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FFCP PHASE1:Mm9::chr16:92400312..92400328,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=54720
|EntrezGene=54720
|HGNC=
|HGNC=
|MCL_coexpression_id=1642
|TSSclassifier=NA
|UniProt=Q9JHG6,Q542V6
|UniProt=Q9JHG6,Q542V6
|association_with_transcript=0bp_to_ENSMUST00000023672,NM_019466,uc007zzd.1_5end
|association_with_transcript=0bp_to_ENSMUST00000023672,NM_019466,uc007zzd.1_5end
|cluster_id=chr16:92400312..92400328,-
|description=CAGE_peak_1_at_Rcan1_5end
|description=CAGE_peak_1_at_Rcan1_5end
|id=chr16:92400312..92400328,-
|id=chr16:92400312..92400328,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001048!1.81e-07!147
|ontology_enrichment_uberon_v019_2=UBERON:0001048,3.30e-09,134;UBERON:0004119,4.98e-08,118;UBERON:0000925,4.98e-08,118;UBERON:0006595,4.98e-08,118;UBERON:0001007,1.36e-07,116;UBERON:0001555,1.36e-07,116;UBERON:0007026,1.36e-07,116;UBERON:0004921,7.60e-07,114
|phase1_expression=8.16759120234449,211.828072437092,173.809709446803,26.9193148063079,30.5546395267272,37.2691983644395,40.882212104217,0.258246646883153,4.36445038670167,3.5109678948299,0.171217968225505,0.0797721589953364,0,0,2.99798785634096,2.02475267389826,0.699561878128147,0.630924330716475,0.685572168028694,3.81950686618227,21.1757792476164,0.0992909512008853,0,129.913847308246,122.275146808802,170.546893342161,159.812700575017,132.514808101822,35.3443560188855,25.7070732355129,26.3859307679813,0,0,0,1.1554064790051,1.32987716286794,1.83752420636132,0,0,0,0.588231488031014,0,0.485510353031154,1.51076181570693,0.912392380975631,0.183546752161682,1.56478268869608,63.8813708194708,74.4736159469859,89.8266133723189,13.9986421625363,27.3129872293446,0.503347818173209,0,0.336093799142464,2.57259436035947,6.5902691185914,4.64104883049698,2.42779753031517,3.1739458756322,6.33831403506179,2.71075625655306,2.66788438833342,40.0455374190223,51.4210508534827,42.628806896766,82.9892306135981,131.786878725293,1.8664130215526,1.62007125998029,1.26194976810829,7.14127461009509,4.19650227808066,1.83736198822431,1.62937300731002,0.919218786610021,4.40463523997555,3.06449611404451,3.5329502648936,3.56092976871523,2.19570344645783,3.64639359389732,5.02529398202486,3.37657566019008,1.37518422999129,4.71405736757868,5.12538050876771,2.60959224155421,29.9875725599409,48.2146553481292,184.063950325565,71.4151817894551,758.84800841785,18.3499085156858,63.6780889098716,20.6092368064774,74.8568759302237,0.340860645156116,0.779358013808606,0,15.0702459161048,16.6824420638613,12.7402619853323,14.2213340630666,13.8554266247177,13.4280728701802,12.1325866803548,63.7146048832355,14.2415836005944,7.71899123137089,2.94925055502431,4.56698217468212,7.61031140944993,5.87818298155228,11.2885158850277,1.88499886994513,101.349936771093,11.2787498397531,30.9613693182456,37.2063754879041,45.0516697659203,51.3967768323335,3.72783522436244,2.34224637609238,2.09446706813455,16.3492515333498,0.599075622529601,1.19980546198682,0.508280908292259,4.34392854273986,3.20250421973039,1.63350657746724,1.39059456153821,1.79000820131231,2.90903262383384,2.43361894601636,6.41587992256993,25.5034289750691,11.8779696463827,11.7847439296425,15.4843327125617,12.4147136394075,14.0448461248172,7.9873553452929,9.66118287948856,6.91814089538189,7.68354141389776,16.557015727297,4.74249584452253,7.37513712654495,8.62160508403349,12.9325482132269,13.6243152120543,24.0293994900295,40.3332987359569,24.6802490854932,0,0.51469581422943,0.284163499395593,111.640791396636,129.927437229527,138.46772526352,132.340307192133,107.039742070588,79.2932960241124,79.9916769941403,80.7502938212854,57.6820791293817,55.6212292707564,75.0245310841465,31.6168357228837,37.1347968060344,77.940290928323,22.1440590954613,2.3131894342054,2.57261530948211,23.7901523748335,23.5361004330554,9.59797127408553,9.98617688999886,11.7269389803105,16.7397325437374,27.5748774367639,54.5947546943045,39.3859121081945,87.9492418226218,83.94595973929,79.184675872378,82.0798806771496,31.4586793028978,11.0230405436094,21.3081162382173,9.67306294860717,9.71112357182695,20.2873924211545,25.4564159806643,33.165875305664,40.6086397164944,45.972962489335,55.7966359362896,55.2635522001639,38.37651797968,172.535428964721,9.34332592010127,4.91397487783007,4.49724224769707,7.70868461276311,9.88826354984909,9.93040821947537,18.9879450717535,17.0241988113787,11.2570179407113,58.9449646762154,25.3055844414582,13.4176199439261,12.1237861414614,40.1850206289083,13.0259750768109,30.4842763774898,14.9698215298683,27.2151510658183,24.4432923516271,37.5504397261603,82.9155974336988,85.4576670780789,39.2218632194176,104.985005974723,114.497244548417,129.47727214988,39.3271955317771,53.1869744146958,20.2508682014116,3.01582567878545,4.89515115436839,0.983528546038072,1.93155722413313,8.50918126935297,9.02529986759964,0.491804836130026,50.9991272952833,0.315508219416257,0,0.215423397732799,2.38968797952552,7.12955757063661,10.4738316391868,1.21443210502468,2.63030272120181,2.37172666767914,2.89189184779626,8.51640511249612,3.5613120733451,4.39794790254655,3.62934270539578,1.32745138339963,9.46844481004428,5.44182402536552,4.52652191414155,7.67784921490009,4.30409207121498,45.2249513044387,5.81653967164009,9.26893183800275,5.68866164284469,5.27093042874994,4.12542172992747,10.5536277783674,7.56256594931503,4.65691261617916,3.64372959553707,4.43350584105684,8.02659679209317,6.08831376227848,9.43841342255258,20.6511103096065,51.6870252907721,1.98475558249466,49.1361033765611,10.6566521619298,29.6136461397245,36.2891925769535,62.5376828028683,50.4261847369642,15.0194494628513,24.4345359540929,41.8965341965342,36.4833218918332,14.6927396463659,15.1730592770338,10.7525741407066,11.3885548095883,8.11718423477216,6.08079884739465,15.2747298882418,7.59206384594725,6.70954241518601,5.61627772273367,7.3180903605064,10.9181281873089,10.2496903252464,16.7786515122432,8.37619014348895,4.53652406521275,25.474911836564,21.4203316699992,68.1795449960543,48.4793377039296,69.8079766155131,69.8754645014525,87.1813607532415,66.4241970734967,31.7698699019238,12.8976993643624,14.9782154912124,18.4339204005034,22.7528006852288,5.87903124341476,5.6491026440655,7.40548690973432,8.77230808770659,13.3116507703447,15.505212988076,17.2796746794255,13.7314371929481,13.488604777935,13.6115349934735,12.9618981383871,11.2567854719185,11.8045671203385,37.6372436801251,23.3085251042768,45.2157837311758,40.2923079273788,17.5802530569293,25.7124991368119,9.34073283763052,11.5758924702696,1.00314420807073,1.6942555278512,1.38097570952153,2.86447756719698,2.23409137046794,1.37016503954128,2.2661816921691,4.05013500139084,2.2516060161211,4.98456649882625,3.62432218226274,11.9355449721803,4.78829848081237,8.70741389346084,14.1001895899611,9.85181864351517,14.1559501506511,17.5574914963276,14.0103838922448,8.66481865897901,14.6564382823003,10.6461305953901,15.8446126764304,12.4543204934944,11.7166028900911,11.8891420738119,20.4806287251722,12.6313915279892,10.8029163459675,7.82963211526283,12.3647092912894,12.6861623382604,15.9728225543404,11.921809497366,14.9706809131298,12.798875736485,13.2844934389932,15.1830217484401,16.3103221091463,13.5804113845862,11.2228454331548,11.8635018124174,12.8055827088233,11.4584692087513,15.3387472774106,18.5190346541896,11.4912865851455,24.0949556698771,30.5116896748584,24.1023298406743,39.7064554415128,42.1999460829167
|phase1_expression=8.16759120234449,211.828072437092,173.809709446803,26.9193148063079,30.5546395267272,37.2691983644395,40.882212104217,0.258246646883153,4.36445038670167,3.5109678948299,0.171217968225505,0.0797721589953364,0,0,2.99798785634096,2.02475267389826,0.699561878128147,0.630924330716475,0.685572168028694,3.81950686618227,21.1757792476164,0.0992909512008853,0,129.913847308246,122.275146808802,170.546893342161,159.812700575017,132.514808101822,35.3443560188855,25.7070732355129,26.3859307679813,0,0,0,1.1554064790051,1.32987716286794,1.83752420636132,0,0,0,0.588231488031014,0,0.485510353031154,1.51076181570693,0.912392380975631,0.183546752161682,1.56478268869608,63.8813708194708,74.4736159469859,89.8266133723189,13.9986421625363,27.3129872293446,0.503347818173209,0,0.336093799142464,2.57259436035947,6.5902691185914,4.64104883049698,2.42779753031517,3.1739458756322,6.33831403506179,2.71075625655306,2.66788438833342,40.0455374190223,51.4210508534827,42.628806896766,82.9892306135981,131.786878725293,1.8664130215526,1.62007125998029,1.26194976810829,7.14127461009509,4.19650227808066,1.83736198822431,1.62937300731002,0.919218786610021,4.40463523997555,3.06449611404451,3.5329502648936,3.56092976871523,2.19570344645783,3.64639359389732,5.02529398202486,3.37657566019008,1.37518422999129,4.71405736757868,5.12538050876771,2.60959224155421,29.9875725599409,48.2146553481292,184.063950325565,71.4151817894551,758.84800841785,18.3499085156858,63.6780889098716,20.6092368064774,74.8568759302237,0.340860645156116,0.779358013808606,0,15.0702459161048,16.6824420638613,12.7402619853323,14.2213340630666,13.8554266247177,13.4280728701802,12.1325866803548,63.7146048832355,14.2415836005944,7.71899123137089,2.94925055502431,4.56698217468212,7.61031140944993,5.87818298155228,11.2885158850277,1.88499886994513,101.349936771093,11.2787498397531,30.9613693182456,37.2063754879041,45.0516697659203,51.3967768323335,3.72783522436244,2.34224637609238,2.09446706813455,16.3492515333498,0.599075622529601,1.19980546198682,0.508280908292259,4.34392854273986,3.20250421973039,1.63350657746724,1.39059456153821,1.79000820131231,2.90903262383384,2.43361894601636,6.41587992256993,25.5034289750691,11.8779696463827,11.7847439296425,15.4843327125617,12.4147136394075,14.0448461248172,7.9873553452929,9.66118287948856,6.91814089538189,7.68354141389776,16.557015727297,4.74249584452253,7.37513712654495,8.62160508403349,12.9325482132269,13.6243152120543,24.0293994900295,40.3332987359569,24.6802490854932,0,0.51469581422943,0.284163499395593,111.640791396636,129.927437229527,138.46772526352,132.340307192133,107.039742070588,79.2932960241124,79.9916769941403,80.7502938212854,57.6820791293817,55.6212292707564,75.0245310841465,31.6168357228837,37.1347968060344,77.940290928323,22.1440590954613,2.3131894342054,2.57261530948211,23.7901523748335,23.5361004330554,9.59797127408553,9.98617688999886,11.7269389803105,16.7397325437374,27.5748774367639,54.5947546943045,39.3859121081945,87.9492418226218,83.94595973929,79.184675872378,82.0798806771496,31.4586793028978,11.0230405436094,21.3081162382173,9.67306294860717,9.71112357182695,20.2873924211545,25.4564159806643,33.165875305664,40.6086397164944,45.972962489335,55.7966359362896,55.2635522001639,38.37651797968,172.535428964721,9.34332592010127,4.91397487783007,4.49724224769707,7.70868461276311,9.88826354984909,9.93040821947537,18.9879450717535,17.0241988113787,11.2570179407113,58.9449646762154,25.3055844414582,13.4176199439261,12.1237861414614,40.1850206289083,13.0259750768109,30.4842763774898,14.9698215298683,27.2151510658183,24.4432923516271,37.5504397261603,82.9155974336988,85.4576670780789,39.2218632194176,104.985005974723,114.497244548417,129.47727214988,39.3271955317771,53.1869744146958,20.2508682014116,3.01582567878545,4.89515115436839,0.983528546038072,1.93155722413313,8.50918126935297,9.02529986759964,0.491804836130026,50.9991272952833,0.315508219416257,0,0.215423397732799,2.38968797952552,7.12955757063661,10.4738316391868,1.21443210502468,2.63030272120181,2.37172666767914,2.89189184779626,8.51640511249612,3.5613120733451,4.39794790254655,3.62934270539578,1.32745138339963,9.46844481004428,5.44182402536552,4.52652191414155,7.67784921490009,4.30409207121498,45.2249513044387,5.81653967164009,9.26893183800275,5.68866164284469,5.27093042874994,4.12542172992747,10.5536277783674,7.56256594931503,4.65691261617916,3.64372959553707,4.43350584105684,8.02659679209317,6.08831376227848,9.43841342255258,20.6511103096065,51.6870252907721,1.98475558249466,49.1361033765611,10.6566521619298,29.6136461397245,36.2891925769535,62.5376828028683,50.4261847369642,15.0194494628513,24.4345359540929,41.8965341965342,36.4833218918332,14.6927396463659,15.1730592770338,10.7525741407066,11.3885548095883,8.11718423477216,6.08079884739465,15.2747298882418,7.59206384594725,6.70954241518601,5.61627772273367,7.3180903605064,10.9181281873089,10.2496903252464,16.7786515122432,8.37619014348895,4.53652406521275,25.474911836564,21.4203316699992,68.1795449960543,48.4793377039296,69.8079766155131,69.8754645014525,87.1813607532415,66.4241970734967,31.7698699019238,12.8976993643624,14.9782154912124,18.4339204005034,22.7528006852288,5.87903124341476,5.6491026440655,7.40548690973432,8.77230808770659,13.3116507703447,15.505212988076,17.2796746794255,13.7314371929481,13.488604777935,13.6115349934735,12.9618981383871,11.2567854719185,11.8045671203385,37.6372436801251,23.3085251042768,45.2157837311758,40.2923079273788,17.5802530569293,25.7124991368119,9.34073283763052,11.5758924702696,1.00314420807073,1.6942555278512,1.38097570952153,2.86447756719698,2.23409137046794,1.37016503954128,2.2661816921691,4.05013500139084,2.2516060161211,4.98456649882625,3.62432218226274,11.9355449721803,4.78829848081237,8.70741389346084,14.1001895899611,9.85181864351517,14.1559501506511,17.5574914963276,14.0103838922448,8.66481865897901,14.6564382823003,10.6461305953901,15.8446126764304,12.4543204934944,11.7166028900911,11.8891420738119,20.4806287251722,12.6313915279892,10.8029163459675,7.82963211526283,12.3647092912894,12.6861623382604,15.9728225543404,11.921809497366,14.9706809131298,12.798875736485,13.2844934389932,15.1830217484401,16.3103221091463,13.5804113845862,11.2228454331548,11.8635018124174,12.8055827088233,11.4584692087513,15.3387472774106,18.5190346541896,11.4912865851455,24.0949556698771,30.5116896748584,24.1023298406743,39.7064554415128,42.1999460829167
|short_description=p1@Rcan1
|short_description=p1@Rcan1
}}
}}

Latest revision as of 20:57, 25 September 2015

Short description:p1@Rcan1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Rcan1_5end
Coexpression cluster:MCL_coexpression_mm9:1642
Association with transcript: 0bp_to_ENSMUST00000023672, NM_019466, uc007zzd.1_5end
EntrezGene:Rcan1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Rcan1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G78.17
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I5211.83
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I6173.81
CD326+ enterocyte, pool1.CNhs13542.11848-124I326.92
CD326+ enterocyte, pool2.CNhs13197.11849-124I430.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I737.27
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I840.88
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A32.02
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.63
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.69
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A321.18
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D1129.91
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D2122.28
GP2+ M cell, pool1.CNhs13228.11845-124H9170.55
GP2+ M cell, pool2.CNhs13231.11846-124I1159.81
GP2+ M cell, pool3.CNhs13240.11847-124I2132.51
Ileum epithelium, pool1.CNhs13199.10252-104B935.34
Ileum epithelium, pool2.CNhs13232.10253-104C125.71
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C826.39
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.84
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.51
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.91
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C263.88
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B874.47
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C389.83
Mouse Astrocytes, donor2.CNhs12078.11552-120C414.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C427.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.50
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.57
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E16.59
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C32.43
Mouse Granule cells, donor2.CNhs12357.11731-123E33.17
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.71
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C740.05
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E751.42
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D242.63
Mouse Microglia, donor1.CNhs12629.11718-123C882.99
Mouse Microglia, donor2.CNhs12634.11736-123E8131.79
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.87
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.20
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D34.40
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.06
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D43.56
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.20
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.61
Mouse Schwann, donor1.CNhs12507.11728-123D929.99
Mouse Schwann, donor2.CNhs12573.11746-123F948.21
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3184.06
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F771.42
Mouse hepatocyte, donor1.CNhs13078.11714-123C4758.85
Mouse hepatocyte, donor3.CNhs12615.11637-122C818.35
Mouse hepatocyte, donor6.CNhs13090.11822-124F463.68
Mouse hepatocyte, donor8.CNhs13091.11824-124F620.61
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A774.86
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.78
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G615.07
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H116.68
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I812.74
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G113.86
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G213.43
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G312.13
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B663.71
accessory axillary lymph node, adult.CNhs10475.1063-29H914.24
adrenal gland, adult.CNhs10508.49-24D77.72
adrenal gland, embryo E14.CNhs11038.406-44C52.95
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I17.61
adrenal gland, embryo E18.CNhs11026.1262-18F55.88
adrenal gland, neonate N00.CNhs11191.1311-23C111.29
adrenal gland, neonate N25.CNhs11223.1377-27I31.88
amnion, adult pregnant day17.5.CNhs10488.583-22A8101.35
aorta, adult.CNhs10498.46-23H111.28
bone (os femoris), adult.CNhs10483.56-12G230.96
bone (os femoris), neonate N02.CNhs11227.1985-43F537.21
bone (os femoris), neonate N16.CNhs11225.1525-43A645.05
bone (os femoris), neonate N20.CNhs11195.1350-25C351.40
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I22.09
colon, adult.CNhs10468.36-18H716.35
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.60
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A44.34
corpus striatum, adult.CNhs10487.19-21D83.20
corpus striatum, neonate N00.CNhs11226.630-43F11.63
cortex, adult.CNhs10473.12-14D51.39
cortex, neonate N30.CNhs11107.1392-42F21.79
diencephalon, adult.CNhs10482.20-12F22.91
diencephalon, neonate N30.CNhs11201.1388-42B22.43
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B16.42
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A225.50
epididymis, adult.CNhs10490.58-23B211.88
eyeball, adult.CNhs10484.31-12G411.78
eyeball, embryo E12.CNhs11016.345-16C615.48
eyeball, embryo E14.CNhs10521.399-16E212.41
eyeball, embryo E15.CNhs10593.426-16C914.04
eyeball, embryo E17.CNhs11023.1261-18D47.99
eyeball, neonate N00.CNhs11207.633-15C69.66
eyeball, neonate N01.CNhs11140.1532-43E76.92
eyeball, neonate N02.CNhs11205.1551-44G87.68
eyeball, neonate N16.CNhs11188.777-19A216.56
forelimb, embryo E11.CNhs10596.335-25E24.74
forelimb, embryo E12.CNhs10600.359-14H27.38
forelimb, embryo E13.CNhs10589.384-1E28.62
forelimb, embryo E14.CNhs10577.413-26A812.93
forelimb, embryo E15.CNhs11007.437-20E713.62
forelimb, embryo E17.CNhs10598.1517-43C424.03
forelimb, embryo E18.CNhs11008.1520-43B540.33
gonad, embryo E13.CNhs11044.1564-45I624.68
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.51
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E9111.64
heart, embryo E12.CNhs11015.353-12F5129.93
heart, embryo E13.CNhs11013.376-3I9138.47
heart, embryo E14.CNhs10597.403-26D4132.34
heart, embryo E15.CNhs11017.431-16C8107.04
heart, embryo E16.CNhs11021.457-17C679.29
heart, embryo E17.CNhs11025.479-18E579.99
heart, embryo E18.CNhs11030.1283-20G380.75
heart, neonate N00.CNhs11213.639-21E357.68
heart, neonate N03.CNhs11221.1349-25I255.62
heart, neonate N10.CNhs11118.749-24G175.02
heart, neonate N16.CNhs11209.782-15G131.62
heart, neonate N20.CNhs11127.821-26I637.13
heart, neonate N25.CNhs11196.1351-25D377.94
heart, neonate N30.CNhs11202.1390-42D222.14
hippocampus, adult.CNhs10478.13-16E82.31
hippocampus, neonate N00.CNhs11228.627-43G12.57
intestinal mucosa, adult.CNhs10506.860-29I323.79
intestine, adult.CNhs10496.178-9A323.54
intestine, embryo E12.CNhs11019.1251-16I59.60
intestine, embryo E13.CNhs11010.381-16D59.99
intestine, embryo E15.CNhs10602.976-16D811.73
intestine, embryo E16.CNhs10585.463-22H416.74
intestine, embryo E17.CNhs10582.482-18D327.57
intestine, embryo E18.CNhs10526.1289-20F754.59
intestine, neonate N00.CNhs11126.644-26D139.39
intestine, neonate N01.CNhs11192.1322-23E987.95
intestine, neonate N06.CNhs11102.688-20B883.95
intestine, neonate N07.CNhs11095.720-20F279.18
intestine, neonate N10.CNhs11098.755-23A582.08
intestine, neonate N20.CNhs11187.827-18D131.46
intestine, neonate N25.CNhs11121.1352-25E311.02
intestine, neonate N30.CNhs11131.1384-42G121.31
kidney, embryo E14.CNhs10606.411-4I99.67
kidney, embryo E15.CNhs10997.434-16F89.71
kidney, embryo E16.CNhs10584.464-22A520.29
kidney, embryo E17.CNhs11028.483-18I225.46
kidney, embryo E18.CNhs11001.1288-20C733.17
kidney, neonate N00.CNhs11214.646-21G740.61
kidney, neonate N10.CNhs11206.758-6D545.97
kidney, neonate N20.CNhs11113.832-19I155.80
kidney, neonate N25.CNhs11122.1353-25F355.26
kidney, neonate N30.CNhs11203.1385-42H138.38
liver, adult pregnant day01.CNhs10466.508-5B2172.54
liver, embryo E12.CNhs10601.355-15F89.34
liver, embryo E13.CNhs10524.378-3H64.91
liver, embryo E14.CNhs10594.409-16E14.50
liver, embryo E15.CNhs10520.433-16D77.71
liver, embryo E16.CNhs10523.462-17F59.89
liver, embryo E17.CNhs10510.481-18A39.93
liver, embryo E18.CNhs10579.499-43G418.99
liver, neonate N00.CNhs11117.641-24F417.02
liver, neonate N03.CNhs11123.1345-25G211.26
liver, neonate N06.CNhs11101.684-20A858.94
liver, neonate N07.CNhs11103.716-20H225.31
liver, neonate N10.CNhs11115.751-24B913.42
liver, neonate N20.CNhs11220.823-25A312.12
liver, neonate N25.CNhs11198.1368-26H140.19
liver, neonate N30.CNhs11106.1382-42D113.03
lung, adult.CNhs10474.28-22B130.48
lung, embryo E12.CNhs10522.354-16G214.97
lung, embryo E14.CNhs10604.404-26F827.22
lung, embryo E15.CNhs11020.432-17C524.44
lung, embryo E16.CNhs10998.458-17B637.55
lung, embryo E17.CNhs10605.480-44A682.92
lung, embryo E18.CNhs10583.1287-20I685.46
lung, neonate N00.CNhs11224.640-42C639.22
lung, neonate N06.CNhs11212.683-20E5104.99
lung, neonate N07.CNhs11111.715-19A3114.50
lung, neonate N10.CNhs11219.750-23E6129.48
lung, neonate N20.CNhs11109.822-18A439.33
lung, neonate N25.CNhs11119.1359-25C753.19
lung, neonate N30.CNhs11133.1394-42H220.25
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.93
medulla oblongata, adult.CNhs10477.17-12C28.51
medulla oblongata, neonate N30.CNhs11200.1396-42A39.03
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.49
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C251.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D87.13
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D910.47
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.21
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.63
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D62.37
olfactory brain, adult.CNhs10489.18-22I92.89
ovary, adult.CNhs10507.91-2I78.52
ovary, embryo E18.CNhs11040.505-44H73.56
ovary, neonate N00.CNhs11217.1299-22I44.40
oviduct, adult pregnant day01.CNhs10500.988-6G63.63
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F49.47
pancreas, embryo E15.CNhs11042.1556-45F25.44
pancreas, embryo E16.CNhs11003.460-26E54.53
pancreas, embryo E17.CNhs10599.1558-45G37.68
pancreas, embryo E18.CNhs10580.1535-43I74.30
pancreas, neonate N00.CNhs11105.645-26G945.22
pancreas, neonate N01.CNhs11138.1531-43D75.82
pancreas, neonate N02.CNhs11139.1539-43D89.27
pancreas, neonate N16.CNhs11136.787-43B65.69
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H54.13
pituitary gland, adult.CNhs10493.21-1G810.55
pituitary gland, embryo E12.CNhs11018.346-16E67.56
pituitary gland, embryo E13.CNhs11009.370-44C74.66
pituitary gland, embryo E14.CNhs11037.398-44A53.64
pituitary gland, embryo E15.CNhs10592.427-16B94.43
pituitary gland, embryo E16.CNhs11036.449-43F68.03
pituitary gland, embryo E17.CNhs11039.1265-44F56.09
pituitary gland, neonate N00.CNhs11190.1308-22E99.44
placenta, adult pregnant day10.CNhs10472.539-13I720.65
placenta, adult pregnant day17.CNhs10464.577-18G351.69
prostate, adult.CNhs10470.859-1F81.98
skin, adult.CNhs10492.30-1C349.14
skin, neonate N00.CNhs11124.650-25G410.66
skin, neonate N03.CNhs11215.662-22H329.61
skin, neonate N06.CNhs11097.693-20I536.29
skin, neonate N10.CNhs11108.762-6C462.54
small intestine, neonate N16.CNhs11114.790-21I150.43
spinal cord, adult.CNhs10505.24-13C915.02
spleen, adult.CNhs10465.25-2G224.43
spleen, embryo E16.CNhs11035.461-43C141.90
spleen, embryo E18.CNhs11011.1271-21F236.48
spleen, neonate N10.CNhs11116.752-24D114.69
spleen, neonate N20.CNhs11112.824-19H115.17
spleen, neonate N25.CNhs11099.1354-25G310.75
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C611.39
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.12
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D36.08
stomach, adult.CNhs10503.33-1H615.27
stomach, embryo E12.CNhs10588.356-43E37.59
stomach, embryo E15.CNhs10603.1252-16G86.71
stomach, embryo E16.CNhs11022.459-17D45.62
stomach, embryo E17.CNhs11006.1035-18D57.32
stomach, embryo E18.CNhs10999.1286-20C610.92
stomach, neonate N03.CNhs11193.1340-24B810.25
stomach, neonate N07.CNhs11210.718-18A916.78
stomach, neonate N25.CNhs11104.1355-25E48.38
stomach, neonate N30.CNhs11134.1386-42I14.54
submandibular gland, adult.CNhs10469.59-29C125.47
testis, adult.CNhs10504.57-7G521.42
testis, embryo E13.CNhs11031.389-23F568.18
testis, embryo E15.CNhs11034.443-27C548.48
testis, embryo E16.CNhs11033.470-26G569.81
testis, embryo E17.CNhs11029.486-18I569.88
testis, embryo E18.CNhs11027.503-18G587.18
testis, neonate N00.CNhs11189.1300-22B766.42
testis, neonate N07.CNhs11222.726-26I431.77
testis, neonate N10.CNhs11204.763-44D912.90
testis, neonate N20.CNhs11110.839-18H314.98
testis, neonate N30.CNhs11130.1391-42E218.43
thymus, adult.CNhs10471.38-12B522.75
thymus, embryo E14.CNhs11041.402-44I45.88
thymus, embryo E15.CNhs11005.430-45I25.65
thymus, embryo E16.CNhs11002.456-26C57.41
thymus, embryo E17.CNhs10581.478-18C18.77
thymus, embryo E18.CNhs10595.1273-19G413.31
thymus, neonate N02.CNhs11181.1541-43F815.51
thymus, neonate N03.CNhs11137.2104-43C717.28
thymus, neonate N06.CNhs11197.681-26C413.73
thymus, neonate N07.CNhs11211.713-19D313.49
thymus, neonate N10.CNhs11194.748-24E413.61
thymus, neonate N20.CNhs11186.820-7A212.96
thymus, neonate N25.CNhs11125.1362-25G711.26
thymus, neonate N30.CNhs11132.1393-42G211.80
tongue, adult.CNhs10499.32-1B437.64
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H323.31
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F745.22
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G540.29
urinary bladder, adult.CNhs10481.879-12E417.58
uterus, adult pregnant day19.CNhs10497.590-15F525.71
uterus, adult.CNhs10509.92-27E59.34
vagina, adult.CNhs10502.89-27D511.58
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.38
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.23
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A52.27
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.05
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A72.25
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.98
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A93.62
whole body, embryo E11.CNhs11014.324-5I811.94
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H28.71
whole body, embryo E14.5.CNhs10578.420-27D214.10
whole body, embryo E14.CNhs10519.395-14B19.85
whole body, embryo E16.CNhs10514.453-14F214.16
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G517.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.01
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G58.66
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G514.66
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.65
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G515.84
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G512.45
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.72
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.89
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G520.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G512.63
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.80
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G57.83
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G515.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G514.97
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G512.80
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G513.28
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G515.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G516.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G511.22
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G511.86
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G512.81
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G511.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.34
whole body, embryo E17.5.CNhs10513.490-9F918.52
whole body, embryo E17.CNhs10517.475-3I511.49
whole body, embryo E18.CNhs10516.493-3B324.09
whole body, neonate N00.CNhs10525.657-19C230.51
whole body, neonate N01.CNhs10576.659-23C624.10
whole body, neonate N06.CNhs10515.692-21D139.71
whole body, neonate N10.CNhs10518.761-6B442.20





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
primordium3.30e-09134
endoderm-derived structure4.98e-08118
endoderm4.98e-08118
presumptive endoderm4.98e-08118
digestive system1.36e-07116
digestive tract1.36e-07116
primitive gut1.36e-07116
subdivision of digestive tract7.60e-07114
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