FFCP PHASE1:Mm9::chr7:13909919..13909935,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=232889|HGNC=|MCL_coexpression_id=124|UniProt=Q08EC7|association_with_transcript=-68bp_to_ENSMUST00000167232_5end|description=CAGE_peak_2_at_Pla2g4c_5end|id=chr7:13909919..13909935,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002027,8.84e-16,3;CL:0002006,8.84e-16,3;CL:0002024,8.84e-16,3;CL:0000553,3.96e-08,6;CL:0000556,3.96e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000945!1.07e-11!16;UBERON:0010039!1.07e-11!16;UBERON:0002106!2.18e-09!6;UBERON:0004457!2.18e-09!6;UBERON:0000042!2.18e-09!6;UBERON:0004854!2.18e-09!6;UBERON:0009034!2.18e-09!6;UBERON:0002095!2.18e-09!6;UBERON:0004782!2.18e-09!6;UBERON:0003281!2.18e-09!6;UBERON:0009664!2.18e-09!6;UBERON:0002296!2.18e-09!6;UBERON:0005602!2.18e-09!6;UBERON:0001179!2.18e-09!6;UBERON:0006293!2.18e-09!6;UBERON:0003887!9.53e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0000945,8.25e-14,16;UBERON:0010039,8.25e-14,16;UBERON:0002106,3.57e-13,6;UBERON:0004457,3.57e-13,6;UBERON:0000042,3.57e-13,6;UBERON:0004854,3.57e-13,6;UBERON:0009034,3.57e-13,6;UBERON:0002095,3.57e-13,6;UBERON:0004782,3.57e-13,6;UBERON:0003281,3.57e-13,6;UBERON:0009664,3.57e-13,6;UBERON:0002296,3.57e-13,6;UBERON:0005602,3.57e-13,6;UBERON:0001179,3.57e-13,6;UBERON:0006293,3.57e-13,6;UBERON:0003887,5.84e-08,10;UBERON:0004923,9.46e-07,24|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,2.99798785634096,5.4668322195253,26.5833513688696,0,0.137114433605739,0,0,0,0,0.95995453676044,2.52350209173887,0,0,0,1.52018735565099,0.756090389279792,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0.647067399789637,1.32504911076236,0.969750506270444,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0.202860121388503,0.72353147925725,0.763877555344259,1.15078454980324,2.7562988551756,0.549122826376163,0,1.11642284300551,0.312037673114561,0,0,0,0,0,0.162964976442026,0,0,0.837531287209079,2.61848004974615,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328281799490123,0,0,2.05045056957423,0.412773735926445,0.925972636848558,3.95573759709851,5.05768642567793,2.0590035588587,0,0,0,2.86401185404534,0,0,0,0.836353184057875,0.655087691238533,0.674321731924103,1.23980183588004,1.04702376793612,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,1.0174249164263,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0,0.429742108096597,0,0,1.15933917810211|short_description=p2@Pla2g4c}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=232889 | |||
|HGNC= | |||
|MCL_coexpression_id=124 | |||
|TSSclassifier=NA | |||
|UniProt=Q08EC7 | |||
|association_with_transcript=-68bp_to_ENSMUST00000167232_5end | |||
|cluster_id=chr7:13909919..13909935,+ | |||
|description=CAGE_peak_2_at_Pla2g4c_5end | |||
|id=chr7:13909919..13909935,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002027,8.84e-16,3;CL:0002006,8.84e-16,3;CL:0002024,8.84e-16,3;CL:0000553,3.96e-08,6;CL:0000556,3.96e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000945!1.07e-11!16;UBERON:0010039!1.07e-11!16;UBERON:0002106!2.18e-09!6;UBERON:0004457!2.18e-09!6;UBERON:0000042!2.18e-09!6;UBERON:0004854!2.18e-09!6;UBERON:0009034!2.18e-09!6;UBERON:0002095!2.18e-09!6;UBERON:0004782!2.18e-09!6;UBERON:0003281!2.18e-09!6;UBERON:0009664!2.18e-09!6;UBERON:0002296!2.18e-09!6;UBERON:0005602!2.18e-09!6;UBERON:0001179!2.18e-09!6;UBERON:0006293!2.18e-09!6;UBERON:0003887!9.53e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000945,8.25e-14,16;UBERON:0010039,8.25e-14,16;UBERON:0002106,3.57e-13,6;UBERON:0004457,3.57e-13,6;UBERON:0000042,3.57e-13,6;UBERON:0004854,3.57e-13,6;UBERON:0009034,3.57e-13,6;UBERON:0002095,3.57e-13,6;UBERON:0004782,3.57e-13,6;UBERON:0003281,3.57e-13,6;UBERON:0009664,3.57e-13,6;UBERON:0002296,3.57e-13,6;UBERON:0005602,3.57e-13,6;UBERON:0001179,3.57e-13,6;UBERON:0006293,3.57e-13,6;UBERON:0003887,5.84e-08,10;UBERON:0004923,9.46e-07,24 | |||
|phase1_expression=0,0,0.454999239389536,0,0,0,0,0,0,0,0,0,0,0,2.99798785634096,5.4668322195253,26.5833513688696,0,0.137114433605739,0,0,0,0,0.95995453676044,2.52350209173887,0,0,0,1.52018735565099,0.756090389279792,0.443461021310609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.842666520790511,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0.647067399789637,1.32504911076236,0.969750506270444,0,0,0,0.510914110417183,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0.411564272815887,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216138049874694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224862112384854,0.202860121388503,0.72353147925725,0.763877555344259,1.15078454980324,2.7562988551756,0.549122826376163,0,1.11642284300551,0.312037673114561,0,0,0,0,0,0.162964976442026,0,0,0.837531287209079,2.61848004974615,0,0.157635144106191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0.488660878060728,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.328281799490123,0,0,2.05045056957423,0.412773735926445,0.925972636848558,3.95573759709851,5.05768642567793,2.0590035588587,0,0,0,2.86401185404534,0,0,0,0.836353184057875,0.655087691238533,0.674321731924103,1.23980183588004,1.04702376793612,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.209613162627982,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0.377252682772152,0.0936415074698824,0.256100609619477,0.114870937911227,0,0.115884325944855,0,0.412085900803307,0.147198920134397,0,0,0.238436189947321,1.0174249164263,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.0985044823755635,0,0,0.192906610981141,0,0,0.429742108096597,0,0,1.15933917810211 | |||
|short_description=p2@Pla2g4c | |||
}} |
Latest revision as of 00:55, 26 September 2015
Short description: | p2@Pla2g4c |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Pla2g4c_5end |
Coexpression cluster: | MCL_coexpression_mm9:124 |
Association with transcript: | -68bp_to_ENSMUST00000167232_5end |
EntrezGene: | Pla2g4c |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD9-positive, CD41-positive megakaryocyte cell | 8.84e-16 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 8.84e-16 | 3 |
Kit-positive megakaryocyte progenitor cell | 8.84e-16 | 3 |
megakaryocyte progenitor cell | 3.96e-08 | 6 |
megakaryocyte | 3.96e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
stomach | 8.25e-14 | 16 |
food storage organ | 8.25e-14 | 16 |
spleen | 3.57e-13 | 6 |
cavity lining | 3.57e-13 | 6 |
serous membrane | 3.57e-13 | 6 |
gastrointestinal system mesentery | 3.57e-13 | 6 |
stomach region | 3.57e-13 | 6 |
mesentery | 3.57e-13 | 6 |
gastrointestinal system serosa | 3.57e-13 | 6 |
mesentery of stomach | 3.57e-13 | 6 |
gut mesentery | 3.57e-13 | 6 |
dorsal mesentery | 3.57e-13 | 6 |
dorsal mesogastrium | 3.57e-13 | 6 |
peritoneal cavity | 3.57e-13 | 6 |
spleen primordium | 3.57e-13 | 6 |
intraembryonic coelom | 5.84e-08 | 10 |
organ component layer | 9.46e-07 | 24 |