FFCP PHASE1:Mm9::chr7:142720270..142720279,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=212070 | |EntrezGene=212070 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BHH8 | |UniProt=Q8BHH8 | ||
|association_with_transcript=57bp_to_ENSMUST00000053716,NM_178669,uc009ked.1_5end | |association_with_transcript=57bp_to_ENSMUST00000053716,NM_178669,uc009ked.1_5end | ||
|cluster_id=chr7:142720270..142720279,- | |||
|description=CAGE_peak_3_at_Clrn3_5end | |description=CAGE_peak_3_at_Clrn3_5end | ||
|id=chr7:142720270..142720279,- | |id=chr7:142720270..142720279,- | ||
|ontology_enrichment_celltype=CL:0002563!1.86e-10!9;CL:0002251!1.86e-10!9;CL:0000239!1.37e-07!6;CL:0000677!1.37e-07!6;CL:0000212!1.37e-07!6;CL:0000584!1.37e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.19e-17,9;CL:0002251,8.19e-17,9;CL:0000239,6.63e-12,6;CL:0000677,6.63e-12,6;CL:0000584,6.63e-12,6;CL:0000075,4.17e-10,7;CL:0000066,1.22e-09,25;CL:0002076,2.01e-09,15;CL:0000682,1.03e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!2.09e-24!43;UBERON:0005409!1.39e-18!59;UBERON:0000344!3.29e-18!15;UBERON:0001242!1.06e-15!13;UBERON:0000060!1.06e-15!13;UBERON:0001262!1.06e-15!13;UBERON:0004786!1.06e-15!13;UBERON:0004923!1.85e-13!24;UBERON:0003350!1.86e-10!9;UBERON:0004808!1.86e-10!9;UBERON:0001277!1.86e-10!9;UBERON:0000485!4.00e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,5.11e-54,31;UBERON:0005409,5.84e-36,47;UBERON:0000344,3.82e-30,15;UBERON:0001242,7.98e-26,13;UBERON:0001262,7.98e-26,13;UBERON:0004786,7.98e-26,13;UBERON:0004923,1.97e-17,24;UBERON:0003350,8.19e-17,9;UBERON:0004808,8.19e-17,9;UBERON:0001277,8.19e-17,9;UBERON:0000485,1.88e-13,11;UBERON:0001007,1.89e-12,116;UBERON:0001555,1.89e-12,116;UBERON:0007026,1.89e-12,116;UBERON:0004119,4.13e-12,118;UBERON:0000925,4.13e-12,118;UBERON:0006595,4.13e-12,118;UBERON:0004921,1.46e-10,114;UBERON:0002108,1.91e-10,4;UBERON:0000331,2.39e-08,3;UBERON:0002116,2.39e-08,3;UBERON:0001204,2.39e-08,3;UBERON:0001168,2.39e-08,3 | |||
|phase1_expression=0,5.23463111459042,4.54999239389536,5.14189159221611,6.51164448930251,2.35030980676646,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,7.99962113967033,10.0940083669555,9.76194338995534,9.04600191934057,6.89507944594845,17.4821545899864,19.1542898617547,10.6430645114546,0,0,0,2.88851619751275,3.32469290716985,3.26670970019791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,2.96878087269556,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,7.45567044872489,0,0,10.7291963187608,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8688452342709,7.40461586657924,0.213288250535234,0.464473343720877,2.96395161040815,4.03367049246685,4.89231696458715,6.84812254005213,6.64340686162316,7.41145296258049,5.02670417600539,7.36138946552258,4.09424582950152,3.59527763461689,7.99710784536369,10.5544874824815,0.569003702859245,0.913988100877831,0,0.814605311381257,0.387904974335251,1.61312385747733,1.26473074248515,1.32849133181642,1.41298855057237,2.09775178667061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,9.61886760878507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540026704109006,0,0.436725127492355,0,0,0,7.90651337079936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0.206035057238894,0.320919209591815,0.758091635291392,0.50695859978048,0,0.0936415074698824,0.320125762024346,0.402048282689293,0,0.115884325944855,0.192909220463705,0.412085900803307,0.441596760403192,1.02860775715625,0.177475806159338,0.476872379894642,0.290692833264657,0.470546902076653,0.423073039458382,0,0,0.271608227691724,0,0.474540072496697,0.29551344712669,0.409231043169689,0.309873682371932,0.192906610981141,0,0.935726433781634,0.429742108096597,0,0,0 | |phase1_expression=0,5.23463111459042,4.54999239389536,5.14189159221611,6.51164448930251,2.35030980676646,2.10251376535973,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340173160604279,0,0,7.99962113967033,10.0940083669555,9.76194338995534,9.04600191934057,6.89507944594845,17.4821545899864,19.1542898617547,10.6430645114546,0,0,0,2.88851619751275,3.32469290716985,3.26670970019791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,2.96878087269556,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,7.45567044872489,0,0,10.7291963187608,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.8688452342709,7.40461586657924,0.213288250535234,0.464473343720877,2.96395161040815,4.03367049246685,4.89231696458715,6.84812254005213,6.64340686162316,7.41145296258049,5.02670417600539,7.36138946552258,4.09424582950152,3.59527763461689,7.99710784536369,10.5544874824815,0.569003702859245,0.913988100877831,0,0.814605311381257,0.387904974335251,1.61312385747733,1.26473074248515,1.32849133181642,1.41298855057237,2.09775178667061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29214146584111,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0.21183207086382,0,0,0,0,0,0,9.61886760878507,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540026704109006,0,0.436725127492355,0,0,0,7.90651337079936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486213434136588,0,0,0,0.206035057238894,0.320919209591815,0.758091635291392,0.50695859978048,0,0.0936415074698824,0.320125762024346,0.402048282689293,0,0.115884325944855,0.192909220463705,0.412085900803307,0.441596760403192,1.02860775715625,0.177475806159338,0.476872379894642,0.290692833264657,0.470546902076653,0.423073039458382,0,0,0.271608227691724,0,0.474540072496697,0.29551344712669,0.409231043169689,0.309873682371932,0.192906610981141,0,0.935726433781634,0.429742108096597,0,0,0 | ||
|short_description=p3@Clrn3 | |short_description=p3@Clrn3 | ||
}} | }} |
Latest revision as of 01:35, 26 September 2015
Short description: | p3@Clrn3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Clrn3_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 57bp_to_ENSMUST00000053716, NM_178669, uc009ked.1_5end |
EntrezGene: | Clrn3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.19e-17 | 9 |
epithelial cell of alimentary canal | 8.19e-17 | 9 |
brush border epithelial cell | 6.63e-12 | 6 |
gut absorptive cell | 6.63e-12 | 6 |
enterocyte | 6.63e-12 | 6 |
columnar/cuboidal epithelial cell | 4.17e-10 | 7 |
epithelial cell | 1.22e-09 | 25 |
endo-epithelial cell | 2.01e-09 | 15 |
M cell of gut | 1.03e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 5.11e-54 | 31 |
gastrointestinal system | 5.84e-36 | 47 |
mucosa | 3.82e-30 | 15 |
intestinal mucosa | 7.98e-26 | 13 |
wall of intestine | 7.98e-26 | 13 |
gastrointestinal system mucosa | 7.98e-26 | 13 |
organ component layer | 1.97e-17 | 24 |
epithelium of mucosa | 8.19e-17 | 9 |
gastrointestinal system epithelium | 8.19e-17 | 9 |
intestinal epithelium | 8.19e-17 | 9 |
simple columnar epithelium | 1.88e-13 | 11 |
digestive system | 1.89e-12 | 116 |
digestive tract | 1.89e-12 | 116 |
primitive gut | 1.89e-12 | 116 |
endoderm-derived structure | 4.13e-12 | 118 |
endoderm | 4.13e-12 | 118 |
presumptive endoderm | 4.13e-12 | 118 |
subdivision of digestive tract | 1.46e-10 | 114 |
small intestine | 1.91e-10 | 4 |
ileal mucosa | 2.39e-08 | 3 |
ileum | 2.39e-08 | 3 |
mucosa of small intestine | 2.39e-08 | 3 |
wall of small intestine | 2.39e-08 | 3 |