FFCP PHASE1:Mm9::chr10:27336825..27336853,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:27336825..27336853,-
|short_description=p4@Lama2
|description=CAGE_peak_4_at_Lama2_5end
|association_with_transcript=-77bp_to_ENSMUST00000092638,ENSMUST00...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=16773 | |EntrezGene=16773 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=209 | |||
|TSSclassifier=NA | |||
|UniProt=E9QNV4,F8VQ43,E9Q965,Q5DTP0,Q8C9J2 | |UniProt=E9QNV4,F8VQ43,E9Q965,Q5DTP0,Q8C9J2 | ||
|association_with_transcript=-77bp_to_ENSMUST00000092638,ENSMUST00000092639,ENSMUST00000169199,NM_008481,uc007esg.1,uc007esh.1,uc007esi.1_5end | |||
|cluster_id=chr10:27336825..27336853,- | |||
|description=CAGE_peak_4_at_Lama2_5end | |||
|id=chr10:27336825..27336853,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!1.49e-08!333;UBERON:0000991!4.76e-07!18;UBERON:0005564!4.76e-07!18;UBERON:0004176!5.83e-07!17;UBERON:0009196!5.83e-07!17;UBERON:0009117!5.83e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004176,1.03e-10,17;UBERON:0009196,1.03e-10,17;UBERON:0009117,1.03e-10,17;UBERON:0000991,7.31e-10,18;UBERON:0005564,7.31e-10,18;UBERON:0000473,2.71e-08,14;UBERON:0003135,1.61e-07,15;UBERON:0005156,2.08e-07,26;UBERON:0000990,2.08e-07,26;UBERON:0003133,2.74e-07,24;UBERON:0003101,7.57e-07,16;UBERON:0000079,7.57e-07,16;UBERON:0007100,9.15e-07,18;UBERON:0000948,9.15e-07,18;UBERON:0005498,9.15e-07,18;UBERON:0004140,9.15e-07,18;UBERON:0009881,9.15e-07,18;UBERON:0004141,9.15e-07,18;UBERON:0003084,9.15e-07,18;UBERON:0007005,9.15e-07,18;UBERON:0004139,9.15e-07,18;UBERON:0004291,9.15e-07,18 | |||
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0.218025156380447,0,0.388859798148567,0.139986421625363,0,0,0,0,1.54355661621568,1.14613375975503,1.54701627683233,0,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0,0.210324961351382,0,0.220868540951614,0,0.191690942036473,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0,0,0,0.589257170947335,0.569486723196412,0,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.742210695324124,0.693941307064543,0.913396434936424,1.15307748628029,0.60289056221049,3.29248379979973,0.125666591329675,0.247194967734374,0,0,0.970601099684455,0.220841518460394,0.484875253135222,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,0,0,0,0.347648640384553,0.255715457330331,0,0.162241263067758,6.61955865027056,1.11966273549084,0,0.631325567659422,3.513251959993,1.37941262660084,2.16074555766419,2.10986744970001,1.97305847538851,0.896796041993948,0.937017245597288,0.776110112217047,1.5089759505299,3.40390944302075,0.527853372491847,1.53437012699302,1.66828349535359,2.78601733217733,2.05782136407943,0.796137067273973,0,0,0,1.03562886267751,1.17263029990548,0.36012412292203,1.65721314909647,1.18058539048442,0.308534225774757,0.465067889500816,1.07309360559848,1.63471479314037,0.987359099480883,2.13417703302824,2.10778904819225,1.90059983652932,1.75640092232841,1.47627060636409,0,0.205809224758569,0.330418782983798,0,0.213288250535234,0.464473343720877,0.38660238396628,0.403367049246685,0.444756087689741,0.190225626112559,0,1.64698954724011,1.00534083520108,0.198956472041151,1.36474860983384,0.898819408654221,0.864552199498777,0,0.379335801906163,0.685491075658373,0,1.01825663922657,0.581857461502877,0.98190147846446,0.885311519739602,1.18088118383682,0.31399745568275,1.35736880313981,0,0.166845105716094,0,0.224862112384854,0,0,0.50925170356284,0,0,0.274561413188081,0,1.11642284300551,0.312037673114561,0.252578877947112,0,0,0.184753190166605,1.32643988239339,0.488894929326078,0.339490171550376,0.704070744865506,0.335012514883631,0.476087281772027,0.780534591431195,0.945810864637146,0.44292937929755,0.797273843287435,0.491589944147214,0.863424909329478,0.578596234326046,0,0,1.47529281905711,0,0.321101179975584,0.117211686592203,0.163934945376675,1.00988370881749,0,0.780877488593277,0.215423397732799,0,0,0,0,0,0.395287777946524,0.321321316421807,1.41940085208269,2.31485284767432,2.93196526836437,1.64970122972535,0,0,0,0.754420319023592,0.295301892880773,0.307435147943927,0.775284879504663,0.363533729477506,1.42598951353889,0.316036757935816,0,0,0.340439605753788,0.720244376125241,0.258717367565509,0.857348140126369,1.59606210278046,0.713475270408282,1.15184314421485,1.2178597964584,0,0,0.220528398054962,0.49465875882444,2.58343082713449,1.32688434841943,1.19372344003136,0.164140899745061,0.291480836629851,0,0.341741761595705,2.27025554759545,3.88908507476395,0.376736914009382,0.410082683163076,0,0,0,0,0,0.949007980743406,2.03319467126849,1.18805874903981,2.09088296014469,0.436725127492355,0.944050424693745,1.48776220305605,0.785267825952089,0.259229946583586,0.621339313086926,0,2.69129782879162,1.32366792365678,6.02798683866548,5.68303223302017,8.10989402355735,15.6085127398853,8.46328501485676,5.24296722128554,0.483168241652012,1.15212002503146,0.948033361884535,0,0.308132871494482,0.25984164595559,0.179026695667481,0.198681354781265,0,0.147689527174577,0.201932899896295,0,0.100826185136841,0,0,0.116876902181569,0.226730383615211,0,0,0,0.772758376128762,0.563047426353546,1.46521299413812,0.428736758158132,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.62272408550506,1.19707462020309,2.21953687480374,0.972426868273176,0.209613162627982,0.919217542250071,2.00022055021454,0.618105171716683,0,2.52697211763797,1.52087579934144,2.64076877940507,0.936415074698824,1.79270426733634,1.03383844120104,4.28664322154766,1.39061191133827,1.15745532278223,2.47251540481984,2.20798380201596,2.05721551431249,1.59728225543404,1.90748951957857,1.30811774969096,2.25862512996793,1.4384483341585,2.19513567447327,1.31534855718921,1.49384525230448,2.80571135828869,2.01679530811096,1.47756723563345,1.22769312950907,0.77468420592983,1.54325288784913,0.749431733813838,0.701794825336225,1.07435527024149,1.91288332068843,2.8676884485537,0.927471342481686 | |phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0,0.218025156380447,0,0.388859798148567,0.139986421625363,0,0,0,0,1.54355661621568,1.14613375975503,1.54701627683233,0,0.528990979272033,0,0,0,0,0,0,0,0,0.207379224616955,0,0.210324961351382,0,0.220868540951614,0,0.191690942036473,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0,0,0,0.589257170947335,0.569486723196412,0,0.075726193333184,0.226714680320357,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.704217098883403,0,0,0,0,0,0,0.22836775943812,0.258937883647172,0.742210695324124,0.693941307064543,0.913396434936424,1.15307748628029,0.60289056221049,3.29248379979973,0.125666591329675,0.247194967734374,0,0,0.970601099684455,0.220841518460394,0.484875253135222,0,0.292780797011547,0.209446706813455,0.255457055208591,0,0,0,0,0,0,0.347648640384553,0.255715457330331,0,0.162241263067758,6.61955865027056,1.11966273549084,0,0.631325567659422,3.513251959993,1.37941262660084,2.16074555766419,2.10986744970001,1.97305847538851,0.896796041993948,0.937017245597288,0.776110112217047,1.5089759505299,3.40390944302075,0.527853372491847,1.53437012699302,1.66828349535359,2.78601733217733,2.05782136407943,0.796137067273973,0,0,0,1.03562886267751,1.17263029990548,0.36012412292203,1.65721314909647,1.18058539048442,0.308534225774757,0.465067889500816,1.07309360559848,1.63471479314037,0.987359099480883,2.13417703302824,2.10778904819225,1.90059983652932,1.75640092232841,1.47627060636409,0,0.205809224758569,0.330418782983798,0,0.213288250535234,0.464473343720877,0.38660238396628,0.403367049246685,0.444756087689741,0.190225626112559,0,1.64698954724011,1.00534083520108,0.198956472041151,1.36474860983384,0.898819408654221,0.864552199498777,0,0.379335801906163,0.685491075658373,0,1.01825663922657,0.581857461502877,0.98190147846446,0.885311519739602,1.18088118383682,0.31399745568275,1.35736880313981,0,0.166845105716094,0,0.224862112384854,0,0,0.50925170356284,0,0,0.274561413188081,0,1.11642284300551,0.312037673114561,0.252578877947112,0,0,0.184753190166605,1.32643988239339,0.488894929326078,0.339490171550376,0.704070744865506,0.335012514883631,0.476087281772027,0.780534591431195,0.945810864637146,0.44292937929755,0.797273843287435,0.491589944147214,0.863424909329478,0.578596234326046,0,0,1.47529281905711,0,0.321101179975584,0.117211686592203,0.163934945376675,1.00988370881749,0,0.780877488593277,0.215423397732799,0,0,0,0,0,0.395287777946524,0.321321316421807,1.41940085208269,2.31485284767432,2.93196526836437,1.64970122972535,0,0,0,0.754420319023592,0.295301892880773,0.307435147943927,0.775284879504663,0.363533729477506,1.42598951353889,0.316036757935816,0,0,0.340439605753788,0.720244376125241,0.258717367565509,0.857348140126369,1.59606210278046,0.713475270408282,1.15184314421485,1.2178597964584,0,0,0.220528398054962,0.49465875882444,2.58343082713449,1.32688434841943,1.19372344003136,0.164140899745061,0.291480836629851,0,0.341741761595705,2.27025554759545,3.88908507476395,0.376736914009382,0.410082683163076,0,0,0,0,0,0.949007980743406,2.03319467126849,1.18805874903981,2.09088296014469,0.436725127492355,0.944050424693745,1.48776220305605,0.785267825952089,0.259229946583586,0.621339313086926,0,2.69129782879162,1.32366792365678,6.02798683866548,5.68303223302017,8.10989402355735,15.6085127398853,8.46328501485676,5.24296722128554,0.483168241652012,1.15212002503146,0.948033361884535,0,0.308132871494482,0.25984164595559,0.179026695667481,0.198681354781265,0,0.147689527174577,0.201932899896295,0,0.100826185136841,0,0,0.116876902181569,0.226730383615211,0,0,0,0.772758376128762,0.563047426353546,1.46521299413812,0.428736758158132,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.62272408550506,1.19707462020309,2.21953687480374,0.972426868273176,0.209613162627982,0.919217542250071,2.00022055021454,0.618105171716683,0,2.52697211763797,1.52087579934144,2.64076877940507,0.936415074698824,1.79270426733634,1.03383844120104,4.28664322154766,1.39061191133827,1.15745532278223,2.47251540481984,2.20798380201596,2.05721551431249,1.59728225543404,1.90748951957857,1.30811774969096,2.25862512996793,1.4384483341585,2.19513567447327,1.31534855718921,1.49384525230448,2.80571135828869,2.01679530811096,1.47756723563345,1.22769312950907,0.77468420592983,1.54325288784913,0.749431733813838,0.701794825336225,1.07435527024149,1.91288332068843,2.8676884485537,0.927471342481686 | ||
|short_description=p4@Lama2 | |||
}} | }} |
Latest revision as of 22:27, 25 September 2015
Short description: | p4@Lama2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Lama2_5end |
Coexpression cluster: | MCL_coexpression_mm9:209 |
Association with transcript: | -77bp_to_ENSMUST00000092638, ENSMUST00000092639, ENSMUST00000169199, NM_008481, uc007esg.1, uc007esh.1, uc007esi.1_5end |
EntrezGene: | Lama2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
external genitalia | 1.03e-10 | 17 |
indifferent external genitalia | 1.03e-10 | 17 |
indifferent gonad | 1.03e-10 | 17 |
gonad | 7.31e-10 | 18 |
gonad primordium | 7.31e-10 | 18 |
testis | 2.71e-08 | 14 |
male reproductive organ | 1.61e-07 | 15 |
reproductive structure | 2.08e-07 | 26 |
reproductive system | 2.08e-07 | 26 |
reproductive organ | 2.74e-07 | 24 |
male organism | 7.57e-07 | 16 |
male reproductive system | 7.57e-07 | 16 |
primary circulatory organ | 9.15e-07 | 18 |
heart | 9.15e-07 | 18 |
primitive heart tube | 9.15e-07 | 18 |
primary heart field | 9.15e-07 | 18 |
anterior lateral plate mesoderm | 9.15e-07 | 18 |
heart tube | 9.15e-07 | 18 |
heart primordium | 9.15e-07 | 18 |
cardiac mesoderm | 9.15e-07 | 18 |
cardiogenic plate | 9.15e-07 | 18 |
heart rudiment | 9.15e-07 | 18 |