphoid system gland | 4.58e-07 | 23 |
pharyngeal epithelium | 4.58e-07 | 23 |
thymic region | 4.58e-07 | 23 |
pharyngeal gland | 4.58e-07 | 23 |
entire pharyngeal arch endoderm | 4.58e-07 | 23 |
thymus primordium | 4.58e-07 | 23 |
early pharyngeal endoderm | 4.58e-07 | 23 |
craniocervical region | 8.86e-07 | 36 |