FFCP PHASE1:Mm9::chr7:133848250..133848276,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr7:133848250..133848276,- to FFCP PHASE1:Mm9::chr7:133848250..133848276,-: NSchange) |
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(7 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=12721 | |EntrezGene=12721 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=36 | |||
|TSSclassifier=NA | |||
|UniProt=D3YW57,O89053,Q3U1N0 | |UniProt=D3YW57,O89053,Q3U1N0 | ||
|association_with_transcript=0bp_to_ENSMUST00000126193,ENSMUST00000131415,NM_009898,uc009jsl.1_5end | |||
|cluster_id=chr7:133848250..133848276,- | |||
|description=CAGE_peak_1_at_Coro1a_5end | |||
|id=chr7:133848250..133848276,- | |||
|ontology_enrichment_celltype=CL:0000988!1.31e-11!32;CL:0002032!1.31e-11!32;CL:0000037!1.31e-11!32;CL:0000566!1.31e-11!32;CL:0000837!1.31e-11!32;CL:0002031!4.43e-09!25;CL:0000738!1.14e-08!17;CL:0002087!1.14e-08!17;CL:0000838!4.85e-08!12;CL:0000084!2.11e-07!11;CL:0000827!2.11e-07!11;CL:0000542!5.47e-07!13;CL:0000051!5.47e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.21e-11,32;CL:0002032,1.21e-11,32;CL:0000037,1.21e-11,32;CL:0000837,1.21e-11,32;CL:0002031,4.09e-09,25;CL:0000738,1.13e-08,17;CL:0002087,1.13e-08,17;CL:0000838,4.81e-08,12;CL:0000084,2.10e-07,11;CL:0000827,2.10e-07,11;CL:0000542,5.43e-07,13;CL:0000051,5.43e-07,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!4.94e-19!48;UBERON:0002390!1.11e-17!45;UBERON:0003061!1.11e-17!45;UBERON:0002405!7.51e-14!70;UBERON:0004177!1.30e-09!29;UBERON:0002371!3.68e-09!16;UBERON:0001474!4.12e-08!22;UBERON:0004765!4.12e-08!22;UBERON:0001434!4.12e-08!22;UBERON:0003408!1.39e-07!24;UBERON:0002370!2.25e-07!23;UBERON:0000974!2.25e-07!23;UBERON:0004807!2.25e-07!23;UBERON:0005058!2.25e-07!23;UBERON:0003351!2.25e-07!23;UBERON:0009113!2.25e-07!23;UBERON:0003295!2.25e-07!23;UBERON:0009722!2.25e-07!23;UBERON:0005562!2.25e-07!23;UBERON:0007690!2.25e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,3.81e-19,48;UBERON:0002405,3.81e-19,48;UBERON:0002390,8.60e-18,45;UBERON:0003061,8.60e-18,45;UBERON:0004177,1.05e-09,29;UBERON:0005057,1.05e-09,29;UBERON:0002371,3.65e-09,16;UBERON:0001474,4.78e-08,22;UBERON:0004765,4.78e-08,22;UBERON:0001434,4.78e-08,22;UBERON:0003408,1.13e-07,24;UBERON:0002370,1.84e-07,23;UBERON:0000974,1.84e-07,23;UBERON:0004807,1.84e-07,23;UBERON:0005058,1.84e-07,23;UBERON:0003351,1.84e-07,23;UBERON:0009113,1.84e-07,23;UBERON:0003295,1.84e-07,23;UBERON:0009722,1.84e-07,23;UBERON:0005562,1.84e-07,23;UBERON:0007690,1.84e-07,23;UBERON:0000077,4.69e-07,35;UBERON:0006562,8.41e-07,24;UBERON:0001557,8.41e-07,24;UBERON:0001042,8.41e-07,24;UBERON:0008814,8.41e-07,24;UBERON:0009145,8.41e-07,24 | |||
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| ||
|short_description=p1@Coro1a | |||
}} | }} |
Latest revision as of 21:26, 25 September 2015
Short description: | p1@Coro1a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Coro1a_5end |
Coexpression cluster: | MCL_coexpression_mm9:36 |
Association with transcript: | 0bp_to_ENSMUST00000126193, ENSMUST00000131415, NM_009898, uc009jsl.1_5end |
EntrezGene: | Coro1a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 1.21e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.21e-11 | 32 |
hematopoietic stem cell | 1.21e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.21e-11 | 32 |
hematopoietic lineage restricted progenitor cell | 4.09e-09 | 25 |
leukocyte | 1.13e-08 | 17 |
nongranular leukocyte | 1.13e-08 | 17 |
lymphoid lineage restricted progenitor cell | 4.81e-08 | 12 |
T cell | 2.10e-07 | 11 |
pro-T cell | 2.10e-07 | 11 |
lymphocyte | 5.43e-07 | 13 |
common lymphoid progenitor | 5.43e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 3.81e-19 | 48 |
immune system | 3.81e-19 | 48 |
hematopoietic system | 8.60e-18 | 45 |
blood island | 8.60e-18 | 45 |
hemopoietic organ | 1.05e-09 | 29 |
immune organ | 1.05e-09 | 29 |
bone marrow | 3.65e-09 | 16 |
bone element | 4.78e-08 | 22 |
skeletal element | 4.78e-08 | 22 |
skeletal system | 4.78e-08 | 22 |
gland of gut | 1.13e-07 | 24 |
thymus | 1.84e-07 | 23 |
neck | 1.84e-07 | 23 |
respiratory system epithelium | 1.84e-07 | 23 |
hemolymphoid system gland | 1.84e-07 | 23 |
pharyngeal epithelium | 1.84e-07 | 23 |
thymic region | 1.84e-07 | 23 |
pharyngeal gland | 1.84e-07 | 23 |
entire pharyngeal arch endoderm | 1.84e-07 | 23 |
thymus primordium | 1.84e-07 | 23 |
early pharyngeal endoderm | 1.84e-07 | 23 |
mixed endoderm/mesoderm-derived structure | 4.69e-07 | 35 |
pharynx | 8.41e-07 | 24 |
upper respiratory tract | 8.41e-07 | 24 |
chordate pharynx | 8.41e-07 | 24 |
pharyngeal arch system | 8.41e-07 | 24 |
pharyngeal region of foregut | 8.41e-07 | 24 |