FFCP PHASE1:Mm9::chr19:55292056..55292067,-: Difference between revisions
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{{FFCP|EntrezGene=73707|HGNC=|MCL_coexpression_id=56|UniProt=|association_with_transcript=-122bp_to_uc008hxn.1_5end|description=CAGE_peak_3_at_Gucy2g_5end|id=chr19:55292056..55292067,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000474!6.88e-11!9;UBERON:0005156!1.16e-10!26;UBERON:0000990!1.16e-10!26;UBERON:0003133!7.97e-10!24;UBERON:0003134!4.67e-09!8;UBERON:0003100!1.12e-08!11;UBERON:0001008!1.34e-08!17;UBERON:0004175!2.08e-08!9;UBERON:0006554!2.12e-07!16;UBERON:0003975!2.98e-07!5;UBERON:0002113!8.14e-07!14;UBERON:0003918!8.14e-07!14;UBERON:0005095!8.14e-07!14;UBERON:0007687!8.14e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0006554,4.16e-20,18;UBERON:0001008,4.22e-19,19;UBERON:0002113,8.69e-15,14;UBERON:0003918,8.69e-15,14;UBERON:0011143,8.69e-15,14;UBERON:0005095,8.69e-15,14;UBERON:0007687,8.69e-15,14;UBERON:0001987,2.42e-12,2;UBERON:0003124,2.42e-12,2;UBERON:0004340,2.42e-12,2;UBERON:0004175,8.07e-11,9;UBERON:0000489,3.62e-10,21;UBERON:0005631,1.13e-08,3;UBERON:0000478,1.13e-08,3;UBERON:0000158,1.13e-08,3;UBERON:0001301,1.34e-08,3;UBERON:0006555,1.34e-08,3;UBERON:0005103,1.34e-08,3;UBERON:0000083,1.34e-08,3;UBERON:0009201,1.34e-08,3;UBERON:0004819,1.34e-08,3;UBERON:0006553,1.34e-08,3;UBERON:0003074,1.34e-08,3;UBERON:0003060,1.34e-08,3;UBERON:0005795,8.08e-07,4;UBERON:0000995,8.08e-07,4;UBERON:0000080,9.17e-07,4;UBERON:0005904,9.17e-07,4;UBERON:0006947,9.17e-07,4;UBERON:0002120,9.17e-07,4;UBERON:0004054,9.17e-07,4;UBERON:0004875,9.17e-07,4;UBERON:0004876,9.17e-07,4;UBERON:0005721,9.17e-07,4;UBERON:0005754,9.17e-07,4;UBERON:0007297,9.17e-07,4|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0.433798070759735,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0.162241263067758,0,0.622034853050465,4.80173241023982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0.280543279561274,0.632365371242573,1.62371162777562,1.8839847340965,0.246794327843601,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0,0.162886959353576,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7230044402686,0,0,0,0,0.0603129249281559,0.358117032009409,0.164140899745061,0,0,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.496375471371293,0,0.129159823477731,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.563047426353546,0.73260649706906,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0|short_description=p3@Gucy2g}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=73707 | |||
|HGNC= | |||
|MCL_coexpression_id=56 | |||
|TSSclassifier=NA | |||
|UniProt= | |||
|association_with_transcript=-122bp_to_uc008hxn.1_5end | |||
|cluster_id=chr19:55292056..55292067,- | |||
|description=CAGE_peak_3_at_Gucy2g_5end | |||
|id=chr19:55292056..55292067,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000474!6.88e-11!9;UBERON:0005156!1.16e-10!26;UBERON:0000990!1.16e-10!26;UBERON:0003133!7.97e-10!24;UBERON:0003134!4.67e-09!8;UBERON:0003100!1.12e-08!11;UBERON:0001008!1.34e-08!17;UBERON:0004175!2.08e-08!9;UBERON:0006554!2.12e-07!16;UBERON:0003975!2.98e-07!5;UBERON:0002113!8.14e-07!14;UBERON:0003918!8.14e-07!14;UBERON:0005095!8.14e-07!14;UBERON:0007687!8.14e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006554,4.16e-20,18;UBERON:0001008,4.22e-19,19;UBERON:0002113,8.69e-15,14;UBERON:0003918,8.69e-15,14;UBERON:0011143,8.69e-15,14;UBERON:0005095,8.69e-15,14;UBERON:0007687,8.69e-15,14;UBERON:0001987,2.42e-12,2;UBERON:0003124,2.42e-12,2;UBERON:0004340,2.42e-12,2;UBERON:0004175,8.07e-11,9;UBERON:0000489,3.62e-10,21;UBERON:0005631,1.13e-08,3;UBERON:0000478,1.13e-08,3;UBERON:0000158,1.13e-08,3;UBERON:0001301,1.34e-08,3;UBERON:0006555,1.34e-08,3;UBERON:0005103,1.34e-08,3;UBERON:0000083,1.34e-08,3;UBERON:0009201,1.34e-08,3;UBERON:0004819,1.34e-08,3;UBERON:0006553,1.34e-08,3;UBERON:0003074,1.34e-08,3;UBERON:0003060,1.34e-08,3;UBERON:0005795,8.08e-07,4;UBERON:0000995,8.08e-07,4;UBERON:0000080,9.17e-07,4;UBERON:0005904,9.17e-07,4;UBERON:0006947,9.17e-07,4;UBERON:0002120,9.17e-07,4;UBERON:0004054,9.17e-07,4;UBERON:0004875,9.17e-07,4;UBERON:0004876,9.17e-07,4;UBERON:0005721,9.17e-07,4;UBERON:0005754,9.17e-07,4;UBERON:0007297,9.17e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0.433798070759735,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0.162241263067758,0,0.622034853050465,4.80173241023982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0,0,0.146199987425332,0.219550115291051,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0.280543279561274,0.632365371242573,1.62371162777562,1.8839847340965,0.246794327843601,0,0,0,0.224862112384854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0.345369963731791,0.144649058581512,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0.425820255624806,0,0.162886959353576,0.824850614862677,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7230044402686,0,0,0,0,0.0603129249281559,0.358117032009409,0.164140899745061,0,0,0,0.412773735926445,0.370389054739423,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0.149516546043979,0.496375471371293,0,0.129159823477731,0,0.234714477291508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0,0,0,0,0.19318959403219,0.563047426353546,0.73260649706906,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p3@Gucy2g | |||
}} |
Latest revision as of 23:43, 25 September 2015
Short description: | p3@Gucy2g |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gucy2g_5end |
Coexpression cluster: | MCL_coexpression_mm9:56 |
Association with transcript: | -122bp_to_uc008hxn.1_5end |
EntrezGene: | Gucy2g |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
urinary system structure | 4.16e-20 | 18 |
renal system | 4.22e-19 | 19 |
kidney | 8.69e-15 | 14 |
kidney mesenchyme | 8.69e-15 | 14 |
upper urinary tract | 8.69e-15 | 14 |
kidney rudiment | 8.69e-15 | 14 |
kidney field | 8.69e-15 | 14 |
placenta | 2.42e-12 | 2 |
chorion | 2.42e-12 | 2 |
allantois | 2.42e-12 | 2 |
internal genitalia | 8.07e-11 | 9 |
cavitated compound organ | 3.62e-10 | 21 |
extraembryonic membrane | 1.13e-08 | 3 |
extraembryonic structure | 1.13e-08 | 3 |
membranous layer | 1.13e-08 | 3 |
epididymis | 1.34e-08 | 3 |
excretory tube | 1.34e-08 | 3 |
mesonephric epithelium | 1.34e-08 | 3 |
mesonephric tubule | 1.34e-08 | 3 |
nephric duct | 1.34e-08 | 3 |
kidney epithelium | 1.34e-08 | 3 |
renal duct | 1.34e-08 | 3 |
mesonephric duct | 1.34e-08 | 3 |
pronephric duct | 1.34e-08 | 3 |
embryonic uterus | 8.08e-07 | 4 |
uterus | 8.08e-07 | 4 |
mesonephros | 9.17e-07 | 4 |
duct of male reproductive system | 9.17e-07 | 4 |
male genital duct | 9.17e-07 | 4 |
pronephros | 9.17e-07 | 4 |
internal male genitalia | 9.17e-07 | 4 |
nephrogenic cord | 9.17e-07 | 4 |
urogenital ridge | 9.17e-07 | 4 |
pronephric mesoderm | 9.17e-07 | 4 |
rostral part of nephrogenic cord | 9.17e-07 | 4 |
presumptive pronephric mesoderm | 9.17e-07 | 4 |