FFCP PHASE1:Mm9::chr17:13108868..13108910,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67681 | |EntrezGene=67681 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=79 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_ENSMUST00000162978_5end | |association_with_transcript=24bp_to_ENSMUST00000162978_5end | ||
|cluster_id=chr17:13108868..13108910,- | |||
|description=CAGE_peak_2_at_Mrpl18_5end | |description=CAGE_peak_2_at_Mrpl18_5end | ||
|id=chr17:13108868..13108910,- | |id=chr17:13108868..13108910,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!5.25e-09!15;UBERON:0001242!4.97e-08!13;UBERON:0000060!4.97e-08!13;UBERON:0001262!4.97e-08!13;UBERON:0004786!4.97e-08!13;UBERON:0000160!7.50e-08!43;UBERON:0007100!6.31e-07!18;UBERON:0000948!6.31e-07!18;UBERON:0005498!6.31e-07!18;UBERON:0004140!6.31e-07!18;UBERON:0009881!6.31e-07!18;UBERON:0004141!6.31e-07!18;UBERON:0003084!6.31e-07!18;UBERON:0007005!6.31e-07!18;UBERON:0004139!6.31e-07!18;UBERON:0004291!6.31e-07!18 | |ontology_enrichment_uberon=UBERON:0000344!5.25e-09!15;UBERON:0001242!4.97e-08!13;UBERON:0000060!4.97e-08!13;UBERON:0001262!4.97e-08!13;UBERON:0004786!4.97e-08!13;UBERON:0000160!7.50e-08!43;UBERON:0007100!6.31e-07!18;UBERON:0000948!6.31e-07!18;UBERON:0005498!6.31e-07!18;UBERON:0004140!6.31e-07!18;UBERON:0009881!6.31e-07!18;UBERON:0004141!6.31e-07!18;UBERON:0003084!6.31e-07!18;UBERON:0007005!6.31e-07!18;UBERON:0004139!6.31e-07!18;UBERON:0004291!6.31e-07!18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.35e-12,31;UBERON:0000344,5.21e-09,15;UBERON:0005409,1.52e-08,47;UBERON:0001242,4.94e-08,13;UBERON:0001262,4.94e-08,13;UBERON:0004786,4.94e-08,13;UBERON:0007100,6.21e-07,18;UBERON:0000948,6.21e-07,18;UBERON:0005498,6.21e-07,18;UBERON:0004140,6.21e-07,18;UBERON:0009881,6.21e-07,18;UBERON:0004141,6.21e-07,18;UBERON:0003084,6.21e-07,18;UBERON:0007005,6.21e-07,18;UBERON:0004139,6.21e-07,18;UBERON:0004291,6.21e-07,18 | |||
|phase1_expression=5.12476310735341,11.8651638597383,16.3799726180233,16.030603199262,11.0197060588196,10.5763941304491,11.9142446703718,2.06597317506522,4.50523910885334,3.04283884218592,1.19852577757853,2.23362045186942,1.36960583944965,1.13646523144697,2.99798785634096,2.22722794128809,2.09868563438444,1.10411757875383,1.23402990245165,2.12194825899015,3.48677489619386,6.95036658406197,8.097193463307,11.6794468639187,13.0763290208287,17.2269589234506,21.9688618041128,16.5912849168135,14.0617330397717,14.1136872665561,20.8426680015986,1.27006134691926,1.23012957516914,0,14.4425809875637,18.4520456347927,14.0876855821035,1.25559489221072,5.4693474116666,0.523523743973798,0.588231488031014,1.36609096991689,0.485510353031154,1.6366586336825,0.912392380975631,0.917733760808408,1.56478268869608,1.30815093828268,1.31811709640683,0.972149495371417,1.81982348112971,0,1.8456086666351,2.90144856804538,7.73015738027667,0.514518872071894,1.43266719969378,0.515672092277442,5.66486090406874,4.7609188134483,3.1691570175309,1.0165335962074,0.889294796111139,0.449949858640699,1.97773272513395,0,0.599200221036809,0.384218305321555,1.65903379693564,1.4850653216486,1.05162480675691,7.7125765789027,9.27647871996777,1.46988959057945,2.01275489138296,2.75765635983006,4.40463523997555,5.87361755191863,5.37622866396852,3.69281605644543,5.21479568533735,3.64639359389732,8.37548997004143,3.93933827022176,5.34793867218835,4.41942878210502,6.26435395516053,9.31997229126503,1.06016670666458,1.13357340160178,1.44932244350839,3.44169550792555,4.0798280022465,3.2382191498269,3.89865850468601,7.6164570806547,8.84799846830037,1.87473354835864,1.29893002301434,1.41335829804136,5.0703631119605,0,0,7.11066703153331,1.94841936910093,2.02687892380079,1.01104889002957,8.79215873836762,1.55362730188303,1.7813056687779,9.36820764537134,8.22056791442781,4.84292544237723,6.48107354376277,5.17390311397101,6.28332956648377,0.247194967734374,21.256105467227,3.5384422077995,6.79420769779119,4.41683036920787,4.84875253135222,3.72783522436244,3.80615036115011,3.77004072264219,10.7291963187608,5.39168060276641,8.99854096490112,7.87835407853001,4.94309110035915,3.20250421973039,2.51308704225729,4.69325664519146,3.06858548796397,7.68815764870372,4.54275536589721,1.52759045775474,4.10543003013307,4.54900965180614,4.62972082950243,3.25301107406759,3.44853156650209,2.52086981727489,2.10986744970001,1.7009124787832,4.61209393025459,2.34254311399322,3.88055056108524,4.31135985865684,1.51284864134255,2.11141348996739,3.5071317188412,1.94633074457919,2.43776516565517,2.26360350048738,2.18937693500343,20.3641824320838,14.9261786126535,11.3665399758237,16.3629360303046,13.6025114789036,18.0062061461015,12.5474709860161,23.2181793461937,20.9803273526834,35.8102274915628,33.2659017735528,36.7810828456584,47.0641170752554,45.4743875499094,48.0738040606924,45.1757961144277,39.9581209829712,25.3650131457103,3.99550902271842,2.16099685996497,8.92130714056255,15.3381328664856,3.41261200856374,4.87697010906921,6.70110798874885,10.8909103296605,12.6755484991576,7.98947629672748,7.59246498471219,12.0230236948528,8.04272668160862,9.54991065797524,7.99352757188393,11.6846523125049,9.72621224436124,13.3424653080426,3.41402221715547,4.79843752960861,2.25415471346161,6.10953983535943,4.84881217919064,3.85747009396752,6.63983639804701,7.82333784291891,7.06494275286187,9.99517027766584,10.0793893209631,3.67059232575407,4.71741588271687,4.72210436008193,3.24576194221605,3.13530307678142,5.0925170356284,3.16465751195892,6.64754429777645,2.74561413188081,1.43768206527355,2.97712758134803,6.55279113540577,6.81962970457202,6.09951205974501,10.1313139486307,0.554259570499814,3.7898282354097,4.07412441105065,2.8856664581782,2.81628297946203,2.84760637651087,2.61848004974615,2.73187107000918,2.20689201748667,1.32878813789265,1.59454768657487,1.47476983244164,1.03610989119537,0.578596234326046,0,2.17562273527484,1.96705709207614,3.58717770196152,6.74312477948726,6.32943107597897,4.26230857979356,8.07906967053994,2.2085575359138,4.29482618726302,3.87762115919038,2.86762557543062,2.00518806674155,0.566153061577665,2.83367491172426,3.50707029493574,1.97643888973262,3.53453448063988,2.6968616189571,2.84904965867608,1.30309567482861,0.659880491890142,1.32745138339963,4.12727081463468,7.25576536715402,5.46954731292105,2.95301892880773,2.45948118355142,3.10113951801865,5.08947221268508,6.41695281092498,1.8962205476149,2.10837217149998,1.03135543248187,2.7235168460303,4.50152735078276,4.78627129996192,5.14408884075822,7.80297028026004,3.56737635204141,5.26556865926787,3.65357938937519,3.05073220482823,2.33015277950202,1.54369878638473,1.15420377059036,2.26050197374268,3.79971427047382,1.07435109602823,1.31312719796049,10.2018292820448,5.7481843623258,2.22132145037209,3.09580301944834,2.59272338317596,3.01389531207506,2.87057878214153,2.51655990527175,2.37969801991397,4.47844647435706,3.17859939750175,4.77335309007557,3.47969592939249,3.86306987541013,4.10420295122845,4.80903080833278,3.9305261474312,4.98998081623837,5.78574190077352,10.4702376793612,6.48074866458964,6.83473244395618,1.69107881605257,3.43888055901151,3.97100377097034,3.11121901350476,3.35815541042101,2.87225413334323,3.87278887530988,3.3853140059427,1.99232754408851,1.20792060413003,2.01621004380506,6.00421129193539,4.45995473638361,6.36807934421929,8.96453678546786,5.37080087002444,6.15912199821921,6.37035882455835,6.05527061415767,6.15895344683701,5.33447646584999,5.84791873793675,3.99577311032985,3.75226182397285,2.92192255453922,6.80191150845634,0.221985953374065,1.88399098879899,2.3503846290971,0.772758376128762,0.750729901804728,0.915758121336325,0.214368379079066,0,7.90652579663893,5.9842280745933,5.15605962095457,4.29632955859219,2.74033007908257,7.55393897389701,6.07520250208625,2.70192721934532,4.53142408984205,4.14208249401456,3.94391920819871,2.39414924040619,3.24393850932855,4.61902762429759,3.98265008993166,7.35374033800057,10.0011027510727,9.88968274746692,6.73930340142812,7.07552192938633,8.61829619626815,8.11093267960128,9.64507526939789,8.9635213366817,7.98353018483024,10.9547548995107,10.5454736609819,10.2241886845764,9.89006161927936,9.27353196846703,12.0004238334895,9.40621772644489,9.77588378784016,9.44751708110135,10.1638130848557,7.86915853392591,9.51225458938417,8.41823076601097,9.64209208305619,8.97827634652382,8.77899134118889,7.68334962529395,8.18462086339379,8.2116525828562,7.71626443924566,1.99848462350357,4.91256377735358,7.09074478359384,10.3295699317175,6.61774257358547,7.65163857547391 | |phase1_expression=5.12476310735341,11.8651638597383,16.3799726180233,16.030603199262,11.0197060588196,10.5763941304491,11.9142446703718,2.06597317506522,4.50523910885334,3.04283884218592,1.19852577757853,2.23362045186942,1.36960583944965,1.13646523144697,2.99798785634096,2.22722794128809,2.09868563438444,1.10411757875383,1.23402990245165,2.12194825899015,3.48677489619386,6.95036658406197,8.097193463307,11.6794468639187,13.0763290208287,17.2269589234506,21.9688618041128,16.5912849168135,14.0617330397717,14.1136872665561,20.8426680015986,1.27006134691926,1.23012957516914,0,14.4425809875637,18.4520456347927,14.0876855821035,1.25559489221072,5.4693474116666,0.523523743973798,0.588231488031014,1.36609096991689,0.485510353031154,1.6366586336825,0.912392380975631,0.917733760808408,1.56478268869608,1.30815093828268,1.31811709640683,0.972149495371417,1.81982348112971,0,1.8456086666351,2.90144856804538,7.73015738027667,0.514518872071894,1.43266719969378,0.515672092277442,5.66486090406874,4.7609188134483,3.1691570175309,1.0165335962074,0.889294796111139,0.449949858640699,1.97773272513395,0,0.599200221036809,0.384218305321555,1.65903379693564,1.4850653216486,1.05162480675691,7.7125765789027,9.27647871996777,1.46988959057945,2.01275489138296,2.75765635983006,4.40463523997555,5.87361755191863,5.37622866396852,3.69281605644543,5.21479568533735,3.64639359389732,8.37548997004143,3.93933827022176,5.34793867218835,4.41942878210502,6.26435395516053,9.31997229126503,1.06016670666458,1.13357340160178,1.44932244350839,3.44169550792555,4.0798280022465,3.2382191498269,3.89865850468601,7.6164570806547,8.84799846830037,1.87473354835864,1.29893002301434,1.41335829804136,5.0703631119605,0,0,7.11066703153331,1.94841936910093,2.02687892380079,1.01104889002957,8.79215873836762,1.55362730188303,1.7813056687779,9.36820764537134,8.22056791442781,4.84292544237723,6.48107354376277,5.17390311397101,6.28332956648377,0.247194967734374,21.256105467227,3.5384422077995,6.79420769779119,4.41683036920787,4.84875253135222,3.72783522436244,3.80615036115011,3.77004072264219,10.7291963187608,5.39168060276641,8.99854096490112,7.87835407853001,4.94309110035915,3.20250421973039,2.51308704225729,4.69325664519146,3.06858548796397,7.68815764870372,4.54275536589721,1.52759045775474,4.10543003013307,4.54900965180614,4.62972082950243,3.25301107406759,3.44853156650209,2.52086981727489,2.10986744970001,1.7009124787832,4.61209393025459,2.34254311399322,3.88055056108524,4.31135985865684,1.51284864134255,2.11141348996739,3.5071317188412,1.94633074457919,2.43776516565517,2.26360350048738,2.18937693500343,20.3641824320838,14.9261786126535,11.3665399758237,16.3629360303046,13.6025114789036,18.0062061461015,12.5474709860161,23.2181793461937,20.9803273526834,35.8102274915628,33.2659017735528,36.7810828456584,47.0641170752554,45.4743875499094,48.0738040606924,45.1757961144277,39.9581209829712,25.3650131457103,3.99550902271842,2.16099685996497,8.92130714056255,15.3381328664856,3.41261200856374,4.87697010906921,6.70110798874885,10.8909103296605,12.6755484991576,7.98947629672748,7.59246498471219,12.0230236948528,8.04272668160862,9.54991065797524,7.99352757188393,11.6846523125049,9.72621224436124,13.3424653080426,3.41402221715547,4.79843752960861,2.25415471346161,6.10953983535943,4.84881217919064,3.85747009396752,6.63983639804701,7.82333784291891,7.06494275286187,9.99517027766584,10.0793893209631,3.67059232575407,4.71741588271687,4.72210436008193,3.24576194221605,3.13530307678142,5.0925170356284,3.16465751195892,6.64754429777645,2.74561413188081,1.43768206527355,2.97712758134803,6.55279113540577,6.81962970457202,6.09951205974501,10.1313139486307,0.554259570499814,3.7898282354097,4.07412441105065,2.8856664581782,2.81628297946203,2.84760637651087,2.61848004974615,2.73187107000918,2.20689201748667,1.32878813789265,1.59454768657487,1.47476983244164,1.03610989119537,0.578596234326046,0,2.17562273527484,1.96705709207614,3.58717770196152,6.74312477948726,6.32943107597897,4.26230857979356,8.07906967053994,2.2085575359138,4.29482618726302,3.87762115919038,2.86762557543062,2.00518806674155,0.566153061577665,2.83367491172426,3.50707029493574,1.97643888973262,3.53453448063988,2.6968616189571,2.84904965867608,1.30309567482861,0.659880491890142,1.32745138339963,4.12727081463468,7.25576536715402,5.46954731292105,2.95301892880773,2.45948118355142,3.10113951801865,5.08947221268508,6.41695281092498,1.8962205476149,2.10837217149998,1.03135543248187,2.7235168460303,4.50152735078276,4.78627129996192,5.14408884075822,7.80297028026004,3.56737635204141,5.26556865926787,3.65357938937519,3.05073220482823,2.33015277950202,1.54369878638473,1.15420377059036,2.26050197374268,3.79971427047382,1.07435109602823,1.31312719796049,10.2018292820448,5.7481843623258,2.22132145037209,3.09580301944834,2.59272338317596,3.01389531207506,2.87057878214153,2.51655990527175,2.37969801991397,4.47844647435706,3.17859939750175,4.77335309007557,3.47969592939249,3.86306987541013,4.10420295122845,4.80903080833278,3.9305261474312,4.98998081623837,5.78574190077352,10.4702376793612,6.48074866458964,6.83473244395618,1.69107881605257,3.43888055901151,3.97100377097034,3.11121901350476,3.35815541042101,2.87225413334323,3.87278887530988,3.3853140059427,1.99232754408851,1.20792060413003,2.01621004380506,6.00421129193539,4.45995473638361,6.36807934421929,8.96453678546786,5.37080087002444,6.15912199821921,6.37035882455835,6.05527061415767,6.15895344683701,5.33447646584999,5.84791873793675,3.99577311032985,3.75226182397285,2.92192255453922,6.80191150845634,0.221985953374065,1.88399098879899,2.3503846290971,0.772758376128762,0.750729901804728,0.915758121336325,0.214368379079066,0,7.90652579663893,5.9842280745933,5.15605962095457,4.29632955859219,2.74033007908257,7.55393897389701,6.07520250208625,2.70192721934532,4.53142408984205,4.14208249401456,3.94391920819871,2.39414924040619,3.24393850932855,4.61902762429759,3.98265008993166,7.35374033800057,10.0011027510727,9.88968274746692,6.73930340142812,7.07552192938633,8.61829619626815,8.11093267960128,9.64507526939789,8.9635213366817,7.98353018483024,10.9547548995107,10.5454736609819,10.2241886845764,9.89006161927936,9.27353196846703,12.0004238334895,9.40621772644489,9.77588378784016,9.44751708110135,10.1638130848557,7.86915853392591,9.51225458938417,8.41823076601097,9.64209208305619,8.97827634652382,8.77899134118889,7.68334962529395,8.18462086339379,8.2116525828562,7.71626443924566,1.99848462350357,4.91256377735358,7.09074478359384,10.3295699317175,6.61774257358547,7.65163857547391 | ||
|short_description=p2@Mrpl18 | |short_description=p2@Mrpl18 | ||
}} | }} |
Latest revision as of 23:20, 25 September 2015
Short description: | p2@Mrpl18 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Mrpl18_5end |
Coexpression cluster: | MCL_coexpression_mm9:79 |
Association with transcript: | 24bp_to_ENSMUST00000162978_5end |
EntrezGene: | Mrpl18 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 3.35e-12 | 31 |
mucosa | 5.21e-09 | 15 |
gastrointestinal system | 1.52e-08 | 47 |
intestinal mucosa | 4.94e-08 | 13 |
wall of intestine | 4.94e-08 | 13 |
gastrointestinal system mucosa | 4.94e-08 | 13 |
primary circulatory organ | 6.21e-07 | 18 |
heart | 6.21e-07 | 18 |
primitive heart tube | 6.21e-07 | 18 |
primary heart field | 6.21e-07 | 18 |
anterior lateral plate mesoderm | 6.21e-07 | 18 |
heart tube | 6.21e-07 | 18 |
heart primordium | 6.21e-07 | 18 |
cardiac mesoderm | 6.21e-07 | 18 |
cardiogenic plate | 6.21e-07 | 18 |
heart rudiment | 6.21e-07 | 18 |