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FFCP PHASE1:Mm9::chr10:128356246..128356283,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=19682
|EntrezGene=19682
|HGNC=
|HGNC=
|MCL_coexpression_id=96
|TSSclassifier=NA
|UniProt=D3Z0N7
|UniProt=D3Z0N7
|association_with_transcript=44bp_to_ENSMUST00000149961_5end
|association_with_transcript=44bp_to_ENSMUST00000149961_5end
|cluster_id=chr10:128356246..128356283,-
|description=CAGE_peak_2_at_Rdh5_5end
|description=CAGE_peak_2_at_Rdh5_5end
|id=chr10:128356246..128356283,-
|id=chr10:128356246..128356283,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0009854!1.26e-14!23;UBERON:0009856!1.26e-14!23;UBERON:0002107!3.14e-14!22;UBERON:0007499!3.14e-14!22;UBERON:0006925!3.14e-14!22;UBERON:0009497!3.14e-14!22;UBERON:0000015!3.14e-14!22;UBERON:0002423!3.14e-14!22;UBERON:0006235!3.14e-14!22;UBERON:0008835!3.14e-14!22;UBERON:0003894!3.14e-14!22;UBERON:0004161!3.14e-14!22;UBERON:0008836!3.14e-14!22;UBERON:0002365!6.13e-12!25;UBERON:0002330!6.13e-12!25;UBERON:0005172!5.69e-07!49;UBERON:0005173!5.69e-07!49;UBERON:0002417!5.69e-07!49;UBERON:0000916!5.69e-07!49
|ontology_enrichment_uberon=UBERON:0009854!1.26e-14!23;UBERON:0009856!1.26e-14!23;UBERON:0002107!3.14e-14!22;UBERON:0007499!3.14e-14!22;UBERON:0006925!3.14e-14!22;UBERON:0009497!3.14e-14!22;UBERON:0000015!3.14e-14!22;UBERON:0002423!3.14e-14!22;UBERON:0006235!3.14e-14!22;UBERON:0008835!3.14e-14!22;UBERON:0003894!3.14e-14!22;UBERON:0004161!3.14e-14!22;UBERON:0008836!3.14e-14!22;UBERON:0002365!6.13e-12!25;UBERON:0002330!6.13e-12!25;UBERON:0005172!5.69e-07!49;UBERON:0005173!5.69e-07!49;UBERON:0002417!5.69e-07!49;UBERON:0000916!5.69e-07!49
|ontology_enrichment_uberon_v019_2=UBERON:0009854,4.17e-24,23;UBERON:0009856,4.17e-24,23;UBERON:0002107,1.89e-23,22;UBERON:0007499,1.89e-23,22;UBERON:0006925,1.89e-23,22;UBERON:0009497,1.89e-23,22;UBERON:0000015,1.89e-23,22;UBERON:0002423,1.89e-23,22;UBERON:0006235,1.89e-23,22;UBERON:0008835,1.89e-23,22;UBERON:0003894,1.89e-23,22;UBERON:0004161,1.89e-23,22;UBERON:0008836,1.89e-23,22;UBERON:0002365,1.15e-19,25;UBERON:0002330,1.15e-19,25;UBERON:0000160,6.10e-12,31;UBERON:0005172,1.55e-10,49;UBERON:0005173,1.55e-10,49;UBERON:0002417,1.55e-10,49;UBERON:0000916,1.55e-10,49;UBERON:0004921,1.40e-09,114;UBERON:0001007,3.45e-09,116;UBERON:0001555,3.45e-09,116;UBERON:0007026,3.45e-09,116;UBERON:0004119,8.22e-09,118;UBERON:0000925,8.22e-09,118;UBERON:0006595,8.22e-09,118;UBERON:0003929,4.83e-08,55;UBERON:0005256,1.10e-07,45;UBERON:0005409,2.01e-07,47;UBERON:0003914,4.41e-07,47;UBERON:0003104,6.61e-07,61;UBERON:0009142,6.61e-07,61
|phase1_expression=0.320297694209588,0.697950815278722,2.27499619694768,5.44435580352294,4.00716583957078,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0.639969691173627,0.91763712426868,0.57423196411502,1.7230479846363,0.861884930743556,4.94060890586572,2.01624103807945,0,0,0,0,1.73310971850765,0.831173226792462,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.183546752161682,0,1.09012578190223,2.85592037554813,4.08302788055995,0.699932108126813,0,0,0,0,0.257259436035947,0,0,0.202316460859598,0.528990979272033,0,0,0.889294796111139,0,0,0,4.19440154725767,7.68436610643109,0,0,0,3.42781181284564,2.65042249141936,0,0.0958454710182364,0,0,0.766124028511126,0.921639199537461,0,0.182975287204819,0,0.558365998002762,0.56276261003168,0.763991238884051,0.294628585473668,1.56608848879013,0.745597783301202,1.06016670666458,1.43585964202892,0,22.371020801516,35.358509352803,29.1439723484421,25.9910566979068,27.3296401129375,6.03911006566533,0,0,0,0.704217098883403,0,0,0,0,0,0,11.5325718516251,0,0,0.173485326766136,0,0.922461989024234,0.301445281105245,0.470354828542819,0.376999773989026,0.988779870937496,0.144599356919912,0,0.161766849947409,0,0,1.86391761218122,1.17112318804619,1.04723353406728,4.08731288333746,0,0,0,1.04853447583376,1.37250180845588,0,0.521472960576829,0.511430914660661,1.24672826735736,0,0.101839363850316,0,0.505445516867349,1.68353484709179,0.650602214813519,0.689706313300419,0.720248519221397,1.35634336052144,1.83698547708585,2.0498195245576,2.62364828767241,4.65666067330228,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0.703578179943289,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.405344047729279,0.584799949701329,0.219550115291051,0.402619256281115,2.73376933133365,0.617427674275707,16.5209391491899,3.70230793328962,0,0,0.257734922644187,2.21851877085677,3.7804267453628,6.65789691393957,4.2707615539006,2.79988223030818,7.79139147280835,9.94782360205754,7.40863531052657,4.49409704327111,3.6743468478698,2.38969527905241,0.189667900953082,0.114248512609729,0,0.407302655690628,1.16371492300575,0.350679099451593,1.20149420536089,1.77132177575523,3.45397201251025,2.59134044235781,15.7119892356189,2.16898637430922,4.91397487783007,4.49724224769707,10.5487263122022,13.5059209461353,14.5136735515409,6.90470729881945,17.5106044917038,92.2526348311954,43.1304619582064,104.943747242518,103.908545147149,41.1703571053792,29.2417784040717,31.8412724099822,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0.481651769963376,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0.283076530788832,0,0,0,0.963963949265421,0,0.178065603667255,0.162886959353576,0,0,0.728341908464944,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0,0,0.129358683782755,0.428674070063185,0.354680467284547,0,0.164549020602121,0.608929898229199,0,0,0.220528398054962,0.32977250588296,0,0.0603129249281559,0.238744688006273,0.164140899745061,1.45740418314925,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0.209088296014469,0.218362563746178,4.18079473792944,6.86023682520288,0.26175594198403,0.518459893167171,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0,0.168956125490778,0.117357238645754,1.69265700297135,0,0,0,0.316011120628178,0,0.410843828659309,0,0.358053391334963,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0.906921534460845,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0.103787347584177,0,1.53660245178721,2.43106717068294,1.46729213839588,1.10306105070008,0.666740183404846,1.23621034343337,1.28367683836726,0,1.2673964994512,0.188626341386076,1.03005658216871,0.384150914429216,0.574354689556133,1.42888107384922,0.347652977834566,1.15745532278223,0.412085900803307,0.588795680537589,0.342869252385415,0.354951612318675,0.238436189947321,0.872078499793971,0.846984423737976,0.507687647350059,0.914639864363863,0.526139422875686,0.679020569229309,0,0.949080144993393,0.591026894253381,0.409231043169689,0.929621047115796,1.35034627686799,0,1.16965804222704,1.50409737833809,0.57386499620653,0.661774257358546,0.695603506861264
|phase1_expression=0.320297694209588,0.697950815278722,2.27499619694768,5.44435580352294,4.00716583957078,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0.639969691173627,0.91763712426868,0.57423196411502,1.7230479846363,0.861884930743556,4.94060890586572,2.01624103807945,0,0,0,0,1.73310971850765,0.831173226792462,0.204169356262369,0,0,0,0,0,0,0.251793635951155,0.304130793658544,0.183546752161682,0,1.09012578190223,2.85592037554813,4.08302788055995,0.699932108126813,0,0,0,0,0.257259436035947,0,0,0.202316460859598,0.528990979272033,0,0,0.889294796111139,0,0,0,4.19440154725767,7.68436610643109,0,0,0,3.42781181284564,2.65042249141936,0,0.0958454710182364,0,0,0.766124028511126,0.921639199537461,0,0.182975287204819,0,0.558365998002762,0.56276261003168,0.763991238884051,0.294628585473668,1.56608848879013,0.745597783301202,1.06016670666458,1.43585964202892,0,22.371020801516,35.358509352803,29.1439723484421,25.9910566979068,27.3296401129375,6.03911006566533,0,0,0,0.704217098883403,0,0,0,0,0,0,11.5325718516251,0,0,0.173485326766136,0,0.922461989024234,0.301445281105245,0.470354828542819,0.376999773989026,0.988779870937496,0.144599356919912,0,0.161766849947409,0,0,1.86391761218122,1.17112318804619,1.04723353406728,4.08731288333746,0,0,0,1.04853447583376,1.37250180845588,0,0.521472960576829,0.511430914660661,1.24672826735736,0,0.101839363850316,0,0.505445516867349,1.68353484709179,0.650602214813519,0.689706313300419,0.720248519221397,1.35634336052144,1.83698547708585,2.0498195245576,2.62364828767241,4.65666067330228,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0.703578179943289,0,0,0,0,0,0,0,0.16455984991348,0.164167464079095,0.405344047729279,0.584799949701329,0.219550115291051,0.402619256281115,2.73376933133365,0.617427674275707,16.5209391491899,3.70230793328962,0,0,0.257734922644187,2.21851877085677,3.7804267453628,6.65789691393957,4.2707615539006,2.79988223030818,7.79139147280835,9.94782360205754,7.40863531052657,4.49409704327111,3.6743468478698,2.38969527905241,0.189667900953082,0.114248512609729,0,0.407302655690628,1.16371492300575,0.350679099451593,1.20149420536089,1.77132177575523,3.45397201251025,2.59134044235781,15.7119892356189,2.16898637430922,4.91397487783007,4.49724224769707,10.5487263122022,13.5059209461353,14.5136735515409,6.90470729881945,17.5106044917038,92.2526348311954,43.1304619582064,104.943747242518,103.908545147149,41.1703571053792,29.2417784040717,31.8412724099822,0.369506380333209,0.189491411770485,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0.195133647857799,0,0.221464689648775,0,0,0.172684981865896,0,0,0,0,0,0.481651769963376,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0.283076530788832,0,0,0,0.963963949265421,0,0.178065603667255,0.162886959353576,0,0,0.728341908464944,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0.712994756769443,0.632073515871632,0,0,0,0,0.129358683782755,0.428674070063185,0.354680467284547,0,0.164549020602121,0.608929898229199,0,0,0.220528398054962,0.32977250588296,0,0.0603129249281559,0.238744688006273,0.164140899745061,1.45740418314925,1.11255181206306,0,0,0,0,0,0,0,0,0,0,0,0,0.432021363287205,0.209088296014469,0.218362563746178,4.18079473792944,6.86023682520288,0.26175594198403,0.518459893167171,0.621339313086926,0,0.149516546043979,0.165458490457098,0,0,0.168956125490778,0.117357238645754,1.69265700297135,0,0,0,0.316011120628178,0,0.410843828659309,0,0.358053391334963,0,0.120195449519969,0,0,0,0.100826185136841,0,0,0,0.906921534460845,0,0,0,0.19318959403219,0.187682475451182,0,0,0,0,0,0,0,0,0,0.675022500231806,0,0,0,0.103787347584177,0,1.53660245178721,2.43106717068294,1.46729213839588,1.10306105070008,0.666740183404846,1.23621034343337,1.28367683836726,0,1.2673964994512,0.188626341386076,1.03005658216871,0.384150914429216,0.574354689556133,1.42888107384922,0.347652977834566,1.15745532278223,0.412085900803307,0.588795680537589,0.342869252385415,0.354951612318675,0.238436189947321,0.872078499793971,0.846984423737976,0.507687647350059,0.914639864363863,0.526139422875686,0.679020569229309,0,0.949080144993393,0.591026894253381,0.409231043169689,0.929621047115796,1.35034627686799,0,1.16965804222704,1.50409737833809,0.57386499620653,0.661774257358546,0.695603506861264
|short_description=p2@Rdh5
|short_description=p2@Rdh5
}}
}}

Latest revision as of 19:31, 25 September 2015

Short description:p2@Rdh5
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Rdh5_5end
Coexpression cluster:MCL_coexpression_mm9:96
Association with transcript: 44bp_to_ENSMUST00000149961_5end
EntrezGene:Rdh5
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Rdh5

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I62.27
CD326+ enterocyte, pool1.CNhs13542.11848-124I35.44
CD326+ enterocyte, pool2.CNhs13197.11849-124I44.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I20.86
Ileum epithelium, pool1.CNhs13199.10252-104B94.94
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.73
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.25
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.08
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C84.19
Mouse Microglia, donor2.CNhs12634.11736-123E87.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.65
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.77
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.18
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.76
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.75
Mouse Schwann, donor1.CNhs12507.11728-123D91.06
Mouse Schwann, donor2.CNhs12573.11746-123F91.44
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F722.37
Mouse hepatocyte, donor1.CNhs13078.11714-123C435.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C829.14
Mouse hepatocyte, donor6.CNhs13090.11822-124F425.99
Mouse hepatocyte, donor8.CNhs13091.11824-124F627.33
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A76.04
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B611.53
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.92
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.99
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H74.09
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.05
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B20.00
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C60.65
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D41.36
eyeball, neonate N00.CNhs11207.633-15C61.84
eyeball, neonate N01.CNhs11140.1532-43E72.05
eyeball, neonate N02.CNhs11205.1551-44G82.62
eyeball, neonate N16.CNhs11188.777-19A24.66
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.41
heart, neonate N20.CNhs11127.821-26I60.58
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.40
hippocampus, adult.CNhs10478.13-16E82.73
hippocampus, neonate N00.CNhs11228.627-43G10.62
intestinal mucosa, adult.CNhs10506.860-29I316.52
intestine, adult.CNhs10496.178-9A33.70
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H42.22
intestine, embryo E17.CNhs10582.482-18D33.78
intestine, embryo E18.CNhs10526.1289-20F76.66
intestine, neonate N00.CNhs11126.644-26D14.27
intestine, neonate N01.CNhs11192.1322-23E92.80
intestine, neonate N06.CNhs11102.688-20B87.79
intestine, neonate N07.CNhs11095.720-20F29.95
intestine, neonate N10.CNhs11098.755-23A57.41
intestine, neonate N20.CNhs11187.827-18D14.49
intestine, neonate N25.CNhs11121.1352-25E33.67
intestine, neonate N30.CNhs11131.1384-42G12.39
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D51.20
kidney, neonate N20.CNhs11113.832-19I11.77
kidney, neonate N25.CNhs11122.1353-25F33.45
kidney, neonate N30.CNhs11203.1385-42H12.59
liver, adult pregnant day01.CNhs10466.508-5B215.71
liver, embryo E12.CNhs10601.355-15F82.17
liver, embryo E13.CNhs10524.378-3H64.91
liver, embryo E14.CNhs10594.409-16E14.50
liver, embryo E15.CNhs10520.433-16D710.55
liver, embryo E16.CNhs10523.462-17F513.51
liver, embryo E17.CNhs10510.481-18A314.51
liver, embryo E18.CNhs10579.499-43G46.90
liver, neonate N00.CNhs11117.641-24F417.51
liver, neonate N03.CNhs11123.1345-25G292.25
liver, neonate N06.CNhs11101.684-20A843.13
liver, neonate N07.CNhs11103.716-20H2104.94
liver, neonate N10.CNhs11115.751-24B9103.91
liver, neonate N20.CNhs11220.823-25A341.17
liver, neonate N25.CNhs11198.1368-26H129.24
liver, neonate N30.CNhs11106.1382-42D131.84
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.43
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.16
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C91.11
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.43
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B84.18
stomach, neonate N07.CNhs11210.718-18A96.86
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I41.69
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.36
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.00
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.27
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.85
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.68
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.93
whole body, embryo E17.5.CNhs10513.490-9F91.35
whole body, embryo E17.CNhs10517.475-3I50.00
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.57
whole body, neonate N06.CNhs10515.692-21D10.66
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
digestive tract diverticulum4.17e-2423
sac4.17e-2423
liver1.89e-2322
epithelial sac1.89e-2322
digestive gland1.89e-2322
epithelium of foregut-midgut junction1.89e-2322
anatomical boundary1.89e-2322
hepatobiliary system1.89e-2322
foregut-midgut junction1.89e-2322
hepatic diverticulum1.89e-2322
liver primordium1.89e-2322
septum transversum1.89e-2322
liver bud1.89e-2322
exocrine gland1.15e-1925
exocrine system1.15e-1925
intestine6.10e-1231
abdomen element1.55e-1049
abdominal segment element1.55e-1049
abdominal segment of trunk1.55e-1049
abdomen1.55e-1049
subdivision of digestive tract1.40e-09114
digestive system3.45e-09116
digestive tract3.45e-09116
primitive gut3.45e-09116
endoderm-derived structure8.22e-09118
endoderm8.22e-09118
presumptive endoderm8.22e-09118
gut epithelium4.83e-0855
trunk mesenchyme1.10e-0745
gastrointestinal system2.01e-0747
epithelial tube4.41e-0747
mesenchyme6.61e-0761
entire embryonic mesenchyme6.61e-0761
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