FFCP PHASE1:Mm9::chr19:46119684..46119712,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16825 | |EntrezGene=16825 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=D3Z1C5,P70662 | |UniProt=D3Z1C5,P70662 | ||
|association_with_transcript=0bp_to_ENSMUST00000152946,ENSMUST00000156585,NM_001113408,uc012bmr.1_5end | |association_with_transcript=0bp_to_ENSMUST00000152946,ENSMUST00000156585,NM_001113408,uc012bmr.1_5end | ||
|cluster_id=chr19:46119684..46119712,- | |||
|description=CAGE_peak_4_at_Ldb1_5end | |description=CAGE_peak_4_at_Ldb1_5end | ||
|id=chr19:46119684..46119712,- | |id=chr19:46119684..46119712,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!3.72e-09!23;UBERON:0001009!3.72e-09!23;UBERON:0007100!8.87e-08!18;UBERON:0000948!8.87e-08!18;UBERON:0005498!8.87e-08!18;UBERON:0004140!8.87e-08!18;UBERON:0009881!8.87e-08!18;UBERON:0004141!8.87e-08!18;UBERON:0003084!8.87e-08!18;UBERON:0007005!8.87e-08!18;UBERON:0004139!8.87e-08!18;UBERON:0004291!8.87e-08!18;UBERON:0003914!3.61e-07!47;UBERON:0004872!7.22e-07!33;UBERON:0005157!7.44e-07!27 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,3.61e-09,23;UBERON:0001009,3.61e-09,23;UBERON:0007100,8.65e-08,18;UBERON:0000948,8.65e-08,18;UBERON:0005498,8.65e-08,18;UBERON:0004140,8.65e-08,18;UBERON:0009881,8.65e-08,18;UBERON:0004141,8.65e-08,18;UBERON:0003084,8.65e-08,18;UBERON:0007005,8.65e-08,18;UBERON:0004139,8.65e-08,18;UBERON:0004291,8.65e-08,18;UBERON:0003914,3.53e-07,47;UBERON:0002100,4.09e-07,90;UBERON:0004872,7.06e-07,33;UBERON:0005157,9.15e-07,20 | |||
|phase1_expression=5.60520964866779,0.697950815278722,0.909998478779072,1.20985684522732,1.00179145989269,1.34303417529512,0.934450562382103,0.645616617207881,0.140788722151667,0,0.171217968225505,0,0,0,1.99865857089398,3.44207954562704,2.09868563438444,0.946386496074713,2.19383093769182,1.69755860719212,4.67738095830884,6.15603897445489,5.22399578277871,0.47997726838022,0.68822784320151,0,0,0.430942465371778,0.570070258369122,0.504060259519861,0,6.98533740805594,9.22597181376855,15.8481681015439,1.73310971850765,1.16364251750945,2.04169356262369,0.418531630736908,1.5626706890476,1.57057123192139,0.588231488031014,0,0.971020706062307,10.8271263458996,8.92116994731728,10.8292583775392,7.04152209913235,5.66865406589161,8.78744730937887,6.41618666945135,2.79972843250725,2.87505128729943,2.85230430298152,2.17608642603403,0.672187598284928,4.88792928468299,5.73066879877513,5.67239301505187,3.64169629547276,2.64495489636016,3.1691570175309,6.09920157724438,7.11435836888911,6.29929802096979,5.93319817540185,2.8419204597844,8.68840320503374,13.831858991576,3.11068836925433,2.8351247049655,2.73422449756797,3.42781181284564,1.98781686856452,2.32732518508413,4.12135525378416,4.5960939330501,1.10115880999389,4.08599481872601,3.37934373163736,2.1101806036831,3.38504281328916,4.68822033501084,2.79182999001381,0.56276261003168,3.66715794664344,2.65165726926301,2.27794689278565,1.86399445825301,7.57261933331841,6.04572480854284,4.34796733052517,4.30211938490693,1.3599426674155,5.39703191637817,1.94932925234301,6.2723764193627,2.94933282276679,6.30592193538814,6.49465011507172,8.83348936275851,6.05626705039726,8.98285341900225,5.09610479413291,0,1.08245520505607,1.01343946190039,2.02209778005913,2.51204535381932,2.07150306917737,6.53145411885229,3.64319186208885,3.04465478312141,5.99600292865752,4.82312449768392,5.40908052824242,4.39833069653864,3.21353458054686,3.90418263683761,2.65383165584962,2.42650274921114,2.42925670306433,3.39412677194655,1.86391761218122,2.34224637609238,2.51336048176146,3.57639877292028,0.718890747035522,1.19980546198682,1.77898317902291,3.59497534571574,3.20250421973039,1.63350657746724,1.56441888173049,1.02286182932132,2.49345653471472,2.75810147215188,4.9901288286655,2.61254638281195,2.77995034277042,3.36706969418358,8.97831056442656,6.66716102857071,6.84236093260327,5.57607825992146,5.44291993210623,5.25266253167884,4.8724896771059,2.58703370739016,10.1316956678436,7.94245536704841,4.04687585577082,3.28793598641362,3.33656699070717,5.57203466435466,4.7329891373827,5.17489093728082,1.40442637462647,0.772043721344145,1.42081749697796,7.66365358381357,7.50483391939508,6.66229627405755,8.99629995223799,11.215561209602,10.0273623376796,12.556833016522,8.58474884478781,10.0418194435766,8.22799249567402,6.56669856316381,8.83650024049827,5.99419948443863,5.26920276698522,5.09984391289413,2.3131894342054,1.85228302282712,0.991256348951394,0.793351699990633,6.39864751605702,5.80591679651096,2.19074684247559,2.42020229548011,1.55664630691409,2.09248188723815,0.474529061544512,1.97638745668813,2.01068167040216,4.97391180102877,4.28920991662064,2.69645822596266,2.37751854862164,3.58454291857861,6.2590407314517,5.1411830674378,2.25415471346161,6.31319116320474,3.49114476901726,6.59276706968994,6.9560190836683,7.23289725100051,3.61097074035162,6.91024117962083,4.15033677922008,3.83743743147016,4.52085688760367,4.27238013531222,2.84004169943904,3.61765739628625,5.34714288740982,7.19240343627027,7.7824908852017,3.29473695825698,4.31304619582064,5.95425516269605,2.80833905803104,3.78868316920668,4.84373016509163,4.82443521363367,8.68339993783042,5.87423376488503,5.86673915191293,6.11082308790677,4.45911471748154,5.02518772325447,7.85544014923845,13.4642217021881,5.04432461139811,5.3151525515706,8.77001227616179,9.83179888294428,5.52591941970866,9.25753974921674,3.01582567878545,1.63171705145613,5.90117127622843,5.24279817978992,2.88991061978026,2.93029216480508,2.62295912602681,2.27223834483936,6.31016438832513,7.80877488593277,7.10897212518236,11.2315335037699,10.6943363559549,7.35998980050964,9.31064613852257,9.05993159525067,7.11518000303742,3.53453448063988,6.38730383437209,6.05423052468668,7.32991317091092,6.43383479592888,6.63725691699814,4.37005145078967,3.02323556964751,3.39489143560617,4.42952839321159,4.30409207121498,6.71913562237375,7.99774204850512,5.34746067577082,4.74055136903724,2.10837217149998,6.18813259489121,11.234506989875,7.74262704334634,13.194585745841,9.00215547132688,9.3990323830405,5.70780216326626,9.05019613311665,7.61162372786498,1.40803024838226,2.1183207086382,5.73373834942901,5.93590510589328,2.58343082713449,5.06628569396509,8.8335534562321,8.042904087508,1.7488850197791,2.78137953015765,3.41741761595705,6.19160603889667,4.44466865687308,4.52084296811258,3.2806614653046,3.88922894451088,3.22959016988325,2.23922323717853,0.690999869022119,2.86401185404534,4.74503990371703,4.47302827679067,4.32021363287205,3.13632444021703,3.71216358368502,4.85511646985355,4.21532624199213,2.355803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| |phase1_expression=5.60520964866779,0.697950815278722,0.909998478779072,1.20985684522732,1.00179145989269,1.34303417529512,0.934450562382103,0.645616617207881,0.140788722151667,0,0.171217968225505,0,0,0,1.99865857089398,3.44207954562704,2.09868563438444,0.946386496074713,2.19383093769182,1.69755860719212,4.67738095830884,6.15603897445489,5.22399578277871,0.47997726838022,0.68822784320151,0,0,0.430942465371778,0.570070258369122,0.504060259519861,0,6.98533740805594,9.22597181376855,15.8481681015439,1.73310971850765,1.16364251750945,2.04169356262369,0.418531630736908,1.5626706890476,1.57057123192139,0.588231488031014,0,0.971020706062307,10.8271263458996,8.92116994731728,10.8292583775392,7.04152209913235,5.66865406589161,8.78744730937887,6.41618666945135,2.79972843250725,2.87505128729943,2.85230430298152,2.17608642603403,0.672187598284928,4.88792928468299,5.73066879877513,5.67239301505187,3.64169629547276,2.64495489636016,3.1691570175309,6.09920157724438,7.11435836888911,6.29929802096979,5.93319817540185,2.8419204597844,8.68840320503374,13.831858991576,3.11068836925433,2.8351247049655,2.73422449756797,3.42781181284564,1.98781686856452,2.32732518508413,4.12135525378416,4.5960939330501,1.10115880999389,4.08599481872601,3.37934373163736,2.1101806036831,3.38504281328916,4.68822033501084,2.79182999001381,0.56276261003168,3.66715794664344,2.65165726926301,2.27794689278565,1.86399445825301,7.57261933331841,6.04572480854284,4.34796733052517,4.30211938490693,1.3599426674155,5.39703191637817,1.94932925234301,6.2723764193627,2.94933282276679,6.30592193538814,6.49465011507172,8.83348936275851,6.05626705039726,8.98285341900225,5.09610479413291,0,1.08245520505607,1.01343946190039,2.02209778005913,2.51204535381932,2.07150306917737,6.53145411885229,3.64319186208885,3.04465478312141,5.99600292865752,4.82312449768392,5.40908052824242,4.39833069653864,3.21353458054686,3.90418263683761,2.65383165584962,2.42650274921114,2.42925670306433,3.39412677194655,1.86391761218122,2.34224637609238,2.51336048176146,3.57639877292028,0.718890747035522,1.19980546198682,1.77898317902291,3.59497534571574,3.20250421973039,1.63350657746724,1.56441888173049,1.02286182932132,2.49345653471472,2.75810147215188,4.9901288286655,2.61254638281195,2.77995034277042,3.36706969418358,8.97831056442656,6.66716102857071,6.84236093260327,5.57607825992146,5.44291993210623,5.25266253167884,4.8724896771059,2.58703370739016,10.1316956678436,7.94245536704841,4.04687585577082,3.28793598641362,3.33656699070717,5.57203466435466,4.7329891373827,5.17489093728082,1.40442637462647,0.772043721344145,1.42081749697796,7.66365358381357,7.50483391939508,6.66229627405755,8.99629995223799,11.215561209602,10.0273623376796,12.556833016522,8.58474884478781,10.0418194435766,8.22799249567402,6.56669856316381,8.83650024049827,5.99419948443863,5.26920276698522,5.09984391289413,2.3131894342054,1.85228302282712,0.991256348951394,0.793351699990633,6.39864751605702,5.80591679651096,2.19074684247559,2.42020229548011,1.55664630691409,2.09248188723815,0.474529061544512,1.97638745668813,2.01068167040216,4.97391180102877,4.28920991662064,2.69645822596266,2.37751854862164,3.58454291857861,6.2590407314517,5.1411830674378,2.25415471346161,6.31319116320474,3.49114476901726,6.59276706968994,6.9560190836683,7.23289725100051,3.61097074035162,6.91024117962083,4.15033677922008,3.83743743147016,4.52085688760367,4.27238013531222,2.84004169943904,3.61765739628625,5.34714288740982,7.19240343627027,7.7824908852017,3.29473695825698,4.31304619582064,5.95425516269605,2.80833905803104,3.78868316920668,4.84373016509163,4.82443521363367,8.68339993783042,5.87423376488503,5.86673915191293,6.11082308790677,4.45911471748154,5.02518772325447,7.85544014923845,13.4642217021881,5.04432461139811,5.3151525515706,8.77001227616179,9.83179888294428,5.52591941970866,9.25753974921674,3.01582567878545,1.63171705145613,5.90117127622843,5.24279817978992,2.88991061978026,2.93029216480508,2.62295912602681,2.27223834483936,6.31016438832513,7.80877488593277,7.10897212518236,11.2315335037699,10.6943363559549,7.35998980050964,9.31064613852257,9.05993159525067,7.11518000303742,3.53453448063988,6.38730383437209,6.05423052468668,7.32991317091092,6.43383479592888,6.63725691699814,4.37005145078967,3.02323556964751,3.39489143560617,4.42952839321159,4.30409207121498,6.71913562237375,7.99774204850512,5.34746067577082,4.74055136903724,2.10837217149998,6.18813259489121,11.234506989875,7.74262704334634,13.194585745841,9.00215547132688,9.3990323830405,5.70780216326626,9.05019613311665,7.61162372786498,1.40803024838226,2.1183207086382,5.73373834942901,5.93590510589328,2.58343082713449,5.06628569396509,8.8335534562321,8.042904087508,1.7488850197791,2.78137953015765,3.41741761595705,6.19160603889667,4.44466865687308,4.52084296811258,3.2806614653046,3.88922894451088,3.22959016988325,2.23922323717853,0.690999869022119,2.86401185404534,4.74503990371703,4.47302827679067,4.32021363287205,3.13632444021703,3.71216358368502,4.85511646985355,4.21532624199213,2.355803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| ||
|short_description=p4@Ldb1 | |short_description=p4@Ldb1 | ||
}} | }} |
Latest revision as of 20:51, 25 September 2015
Short description: | p4@Ldb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Ldb1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000152946, ENSMUST00000156585, NM_001113408, uc012bmr.1_5end |
EntrezGene: | Ldb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 3.61e-09 | 23 |
circulatory system | 3.61e-09 | 23 |
primary circulatory organ | 8.65e-08 | 18 |
heart | 8.65e-08 | 18 |
primitive heart tube | 8.65e-08 | 18 |
primary heart field | 8.65e-08 | 18 |
anterior lateral plate mesoderm | 8.65e-08 | 18 |
heart tube | 8.65e-08 | 18 |
heart primordium | 8.65e-08 | 18 |
cardiac mesoderm | 8.65e-08 | 18 |
cardiogenic plate | 8.65e-08 | 18 |
heart rudiment | 8.65e-08 | 18 |
epithelial tube | 3.53e-07 | 47 |
trunk | 4.09e-07 | 90 |
splanchnic layer of lateral plate mesoderm | 7.06e-07 | 33 |
epithelial fold | 9.15e-07 | 20 |