FFCP PHASE1:Mm9::chr2:146337682..146337715,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=241694 | |EntrezGene=241694 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=A3KGS3,B1AYA6,B2RX86 | |UniProt=A3KGS3,B1AYA6,B2RX86 | ||
|association_with_transcript=24bp_to_ENSMUST00000109986,ENSMUST00000135974,NM_001033348,uc008msj.2,uc008msm.1,uc008msn.1_5end | |association_with_transcript=24bp_to_ENSMUST00000109986,ENSMUST00000135974,NM_001033348,uc008msj.2,uc008msm.1,uc008msn.1_5end | ||
|cluster_id=chr2:146337682..146337715,- | |||
|description=CAGE_peak_3_at_Ralgapa2_5end | |description=CAGE_peak_3_at_Ralgapa2_5end | ||
|id=chr2:146337682..146337715,- | |id=chr2:146337682..146337715,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003914!1.97e-07!47;UBERON:0000025!9.73e-07!114 | |ontology_enrichment_uberon=UBERON:0003914!1.97e-07!47;UBERON:0000025!9.73e-07!114 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003914,6.67e-09,47;UBERON:0007100,8.02e-08,18;UBERON:0000948,8.02e-08,18;UBERON:0005498,8.02e-08,18;UBERON:0004140,8.02e-08,18;UBERON:0009881,8.02e-08,18;UBERON:0004141,8.02e-08,18;UBERON:0003084,8.02e-08,18;UBERON:0007005,8.02e-08,18;UBERON:0004139,8.02e-08,18;UBERON:0004291,8.02e-08,18;UBERON:0003103,2.50e-07,43;UBERON:0004535,2.77e-07,23;UBERON:0001009,2.77e-07,23;UBERON:0001048,3.70e-07,134 | |||
|phase1_expression=1.28119077683835,0.697950815278722,0.909998478779072,0.60492842261366,1.00179145989269,1.00727563147134,0.934450562382103,0.516493293766305,2.956563165185,4.21316147379588,0.856089841127525,0.717949430958028,0.171200729931206,0.34968160967599,0.333109761815663,0.404950534779652,0.699561878128147,0.315462165358238,0.137114433605739,0,4.25216450755349,2.78014663362479,2.08959831311148,0.639969691173627,0,1.14846392823004,0,1.07735616342945,0.570070258369122,0.504060259519861,0.443461021310609,0.635030673459631,0.61506478758457,0,0.288851619751275,0.332469290716985,0.612508068787107,0.418531630736908,0.7813353445238,0,0,0,0.485510353031154,0.629484089877886,0.506884656097573,0,0,1.30815093828268,0.219686182734472,0.58328969722285,0.139986421625363,0,0.503347818173209,0,1.68046899571232,0.514518872071894,0.573066879877513,0.515672092277442,2.22548106945558,3.1739458756322,0,0,0,0,0,0,0,0.768436610643109,0.725827286159344,2.02508907497536,0.630974884054146,1.99955689082663,1.10434270475807,1.22490799214954,0.479227355091182,0,2.20231761998777,1.65993539510744,0.921639199537461,0.923204014111357,0.914876436024097,0,0.279182999001381,2.25105044012672,0.763991238884051,2.65165726926301,2.56269025438385,2.23679334990361,0.757261933331841,0.68014404096107,20.0006497204158,1.72084775396277,5.439770669662,0,0,1.79210754838934,0.983110940922263,0.340860645156116,0,0.35333957451034,2.81686839553361,1.28326477414318,5.09610479413291,0,0.216491041011214,0.253359865475099,0,1.94112595522402,0.776813650941515,0.742210695324124,0.693941307064543,0,0.230615497256059,0.753613202763113,1.29347577849275,0.502666365318702,1.48316980640624,7.37456720291549,1.76922110389975,0,0.441683036920787,1.45462575940567,0,2.04946557908083,2.09446706813455,0.255457055208591,2.03685711660064,1.19980546198682,0.889491589511453,0.748953197024114,0.457500602818626,0.502617408451458,1.21677024134594,1.27857728665165,0.62336413367868,0.811206315338788,1.01839363850316,0.870848794270651,1.26361379216837,0.420883711772948,1.43132487258974,0.689706313300419,1.26043490863744,1.20563854268572,2.10913147369116,1.7935920839879,1.12442069471675,2.58703370739016,0.646703978798527,0.756424320671277,0.351902248327898,0.43839146485515,0.556094498451196,1.0447564995665,0,1.39323986772945,1.40442637462647,0.772043721344145,0.568326998791185,1.65700618028402,1.40715635988658,1.80062061461015,1.42046841351126,2.36117078096885,2.1597395804233,2.55787339225449,3.21928081679543,3.61972561338225,4.44311594766397,3.94001913789829,4.78305976320549,5.4093995347373,6.80605357402257,5.63666958793561,0.841159794256509,0.617427674275707,0,0.793351699990633,0.639864751605702,0.696710015581316,1.15980715189884,0.403367049246685,0,0.570676878337677,0.474529061544512,0,0.754005626400808,0.795825888164603,0.58489226135736,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,1.14248512609729,2.25415471346161,0.610953983535943,1.16371492300575,1.47285221769669,1.20149420536089,1.91893192373483,1.09899109488962,1.1105744752962,1.1858105083486,0.333690211432188,0.589676985339609,0.674586337154561,1.01430060694251,1.20588579876208,0.50925170356284,0.863088412352432,2.59416362840057,2.19649130550465,1.43768206527355,3.34926852901653,2.18426371180192,4.04126204715379,1.25578189465339,1.92977408545347,2.95605104266567,0.37898282354097,0.977789858652155,0.509235257325564,0.469380496577004,1.50755631697634,0.952174563544055,4.48807390072937,2.83743259391144,2.43611158613652,1.43509291791738,3.27726629431476,1.38147985492716,2.89298117163023,0,0.54390568381871,0.491764273019036,0.827810238914197,0.481651769963376,1.05490517932983,0.163934945376675,1.26235463602186,0.315508219416257,3.51394869866975,1.72338718186239,0.477937595905104,1.78238939265915,1.98153571552183,0.809621403349789,1.75353514746787,2.37172666767914,0.963963949265421,1.13552068166615,0.178065603667255,0.488660878060728,0.824850614862677,1.32745138339963,0.485561272309963,0.302323556964751,0.754420319023592,0,0,1.55056975900933,1.45413491791002,0.712994756769443,0,1.05418608574999,1.03135543248187,0,1.08036656418786,0.129358683782755,0.857348140126369,0.886701168211368,0.713475270408282,2.13913726782757,0.913394847343798,0,0,0.661585194164886,0.32977250588296,1.13025098687134,0.482503399425247,1.07435109602823,0.328281799490123,0.874442509889552,0.927126510052548,0.854354403989263,0.82554747185289,0.185194527369712,0.941842285023455,0.136694227721025,0.228778173206523,0.849892149969277,1.95932033253121,1.79659965945751,0.954670618015114,0.632671987162271,0.609958401380546,0.432021363287205,0.418176592028937,0.436725127492355,0.539457385539283,1.23980183588004,0.785267825952089,0.518459893167171,0.621339313086926,12.9649375897364,0.448549638131936,1.15820943319968,0.194451188344048,0.258319646955462,0.168956125490778,1.87771581833206,1.8228613878153,2.9360616439199,8.69702834973622,9.79302021276743,0.316011120628178,0,0.205421914329655,0.389762468933385,0.179026695667481,0.198681354781265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|phase1_expression=1.28119077683835,0.697950815278722,0.909998478779072,0.60492842261366,1.00179145989269,1.00727563147134,0.934450562382103,0.516493293766305,2.956563165185,4.21316147379588,0.856089841127525,0.717949430958028,0.171200729931206,0.34968160967599,0.333109761815663,0.404950534779652,0.699561878128147,0.315462165358238,0.137114433605739,0,4.25216450755349,2.78014663362479,2.08959831311148,0.639969691173627,0,1.14846392823004,0,1.07735616342945,0.570070258369122,0.504060259519861,0.443461021310609,0.635030673459631,0.61506478758457,0,0.288851619751275,0.332469290716985,0.612508068787107,0.418531630736908,0.7813353445238,0,0,0,0.485510353031154,0.629484089877886,0.506884656097573,0,0,1.30815093828268,0.219686182734472,0.58328969722285,0.139986421625363,0,0.503347818173209,0,1.68046899571232,0.514518872071894,0.573066879877513,0.515672092277442,2.22548106945558,3.1739458756322,0,0,0,0,0,0,0,0.768436610643109,0.725827286159344,2.02508907497536,0.630974884054146,1.99955689082663,1.10434270475807,1.22490799214954,0.479227355091182,0,2.20231761998777,1.65993539510744,0.921639199537461,0.923204014111357,0.914876436024097,0,0.279182999001381,2.25105044012672,0.763991238884051,2.65165726926301,2.56269025438385,2.23679334990361,0.757261933331841,0.68014404096107,20.0006497204158,1.72084775396277,5.439770669662,0,0,1.79210754838934,0.983110940922263,0.340860645156116,0,0.35333957451034,2.81686839553361,1.28326477414318,5.09610479413291,0,0.216491041011214,0.253359865475099,0,1.94112595522402,0.776813650941515,0.742210695324124,0.693941307064543,0,0.230615497256059,0.753613202763113,1.29347577849275,0.502666365318702,1.48316980640624,7.37456720291549,1.76922110389975,0,0.441683036920787,1.45462575940567,0,2.04946557908083,2.09446706813455,0.255457055208591,2.03685711660064,1.19980546198682,0.889491589511453,0.748953197024114,0.457500602818626,0.502617408451458,1.21677024134594,1.27857728665165,0.62336413367868,0.811206315338788,1.01839363850316,0.870848794270651,1.26361379216837,0.420883711772948,1.43132487258974,0.689706313300419,1.26043490863744,1.20563854268572,2.10913147369116,1.7935920839879,1.12442069471675,2.58703370739016,0.646703978798527,0.756424320671277,0.351902248327898,0.43839146485515,0.556094498451196,1.0447564995665,0,1.39323986772945,1.40442637462647,0.772043721344145,0.568326998791185,1.65700618028402,1.40715635988658,1.80062061461015,1.42046841351126,2.36117078096885,2.1597395804233,2.55787339225449,3.21928081679543,3.61972561338225,4.44311594766397,3.94001913789829,4.78305976320549,5.4093995347373,6.80605357402257,5.63666958793561,0.841159794256509,0.617427674275707,0,0.793351699990633,0.639864751605702,0.696710015581316,1.15980715189884,0.403367049246685,0,0.570676878337677,0.474529061544512,0,0.754005626400808,0.795825888164603,0.58489226135736,0.898819408654221,0.216138049874694,0.199141273254367,0.189667900953082,1.14248512609729,2.25415471346161,0.610953983535943,1.16371492300575,1.47285221769669,1.20149420536089,1.91893192373483,1.09899109488962,1.1105744752962,1.1858105083486,0.333690211432188,0.589676985339609,0.674586337154561,1.01430060694251,1.20588579876208,0.50925170356284,0.863088412352432,2.59416362840057,2.19649130550465,1.43768206527355,3.34926852901653,2.18426371180192,4.04126204715379,1.25578189465339,1.92977408545347,2.95605104266567,0.37898282354097,0.977789858652155,0.509235257325564,0.469380496577004,1.50755631697634,0.952174563544055,4.48807390072937,2.83743259391144,2.43611158613652,1.43509291791738,3.27726629431476,1.38147985492716,2.89298117163023,0,0.54390568381871,0.491764273019036,0.827810238914197,0.481651769963376,1.05490517932983,0.163934945376675,1.26235463602186,0.315508219416257,3.51394869866975,1.72338718186239,0.477937595905104,1.78238939265915,1.98153571552183,0.809621403349789,1.75353514746787,2.37172666767914,0.963963949265421,1.13552068166615,0.178065603667255,0.488660878060728,0.824850614862677,1.32745138339963,0.485561272309963,0.302323556964751,0.754420319023592,0,0,1.55056975900933,1.45413491791002,0.712994756769443,0,1.05418608574999,1.03135543248187,0,1.08036656418786,0.129358683782755,0.857348140126369,0.886701168211368,0.713475270408282,2.13913726782757,0.913394847343798,0,0,0.661585194164886,0.32977250588296,1.13025098687134,0.482503399425247,1.07435109602823,0.328281799490123,0.874442509889552,0.927126510052548,0.854354403989263,0.82554747185289,0.185194527369712,0.941842285023455,0.136694227721025,0.228778173206523,0.849892149969277,1.95932033253121,1.79659965945751,0.954670618015114,0.632671987162271,0.609958401380546,0.432021363287205,0.418176592028937,0.436725127492355,0.539457385539283,1.23980183588004,0.785267825952089,0.518459893167171,0.621339313086926,12.9649375897364,0.448549638131936,1.15820943319968,0.194451188344048,0.258319646955462,0.168956125490778,1.87771581833206,1.8228613878153,2.9360616439199,8.69702834973622,9.79302021276743,0.316011120628178,0,0.205421914329655,0.389762468933385,0.179026695667481,0.198681354781265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| ||
|short_description=p3@Ralgapa2 | |short_description=p3@Ralgapa2 | ||
}} | }} |
Latest revision as of 20:44, 25 September 2015
Short description: | p3@Ralgapa2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ralgapa2_5end |
Coexpression cluster: | NA |
Association with transcript: | 24bp_to_ENSMUST00000109986, ENSMUST00000135974, NM_001033348, uc008msj.2, uc008msm.1, uc008msn.1_5end |
EntrezGene: | Ralgapa2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial tube | 6.67e-09 | 47 |
primary circulatory organ | 8.02e-08 | 18 |
heart | 8.02e-08 | 18 |
primitive heart tube | 8.02e-08 | 18 |
primary heart field | 8.02e-08 | 18 |
anterior lateral plate mesoderm | 8.02e-08 | 18 |
heart tube | 8.02e-08 | 18 |
heart primordium | 8.02e-08 | 18 |
cardiac mesoderm | 8.02e-08 | 18 |
cardiogenic plate | 8.02e-08 | 18 |
heart rudiment | 8.02e-08 | 18 |
compound organ | 2.50e-07 | 43 |
cardiovascular system | 2.77e-07 | 23 |
circulatory system | 2.77e-07 | 23 |
primordium | 3.70e-07 | 134 |