FFCP PHASE1:Mm9::chr14:30822301..30822332,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr14:30822301..30822332,+
|short_description=p2@Chdh
|description=CAGE_peak_2_at_Chdh_5end
|association_with_transcript=13bp_to_ENSMUST00000022556_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=218865 | |EntrezGene=218865 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=24 | |||
|TSSclassifier=NA | |||
|UniProt=F8WIG7 | |UniProt=F8WIG7 | ||
|association_with_transcript=13bp_to_ENSMUST00000022556_5end | |||
|cluster_id=chr14:30822301..30822332,+ | |||
|description=CAGE_peak_2_at_Chdh_5end | |||
|id=chr14:30822301..30822332,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.83e-07!9;CL:0002251!1.83e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,5.32e-10,9;CL:0002251,5.32e-10,9;CL:0000066,5.93e-08,25;CL:0000239,1.44e-07,6;CL:0000677,1.44e-07,6;CL:0000584,1.44e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!2.69e-16!130;UBERON:0000925!2.69e-16!130;UBERON:0006595!2.69e-16!130;UBERON:0001007!2.79e-15!128;UBERON:0001555!2.79e-15!128;UBERON:0007026!2.79e-15!128;UBERON:0004921!3.58e-14!126;UBERON:0004185!3.58e-14!126;UBERON:0000160!7.62e-13!43;UBERON:0000344!1.36e-11!15;UBERON:0001242!2.84e-10!13;UBERON:0000060!2.84e-10!13;UBERON:0001262!2.84e-10!13;UBERON:0004786!2.84e-10!13;UBERON:0005409!3.29e-10!59;UBERON:0003929!5.56e-10!55;UBERON:0007023!1.13e-07!51;UBERON:0005911!1.71e-07!69;UBERON:0003350!1.83e-07!9;UBERON:0004808!1.83e-07!9;UBERON:0001277!1.83e-07!9;UBERON:0004923!2.60e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.95e-19,31;UBERON:0004119,1.37e-18,118;UBERON:0000925,1.37e-18,118;UBERON:0006595,1.37e-18,118;UBERON:0001007,2.93e-17,116;UBERON:0001555,2.93e-17,116;UBERON:0007026,2.93e-17,116;UBERON:0000344,6.78e-16,15;UBERON:0004921,8.16e-16,114;UBERON:0005409,2.32e-15,47;UBERON:0001242,5.22e-14,13;UBERON:0001262,5.22e-14,13;UBERON:0004786,5.22e-14,13;UBERON:0003929,1.29e-12,55;UBERON:0004923,6.55e-12,24;UBERON:0003350,5.32e-10,9;UBERON:0004808,5.32e-10,9;UBERON:0001277,5.32e-10,9;UBERON:0000490,1.23e-08,66;UBERON:0007023,1.64e-08,51;UBERON:0005911,8.34e-08,69;UBERON:0000485,1.28e-07,11;UBERON:0003100,3.75e-07,11 | |||
|phase1_expression=0.160148847104794,52.3463111459042,49.1399178540699,84.6899791659124,101.180937449162,21.6564260766338,18.4553986070465,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0.42438965179803,5.18764069921526,0,0,28.7986361028132,19.4997888907094,54.5520365909269,48.2453435698164,30.5969150413962,52.8265106088719,49.9019656924663,18.8470934057009,0,0,0,15.3091358468176,13.1325369833209,12.4543307320045,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.878744730937887,0.777719596297134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383062014255563,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,5.50742528533188,3.44169550792555,0.679971333707751,7.01614149129162,6.49776417447669,7.16843019355737,5.05599912474307,0,0,0,0.422530259330042,0,0,0,0,0,0.505524445014783,8.79215873836762,0,0.29688427812965,0,0,0.230615497256059,0,0,0.251333182659351,16.0676729027343,1.44599356919912,0,0.161766849947409,0,0,11.1835056730873,0,0,29.8884754594052,0.239630249011841,0,0,0.149790639404823,0,0,0,0.255715457330331,0.20778804455956,0.162241263067758,1.12023300235348,1.7416975885413,4.80173241023982,13.6787206326208,0,0,0.360124259610698,0,0,0.12811372028485,0.0937017245597288,2.58703370739016,0,0,0.175951124163949,0.219195732427575,0.556094498451196,2.089512999133,1.64625709126355,0.199034266818493,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.210289948564127,0,35.6852285622502,21.4204958997471,0,0,0.38660238396628,1.00841762311671,0.667134131534611,1.71203063501303,27.0481565080372,3.78807595865225,3.2673577144035,5.17286827306992,6.04388670069272,30.5598598942435,20.9653908378453,33.2565926334793,0,0.228497025219458,0,0.203651327845314,0.581857461502877,0.841629838683823,3.41477300470989,5.16635517928608,5.18095801876537,5.67626954040282,4.15033677922008,0,0.196558995113203,0.224862112384854,0,0.72353147925725,0.25462585178142,0.575392274901621,0.810676133875177,1.64736847912849,4.31304619582064,5.58211421502755,3.43241440426017,4.04126204715379,4.66433275156972,5.30687873499704,0.184753190166605,0,0,0,0.234690248288502,0.837531287209079,0.714130922658041,0.975668239288994,0,0,0.159454768657487,0.327726629431476,0,0.289298117163023,0,0,4.42587845717133,2.75936746304733,0.321101179975584,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,2.2710413633323,1.95872164033981,1.30309567482861,5.27904393512113,1.32745138339963,0.242780636154981,0,0.188605079755898,0.295301892880773,0.307435147943927,1.29214146584111,1.45413491791002,0.356497378384721,0.948110273807448,0,2.06271086496374,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0,0.304464949114599,11.2642419870581,6.77862626764225,2.8668691747145,3.79238381765404,4.68246837418126,3.86002719540197,3.46179797609096,2.79039529566604,14.8655226681224,0.741701208042039,0,0,0,0,0,0,0,0.139951452323658,0,5.72802370809068,0,0,0.216010681643603,0.418176592028937,2.18362563746178,3.37160865962052,4.46328660916814,7.59092231753686,9.46189305030088,4.34937519160848,17.4744810992099,0.149516546043979,0,0.194451188344048,0.387479470433193,0.337912250981556,0.234714477291508,0.39061315453185,0.104859344425711,10.1465330746923,10.657110231541,4.4241556887945,1.82452693761148,2.36235201479103,5.06691209613401,4.29664069601955,4.17230845040656,6.49055427407832,5.1691334511102,5.45218829719997,5.86792411243499,4.7388307014315,3.41102582589133,6.25376970662141,7.59699864180198,0.680191150845634,1.33191572024439,0.0897138566094757,1.51096154727671,0.579568782096571,6.75656911624255,15.7510396869848,4.93047271881851,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,0,0.824140228955577,0.320919209591815,0.505394423527595,1.52087579934144,1.32038438970253,0.468207537349412,0.192075457214608,0.34461281373368,0,0.347652977834566,0.77163688185482,0.412085900803307,0.588795680537589,0.685738504770831,0.354951612318675,0.476872379894642,0.290692833264657,0.658765662907314,0.846146078916765,0.365855945745545,0.526139422875686,0.679020569229309,0,0.711810108745045,0.689531376628944,0,0.309873682371932,0.192906610981141,0,0.935726433781634,1.93383948643468,0.57386499620653,0.441182838239031,0.231867835620421 | |phase1_expression=0.160148847104794,52.3463111459042,49.1399178540699,84.6899791659124,101.180937449162,21.6564260766338,18.4553986070465,0,0,0,0,0,0,0.0874204024189974,0,0,0,0,0,0.42438965179803,5.18764069921526,0,0,28.7986361028132,19.4997888907094,54.5520365909269,48.2453435698164,30.5969150413962,52.8265106088719,49.9019656924663,18.8470934057009,0,0,0,15.3091358468176,13.1325369833209,12.4543307320045,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0.878744730937887,0.777719596297134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383062014255563,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,5.50742528533188,3.44169550792555,0.679971333707751,7.01614149129162,6.49776417447669,7.16843019355737,5.05599912474307,0,0,0,0.422530259330042,0,0,0,0,0,0.505524445014783,8.79215873836762,0,0.29688427812965,0,0,0.230615497256059,0,0,0.251333182659351,16.0676729027343,1.44599356919912,0,0.161766849947409,0,0,11.1835056730873,0,0,29.8884754594052,0.239630249011841,0,0,0.149790639404823,0,0,0,0.255715457330331,0.20778804455956,0.162241263067758,1.12023300235348,1.7416975885413,4.80173241023982,13.6787206326208,0,0,0.360124259610698,0,0,0.12811372028485,0.0937017245597288,2.58703370739016,0,0,0.175951124163949,0.219195732427575,0.556094498451196,2.089512999133,1.64625709126355,0.199034266818493,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0.210289948564127,0,35.6852285622502,21.4204958997471,0,0,0.38660238396628,1.00841762311671,0.667134131534611,1.71203063501303,27.0481565080372,3.78807595865225,3.2673577144035,5.17286827306992,6.04388670069272,30.5598598942435,20.9653908378453,33.2565926334793,0,0.228497025219458,0,0.203651327845314,0.581857461502877,0.841629838683823,3.41477300470989,5.16635517928608,5.18095801876537,5.67626954040282,4.15033677922008,0,0.196558995113203,0.224862112384854,0,0.72353147925725,0.25462585178142,0.575392274901621,0.810676133875177,1.64736847912849,4.31304619582064,5.58211421502755,3.43241440426017,4.04126204715379,4.66433275156972,5.30687873499704,0.184753190166605,0,0,0,0.234690248288502,0.837531287209079,0.714130922658041,0.975668239288994,0,0,0.159454768657487,0.327726629431476,0,0.289298117163023,0,0,4.42587845717133,2.75936746304733,0.321101179975584,0.117211686592203,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,2.2710413633323,1.95872164033981,1.30309567482861,5.27904393512113,1.32745138339963,0.242780636154981,0,0.188605079755898,0.295301892880773,0.307435147943927,1.29214146584111,1.45413491791002,0.356497378384721,0.948110273807448,0,2.06271086496374,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0,0.304464949114599,11.2642419870581,6.77862626764225,2.8668691747145,3.79238381765404,4.68246837418126,3.86002719540197,3.46179797609096,2.79039529566604,14.8655226681224,0.741701208042039,0,0,0,0,0,0,0,0.139951452323658,0,5.72802370809068,0,0,0.216010681643603,0.418176592028937,2.18362563746178,3.37160865962052,4.46328660916814,7.59092231753686,9.46189305030088,4.34937519160848,17.4744810992099,0.149516546043979,0,0.194451188344048,0.387479470433193,0.337912250981556,0.234714477291508,0.39061315453185,0.104859344425711,10.1465330746923,10.657110231541,4.4241556887945,1.82452693761148,2.36235201479103,5.06691209613401,4.29664069601955,4.17230845040656,6.49055427407832,5.1691334511102,5.45218829719997,5.86792411243499,4.7388307014315,3.41102582589133,6.25376970662141,7.59699864180198,0.680191150845634,1.33191572024439,0.0897138566094757,1.51096154727671,0.579568782096571,6.75656911624255,15.7510396869848,4.93047271881851,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.551530525350042,0,0.824140228955577,0.320919209591815,0.505394423527595,1.52087579934144,1.32038438970253,0.468207537349412,0.192075457214608,0.34461281373368,0,0.347652977834566,0.77163688185482,0.412085900803307,0.588795680537589,0.685738504770831,0.354951612318675,0.476872379894642,0.290692833264657,0.658765662907314,0.846146078916765,0.365855945745545,0.526139422875686,0.679020569229309,0,0.711810108745045,0.689531376628944,0,0.309873682371932,0.192906610981141,0,0.935726433781634,1.93383948643468,0.57386499620653,0.441182838239031,0.231867835620421 | ||
|short_description=p2@Chdh | |||
}} | }} |
Latest revision as of 20:38, 25 September 2015
Short description: | p2@Chdh |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Chdh_5end |
Coexpression cluster: | MCL_coexpression_mm9:24 |
Association with transcript: | 13bp_to_ENSMUST00000022556_5end |
EntrezGene: | Chdh |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 5.32e-10 | 9 |
epithelial cell of alimentary canal | 5.32e-10 | 9 |
epithelial cell | 5.93e-08 | 25 |
brush border epithelial cell | 1.44e-07 | 6 |
gut absorptive cell | 1.44e-07 | 6 |
enterocyte | 1.44e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.95e-19 | 31 |
endoderm-derived structure | 1.37e-18 | 118 |
endoderm | 1.37e-18 | 118 |
presumptive endoderm | 1.37e-18 | 118 |
digestive system | 2.93e-17 | 116 |
digestive tract | 2.93e-17 | 116 |
primitive gut | 2.93e-17 | 116 |
mucosa | 6.78e-16 | 15 |
subdivision of digestive tract | 8.16e-16 | 114 |
gastrointestinal system | 2.32e-15 | 47 |
intestinal mucosa | 5.22e-14 | 13 |
wall of intestine | 5.22e-14 | 13 |
gastrointestinal system mucosa | 5.22e-14 | 13 |
gut epithelium | 1.29e-12 | 55 |
organ component layer | 6.55e-12 | 24 |
epithelium of mucosa | 5.32e-10 | 9 |
gastrointestinal system epithelium | 5.32e-10 | 9 |
intestinal epithelium | 5.32e-10 | 9 |
unilaminar epithelium | 1.23e-08 | 66 |
adult organism | 1.64e-08 | 51 |
endo-epithelium | 8.34e-08 | 69 |
simple columnar epithelium | 1.28e-07 | 11 |
female organism | 3.75e-07 | 11 |