FFCP PHASE1:Mm9::chr19:53526008..53526024,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=381232 | |EntrezGene=381232 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1731 | |MCL_coexpression_id=1731 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-15bp_to_uc012bnj.1_5end | |association_with_transcript=-15bp_to_uc012bnj.1_5end | ||
|cluster_id=chr19:53526008..53526024,- | |||
|description=CAGE_peak_2_at_5830416P10Rik_5end | |description=CAGE_peak_2_at_5830416P10Rik_5end | ||
|id=chr19:53526008..53526024,- | |id=chr19:53526008..53526024,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,3.34e-21,3;CL:0000351,3.34e-21,3;CL:0000068,8.52e-21,3;CL:0002202,8.52e-21,3;CL:0000069,8.52e-21,3;CL:0002632,8.52e-21,3;CL:0002368,8.52e-21,3;CL:0000307,8.52e-21,3;CL:0000377,8.52e-21,3;CL:0002494,6.83e-10,3;CL:0000737,6.83e-10,3;CL:0000746,6.83e-10,3;CL:0000513,6.83e-10,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003100!5.75e-07!11;UBERON:0000474!8.62e-07!9;UBERON:0000014!9.08e-07!5;UBERON:0001003!9.08e-07!5;UBERON:0002097!9.08e-07!5;UBERON:0002199!9.08e-07!5;UBERON:0007029!9.08e-07!5;UBERON:0007376!9.08e-07!5;UBERON:0002416!9.08e-07!5;UBERON:0007383!9.08e-07!5 | |ontology_enrichment_uberon=UBERON:0003100!5.75e-07!11;UBERON:0000474!8.62e-07!9;UBERON:0000014!9.08e-07!5;UBERON:0001003!9.08e-07!5;UBERON:0002097!9.08e-07!5;UBERON:0002199!9.08e-07!5;UBERON:0007029!9.08e-07!5;UBERON:0007376!9.08e-07!5;UBERON:0002416!9.08e-07!5;UBERON:0007383!9.08e-07!5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.78e-21,3;UBERON:0000478,1.78e-21,3;UBERON:0000158,1.78e-21,3;UBERON:0000358,3.34e-21,3;UBERON:0000307,3.34e-21,3;UBERON:0007010,3.34e-21,3;UBERON:0003126,8.52e-21,3;UBERON:0001005,8.52e-21,3;UBERON:0007196,8.52e-21,3;UBERON:0001558,8.52e-21,3;UBERON:0001987,8.97e-15,2;UBERON:0003124,8.97e-15,2;UBERON:0004340,8.97e-15,2;UBERON:0000305,2.16e-08,1;UBERON:0005795,7.72e-08,4;UBERON:0000995,7.72e-08,4 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28629718017973,0,6.70373719960675,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24736561516821,2.78695852022608,2.52762222507392,0,0,0,0,0,0,0,0.117588707135705,0,9.14621380617183,0.433798070759735,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0.457500602818626,0,0.347648640384553,0.511430914660661,0,0.162241263067758,0.407357455401265,0,0,0,0,0,0,0,0.136072998302656,0,0,0,0,0,0.175951124163949,0.219195732427575,0.834141747676794,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0,0.630869845692382,0.205809224758569,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0,0,0,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.488660878060728,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,2.11204537257339,17.1583977399694,0,0.49465875882444,0.161464426695906,0.241251699712623,1.3130957840345,3.61109979439135,0,0,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,1.33191572024439,9.50966880060442,5.87596157274275,0.386379188064381,0.187682475451182,0,0.643105137237198,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0.548783918618318,0.263069711437843,0,0.561142271657738,0,0,0,0,0,0.249810577937946,0.233931608445408,0,0,0.441182838239031,0 | |phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28629718017973,0,6.70373719960675,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151452386666368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.24736561516821,2.78695852022608,2.52762222507392,0,0,0,0,0,0,0,0.117588707135705,0,9.14621380617183,0.433798070759735,0,0,0,0,0,0,0.209446706813455,0,0,0,0,0,0.457500602818626,0,0.347648640384553,0.511430914660661,0,0.162241263067758,0.407357455401265,0,0,0,0,0,0,0,0.136072998302656,0,0,0,0,0,0.175951124163949,0.219195732427575,0.834141747676794,0,0.205782136407943,0.199034266818493,0,0,0,0,0,0,0,0.196764231747404,0,0,0,0.116765342367169,0.16455984991348,0.164167464079095,0,0,0.219550115291051,0,0.630869845692382,0.205809224758569,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325929952884052,0,0,0,0,0,0.157635144106191,0,0,0,0,0.144649058581512,0,0,0.491764273019036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0.488660878060728,0.329940245945071,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178368817602071,0,0,2.11204537257339,17.1583977399694,0,0.49465875882444,0.161464426695906,0.241251699712623,1.3130957840345,3.61109979439135,0,0,0,0,0.185194527369712,0,0,0,0,0.139951452323658,0,0,0,0,0.216010681643603,0.209088296014469,0.218362563746178,0.269728692769641,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680191150845634,1.33191572024439,9.50966880060442,5.87596157274275,0.386379188064381,0.187682475451182,0,0.643105137237198,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0.412085900803307,0,0,0,0,0,0.0941093804153306,0.0846146078916765,0.548783918618318,0.263069711437843,0,0.561142271657738,0,0,0,0,0,0.249810577937946,0.233931608445408,0,0,0.441182838239031,0 | ||
|short_description=p2@5830416P10Rik | |short_description=p2@5830416P10Rik | ||
}} | }} |
Latest revision as of 23:03, 25 September 2015
Short description: | p2@5830416P10Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_5830416P10Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:1731 |
Association with transcript: | -15bp_to_uc012bnj.1_5end |
EntrezGene: | 5830416P10Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 3.34e-21 | 3 |
trophoblast cell | 3.34e-21 | 3 |
duct epithelial cell | 8.52e-21 | 3 |
epithelial cell of tracheobronchial tree | 8.52e-21 | 3 |
branched duct epithelial cell | 8.52e-21 | 3 |
epithelial cell of lower respiratory tract | 8.52e-21 | 3 |
respiratory epithelial cell | 8.52e-21 | 3 |
tracheal epithelial cell | 8.52e-21 | 3 |
tracheoblast | 8.52e-21 | 3 |
cardiocyte | 6.83e-10 | 3 |
striated muscle cell | 6.83e-10 | 3 |
cardiac muscle cell | 6.83e-10 | 3 |
cardiac muscle myoblast | 6.83e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.78e-21 | 3 |
extraembryonic structure | 1.78e-21 | 3 |
membranous layer | 1.78e-21 | 3 |
blastocyst | 3.34e-21 | 3 |
blastula | 3.34e-21 | 3 |
cleaving embryo | 3.34e-21 | 3 |
trachea | 8.52e-21 | 3 |
respiratory airway | 8.52e-21 | 3 |
tracheobronchial tree | 8.52e-21 | 3 |
lower respiratory tract | 8.52e-21 | 3 |
placenta | 8.97e-15 | 2 |
chorion | 8.97e-15 | 2 |
allantois | 8.97e-15 | 2 |
amnion | 2.16e-08 | 1 |
embryonic uterus | 7.72e-08 | 4 |
uterus | 7.72e-08 | 4 |