FFCP PHASE1:Mm9::chr10:20880629..20880683,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=17863 | |EntrezGene=17863 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=759 | |MCL_coexpression_id=759 | ||
|TSSclassifier=NA | |||
|UniProt=E9Q4W1,P06876,F6TDP3,Q3UUX5,Q8BU17 | |UniProt=E9Q4W1,P06876,F6TDP3,Q3UUX5,Q8BU17 | ||
|association_with_transcript=106bp_to_ENSMUST00000020156,ENSMUST00000020158,ENSMUST00000169315,NM_001198914,NM_010848,uc007eog.1,uc007eoh.1,uc007eoi.1_5end | |association_with_transcript=106bp_to_ENSMUST00000020156,ENSMUST00000020158,ENSMUST00000169315,NM_001198914,NM_010848,uc007eog.1,uc007eoh.1,uc007eoi.1_5end | ||
|cluster_id=chr10:20880629..20880683,- | |||
|description=CAGE_peak_1_at_Myb_5end | |description=CAGE_peak_1_at_Myb_5end | ||
|id=chr10:20880629..20880683,- | |id=chr10:20880629..20880683,- | ||
|ontology_enrichment_celltype=CL:0000988!6.73e-07!32;CL:0002032!6.73e-07!32;CL:0000037!6.73e-07!32;CL:0000566!6.73e-07!32;CL:0000837!6.73e-07!32 | |ontology_enrichment_celltype=CL:0000988!6.73e-07!32;CL:0002032!6.73e-07!32;CL:0000037!6.73e-07!32;CL:0000566!6.73e-07!32;CL:0000837!6.73e-07!32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000988,2.14e-07,32;CL:0002032,2.14e-07,32;CL:0000037,2.14e-07,32;CL:0000837,2.14e-07,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001007!1.26e-10!128;UBERON:0001555!1.26e-10!128;UBERON:0007026!1.26e-10!128;UBERON:0004119!2.17e-10!130;UBERON:0000925!2.17e-10!130;UBERON:0006595!2.17e-10!130;UBERON:0004921!6.18e-10!126;UBERON:0004185!6.18e-10!126;UBERON:0004177!2.10e-09!29;UBERON:0002193!2.30e-09!48;UBERON:0002390!2.26e-08!45;UBERON:0003061!2.26e-08!45;UBERON:0005409!5.65e-08!59;UBERON:0002370!1.60e-07!23;UBERON:0000974!1.60e-07!23;UBERON:0004807!1.60e-07!23;UBERON:0005058!1.60e-07!23;UBERON:0003351!1.60e-07!23;UBERON:0009113!1.60e-07!23;UBERON:0003295!1.60e-07!23;UBERON:0009722!1.60e-07!23;UBERON:0005562!1.60e-07!23;UBERON:0007690!1.60e-07!23;UBERON:0006562!2.63e-07!24;UBERON:0001557!2.63e-07!24;UBERON:0001042!2.63e-07!24;UBERON:0008814!2.63e-07!24;UBERON:0009145!2.63e-07!24;UBERON:0000160!8.66e-07!43 | |ontology_enrichment_uberon=UBERON:0001007!1.26e-10!128;UBERON:0001555!1.26e-10!128;UBERON:0007026!1.26e-10!128;UBERON:0004119!2.17e-10!130;UBERON:0000925!2.17e-10!130;UBERON:0006595!2.17e-10!130;UBERON:0004921!6.18e-10!126;UBERON:0004185!6.18e-10!126;UBERON:0004177!2.10e-09!29;UBERON:0002193!2.30e-09!48;UBERON:0002390!2.26e-08!45;UBERON:0003061!2.26e-08!45;UBERON:0005409!5.65e-08!59;UBERON:0002370!1.60e-07!23;UBERON:0000974!1.60e-07!23;UBERON:0004807!1.60e-07!23;UBERON:0005058!1.60e-07!23;UBERON:0003351!1.60e-07!23;UBERON:0009113!1.60e-07!23;UBERON:0003295!1.60e-07!23;UBERON:0009722!1.60e-07!23;UBERON:0005562!1.60e-07!23;UBERON:0007690!1.60e-07!23;UBERON:0006562!2.63e-07!24;UBERON:0001557!2.63e-07!24;UBERON:0001042!2.63e-07!24;UBERON:0008814!2.63e-07!24;UBERON:0009145!2.63e-07!24;UBERON:0000160!8.66e-07!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,5.44e-11,48;UBERON:0002405,5.44e-11,48;UBERON:0001007,1.15e-10,116;UBERON:0001555,1.15e-10,116;UBERON:0007026,1.15e-10,116;UBERON:0004119,1.62e-10,118;UBERON:0000925,1.62e-10,118;UBERON:0006595,1.62e-10,118;UBERON:0004177,1.66e-10,29;UBERON:0005057,1.66e-10,29;UBERON:0004921,6.05e-10,114;UBERON:0002390,6.79e-10,45;UBERON:0003061,6.79e-10,45;UBERON:0002370,1.72e-08,23;UBERON:0000974,1.72e-08,23;UBERON:0004807,1.72e-08,23;UBERON:0005058,1.72e-08,23;UBERON:0003351,1.72e-08,23;UBERON:0009113,1.72e-08,23;UBERON:0003295,1.72e-08,23;UBERON:0009722,1.72e-08,23;UBERON:0005562,1.72e-08,23;UBERON:0007690,1.72e-08,23;UBERON:0006562,3.08e-08,24;UBERON:0001557,3.08e-08,24;UBERON:0001042,3.08e-08,24;UBERON:0008814,3.08e-08,24;UBERON:0009145,3.08e-08,24;UBERON:0000077,5.65e-08,35;UBERON:0005409,5.70e-08,47;UBERON:0007811,6.47e-08,36;UBERON:0003408,1.07e-07,24;UBERON:0000160,1.76e-07,31 | |||
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| ||
|short_description=p1@Myb | |short_description=p1@Myb | ||
}} | }} |
Latest revision as of 21:18, 25 September 2015
Short description: | p1@Myb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Myb_5end |
Coexpression cluster: | MCL_coexpression_mm9:759 |
Association with transcript: | 106bp_to_ENSMUST00000020156, ENSMUST00000020158, ENSMUST00000169315, NM_001198914, NM_010848, uc007eog.1, uc007eoh.1, uc007eoi.1_5end |
EntrezGene: | Myb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 2.14e-07 | 32 |
hematopoietic oligopotent progenitor cell | 2.14e-07 | 32 |
hematopoietic stem cell | 2.14e-07 | 32 |
hematopoietic multipotent progenitor cell | 2.14e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 5.44e-11 | 48 |
immune system | 5.44e-11 | 48 |
digestive system | 1.15e-10 | 116 |
digestive tract | 1.15e-10 | 116 |
primitive gut | 1.15e-10 | 116 |
endoderm-derived structure | 1.62e-10 | 118 |
endoderm | 1.62e-10 | 118 |
presumptive endoderm | 1.62e-10 | 118 |
hemopoietic organ | 1.66e-10 | 29 |
immune organ | 1.66e-10 | 29 |
subdivision of digestive tract | 6.05e-10 | 114 |
hematopoietic system | 6.79e-10 | 45 |
blood island | 6.79e-10 | 45 |
thymus | 1.72e-08 | 23 |
neck | 1.72e-08 | 23 |
respiratory system epithelium | 1.72e-08 | 23 |
hemolymphoid system gland | 1.72e-08 | 23 |
pharyngeal epithelium | 1.72e-08 | 23 |
thymic region | 1.72e-08 | 23 |
pharyngeal gland | 1.72e-08 | 23 |
entire pharyngeal arch endoderm | 1.72e-08 | 23 |
thymus primordium | 1.72e-08 | 23 |
early pharyngeal endoderm | 1.72e-08 | 23 |
pharynx | 3.08e-08 | 24 |
upper respiratory tract | 3.08e-08 | 24 |
chordate pharynx | 3.08e-08 | 24 |
pharyngeal arch system | 3.08e-08 | 24 |
pharyngeal region of foregut | 3.08e-08 | 24 |
mixed endoderm/mesoderm-derived structure | 5.65e-08 | 35 |
gastrointestinal system | 5.70e-08 | 47 |
craniocervical region | 6.47e-08 | 36 |
gland of gut | 1.07e-07 | 24 |
intestine | 1.76e-07 | 31 |