FFCP PHASE1:Mm9::chr3:96633382..96633397,+: Difference between revisions
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|id=chr3:96633382..96633397,+
|short_description=p5@Pdzk1
|description=CAGE_peak_5_at_Pdzk1_5end
|association_with_transcript=0bp_to_ENSMUST00000138014_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=59020 | |EntrezGene=59020 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=9 | |||
|TSSclassifier=NA | |||
|UniProt=D3YZS9 | |UniProt=D3YZS9 | ||
|association_with_transcript=0bp_to_ENSMUST00000138014_5end | |||
|cluster_id=chr3:96633382..96633397,+ | |||
|description=CAGE_peak_5_at_Pdzk1_5end | |||
|id=chr3:96633382..96633397,+ | |||
|ontology_enrichment_celltype=CL:0000239!3.33e-08!6;CL:0000677!3.33e-08!6;CL:0000212!3.33e-08!6;CL:0000584!3.33e-08!6;CL:0000075!7.78e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.04e-15,6;CL:0000677,1.04e-15,6;CL:0000584,1.04e-15,6;CL:0000075,2.29e-13,7;CL:0002563,3.05e-10,9;CL:0002251,3.05e-10,9;CL:0000682,3.99e-09,3;CL:0000066,2.71e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.54e-12!43;UBERON:0000344!4.82e-11!15;UBERON:0004923!1.97e-09!24;UBERON:0001242!6.65e-09!13;UBERON:0000060!6.65e-09!13;UBERON:0001262!6.65e-09!13;UBERON:0004786!6.65e-09!13;UBERON:0005409!1.19e-07!59;UBERON:0006554!1.26e-07!16;UBERON:0001008!5.37e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.03e-36,31;UBERON:0000344,2.54e-23,15;UBERON:0005409,6.16e-22,47;UBERON:0004923,7.56e-22,24;UBERON:0001242,1.12e-18,13;UBERON:0001262,1.12e-18,13;UBERON:0004786,1.12e-18,13;UBERON:0002108,5.84e-11,4;UBERON:0004119,2.34e-10,118;UBERON:0000925,2.34e-10,118;UBERON:0006595,2.34e-10,118;UBERON:0003350,3.05e-10,9;UBERON:0004808,3.05e-10,9;UBERON:0001277,3.05e-10,9;UBERON:0000331,1.12e-08,3;UBERON:0002116,1.12e-08,3;UBERON:0001204,1.12e-08,3;UBERON:0001168,1.12e-08,3;UBERON:0001007,1.27e-08,116;UBERON:0001555,1.27e-08,116;UBERON:0007026,1.27e-08,116;UBERON:0005631,1.34e-08,3;UBERON:0000478,1.34e-08,3;UBERON:0000158,1.34e-08,3;UBERON:0000485,2.98e-08,11;UBERON:0004921,5.52e-07,114 | |||
|phase1_expression=0,16.7508195666893,16.8349718574128,4.83942738090928,11.0197060588196,1.84667199103079,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,7.03966660290989,9.63518980482114,16.6527269593356,5.59990595006797,10.9890328669803,7.41091335879858,10.5852654499171,3.32595765982957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,12.1125534189843,0,0,0,0,0,0,0,0,9.96282515313506,0,0,0,0,0,0,0,0,0,0,0.407357455401265,15.1776504144313,75.0586592548014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,3.70230793328962,0,0,0,0.403367049246685,0.667134131534611,3.23383564391351,5.21981967698963,4.77626968699632,1.25667604400135,2.18852119245266,1.55971269695296,3.59527763461689,7.3486936957396,5.77509692437665,0,0,0,0.203651327845314,0.193952487167626,0.701358198903186,0.316182685621286,0.442830443938806,1.09899109488962,1.1105744752962,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.488660878060728,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,1.40803024838226,7.62595455109753,1.98475558249466,0.65954501176592,0,0.241251699712623,0.358117032009409,0.984845398470368,5.24665505933731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.443971906748129,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0.476293691283074,0.231768651889711,0,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0.25384382367503,0,0,0,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.464810523557898,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | |phase1_expression=0,16.7508195666893,16.8349718574128,4.83942738090928,11.0197060588196,1.84667199103079,1.40167584357315,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,7.03966660290989,9.63518980482114,16.6527269593356,5.59990595006797,10.9890328669803,7.41091335879858,10.5852654499171,3.32595765982957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.91347103775248,0,0,0,0,0,0,0,0,12.1125534189843,0,0,0,0,0,0,0,0,9.96282515313506,0,0,0,0,0,0,0,0,0,0,0.407357455401265,15.1776504144313,75.0586592548014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,3.70230793328962,0,0,0,0.403367049246685,0.667134131534611,3.23383564391351,5.21981967698963,4.77626968699632,1.25667604400135,2.18852119245266,1.55971269695296,3.59527763461689,7.3486936957396,5.77509692437665,0,0,0,0.203651327845314,0.193952487167626,0.701358198903186,0.316182685621286,0.442830443938806,1.09899109488962,1.1105744752962,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0.488660878060728,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,1.40803024838226,7.62595455109753,1.98475558249466,0.65954501176592,0,0.241251699712623,0.358117032009409,0.984845398470368,5.24665505933731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0.100826185136841,0,0,0,0,0.443971906748129,0,0,0.19318959403219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0.252697211763798,0.25347929989024,0,0.0936415074698824,0.0640251524048693,0.17230640686684,0.476293691283074,0.231768651889711,0,0,0.294397840268795,0,0.177475806159338,0.238436189947321,0.290692833264657,0.188218760830661,0.25384382367503,0,0,0,0,0.237270036248348,0.0985044823755635,0.409231043169689,0.464810523557898,0,0.249810577937946,0.233931608445408,0.214871054048298,0,0.220591419119515,0 | ||
|short_description=p5@Pdzk1 | |||
}} | }} |
Latest revision as of 00:47, 26 September 2015
Short description: | p5@Pdzk1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Pdzk1_5end |
Coexpression cluster: | MCL_coexpression_mm9:9 |
Association with transcript: | 0bp_to_ENSMUST00000138014_5end |
EntrezGene: | Pdzk1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.04e-15 | 6 |
gut absorptive cell | 1.04e-15 | 6 |
enterocyte | 1.04e-15 | 6 |
columnar/cuboidal epithelial cell | 2.29e-13 | 7 |
intestinal epithelial cell | 3.05e-10 | 9 |
epithelial cell of alimentary canal | 3.05e-10 | 9 |
M cell of gut | 3.99e-09 | 3 |
epithelial cell | 2.71e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.03e-36 | 31 |
mucosa | 2.54e-23 | 15 |
gastrointestinal system | 6.16e-22 | 47 |
organ component layer | 7.56e-22 | 24 |
intestinal mucosa | 1.12e-18 | 13 |
wall of intestine | 1.12e-18 | 13 |
gastrointestinal system mucosa | 1.12e-18 | 13 |
small intestine | 5.84e-11 | 4 |
endoderm-derived structure | 2.34e-10 | 118 |
endoderm | 2.34e-10 | 118 |
presumptive endoderm | 2.34e-10 | 118 |
epithelium of mucosa | 3.05e-10 | 9 |
gastrointestinal system epithelium | 3.05e-10 | 9 |
intestinal epithelium | 3.05e-10 | 9 |
ileal mucosa | 1.12e-08 | 3 |
ileum | 1.12e-08 | 3 |
mucosa of small intestine | 1.12e-08 | 3 |
wall of small intestine | 1.12e-08 | 3 |
digestive system | 1.27e-08 | 116 |
digestive tract | 1.27e-08 | 116 |
primitive gut | 1.27e-08 | 116 |
extraembryonic membrane | 1.34e-08 | 3 |
extraembryonic structure | 1.34e-08 | 3 |
membranous layer | 1.34e-08 | 3 |
simple columnar epithelium | 2.98e-08 | 11 |
subdivision of digestive tract | 5.52e-07 | 114 |