FFCP PHASE1:Mm9::chr7:142720328..142720344,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=212070 | |EntrezGene=212070 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BHH8 | |UniProt=Q8BHH8 | ||
|association_with_transcript=0bp_to_ENSMUST00000053716,NM_178669,uc009ked.1_5end | |association_with_transcript=0bp_to_ENSMUST00000053716,NM_178669,uc009ked.1_5end | ||
|cluster_id=chr7:142720328..142720344,- | |||
|description=CAGE_peak_1_at_Clrn3_5end | |description=CAGE_peak_1_at_Clrn3_5end | ||
|id=chr7:142720328..142720344,- | |id=chr7:142720328..142720344,- | ||
|ontology_enrichment_celltype=CL:0002563!9.12e-08!9;CL:0002251!9.12e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.41e-09,9;CL:0002251,3.41e-09,9;CL:0000239,6.75e-07,6;CL:0000677,6.75e-07,6;CL:0000584,6.75e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.54e-20!43;UBERON:0005409!2.43e-18!59;UBERON:0000344!1.77e-13!15;UBERON:0001242!1.45e-11!13;UBERON:0000060!1.45e-11!13;UBERON:0001262!1.45e-11!13;UBERON:0004786!1.45e-11!13;UBERON:0004923!2.76e-09!24;UBERON:0002113!8.92e-08!14;UBERON:0003918!8.92e-08!14;UBERON:0005095!8.92e-08!14;UBERON:0007687!8.92e-08!14;UBERON:0003350!9.12e-08!9;UBERON:0004808!9.12e-08!9;UBERON:0001277!9.12e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.01e-31,31;UBERON:0005409,6.43e-25,47;UBERON:0000344,3.27e-16,15;UBERON:0001242,7.33e-14,13;UBERON:0001262,7.33e-14,13;UBERON:0004786,7.33e-14,13;UBERON:0004923,8.42e-12,24;UBERON:0003350,3.41e-09,9;UBERON:0004808,3.41e-09,9;UBERON:0001277,3.41e-09,9;UBERON:0002113,3.64e-08,14;UBERON:0003918,3.64e-08,14;UBERON:0011143,3.64e-08,14;UBERON:0005095,3.64e-08,14;UBERON:0007687,3.64e-08,14;UBERON:0006554,1.27e-07,18;UBERON:0000485,4.48e-07,11;UBERON:0001008,4.97e-07,19 | |||
|phase1_expression=0,107.135450145284,102.374828862646,50.2090590769338,72.128985112274,39.7873874431179,46.2553028379141,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5864069423583,0,0,136.153551797189,141.08670785631,109.104073181854,112.859642993678,111.398627298605,144.797845625757,142.397023314361,125.942930052213,0,0,0,36.9730073281631,33.413163717057,27.7670324516822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0275529540974,0,0,0,0,0,0,0,0,0,0,41.2203805785807,0,0,0,0.304465478312141,0.691846491768175,0.150722640552623,0,0,57.5964274821091,0,0,0.161766849947409,0,0,119.290727179598,0,0,136.414067481388,0,0,0,0,0,0,0,0,0,0,2.03678727700633,0.995255764880744,1.51633655060205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19420560091096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,406.745521853055,134.340887865081,1.91959425481711,6.50262681209228,20.747661272857,47.5973118111088,60.7092059696496,88.45491614234,133.817195355552,118.583247401288,83.1919541128892,96.0959759958758,79.3503834574819,105.161870812544,109.149715186721,135.017783266461,3.79335801906163,6.05517116831563,14.6520056375005,31.3623044881784,38.4025924591899,42.9932575927653,61.2762044734053,89.4517496756389,92.7862481542525,87.4885892205566,0,0,0.196558995113203,0,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.534196811001766,1.30309567482861,0,0,0,0.906970670894253,0,0.295301892880773,0.307435147943927,18.0899805217755,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,1.17335854031855,4.2366414172764,0,0,0,0,0,0.164140899745061,119.215662181609,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.813277868507395,7.99239522081329,1.25452977608681,6.76923947613151,1.34864346384821,1.40510874733071,0,105.376973286228,0,0,0,0,0,0.387479470433193,0,0.352071715937262,0.2604087696879,0,0,0,0.632022241256357,0,0,0,0.179026695667481,0,0.360586348559907,0.147689527174577,0.302899349844443,0,0.403304740547362,0.974578807397524,0.384847366561318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,1.45864030240976,0.209613162627982,0.735374033800057,3.11145418922261,2.88449080134452,3.20919209591815,5.81203587056734,2.5347929989024,3.9611531691076,5.3375659257833,3.90553429669703,3.9056118889817,3.81034953026459,3.82418275618023,2.50781986602817,4.53294490883637,4.12156976376312,3.42869252385415,5.14679837862079,4.76872379894642,4.79643174886684,3.67026583619789,3.63842813934209,3.47563148458268,6.31367307450823,4.48153575691344,2.24456908663095,4.74540072496697,3.25064791839359,4.91077251803627,4.33823155320705,3.66522560864169,0,5.6143586026898,9.45432637812513,0.191288332068843,0,0.463735671240843 | |phase1_expression=0,107.135450145284,102.374828862646,50.2090590769338,72.128985112274,39.7873874431179,46.2553028379141,0,0,0,0,0,0,0,0,0,0,0,0,0,12.5864069423583,0,0,136.153551797189,141.08670785631,109.104073181854,112.859642993678,111.398627298605,144.797845625757,142.397023314361,125.942930052213,0,0,0,36.9730073281631,33.413163717057,27.7670324516822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.0275529540974,0,0,0,0,0,0,0,0,0,0,41.2203805785807,0,0,0,0.304465478312141,0.691846491768175,0.150722640552623,0,0,57.5964274821091,0,0,0.161766849947409,0,0,119.290727179598,0,0,136.414067481388,0,0,0,0,0,0,0,0,0,0,2.03678727700633,0.995255764880744,1.51633655060205,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19420560091096,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,406.745521853055,134.340887865081,1.91959425481711,6.50262681209228,20.747661272857,47.5973118111088,60.7092059696496,88.45491614234,133.817195355552,118.583247401288,83.1919541128892,96.0959759958758,79.3503834574819,105.161870812544,109.149715186721,135.017783266461,3.79335801906163,6.05517116831563,14.6520056375005,31.3623044881784,38.4025924591899,42.9932575927653,61.2762044734053,89.4517496756389,92.7862481542525,87.4885892205566,0,0,0.196558995113203,0,0,0,0.50925170356284,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.534196811001766,1.30309567482861,0,0,0,0.906970670894253,0,0.295301892880773,0.307435147943927,18.0899805217755,0,0,0.316036757935816,0,0,0,0,0,0,0,0,0,0,1.17335854031855,4.2366414172764,0,0,0,0,0,0.164140899745061,119.215662181609,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.813277868507395,7.99239522081329,1.25452977608681,6.76923947613151,1.34864346384821,1.40510874733071,0,105.376973286228,0,0,0,0,0,0.387479470433193,0,0.352071715937262,0.2604087696879,0,0,0,0.632022241256357,0,0,0,0.179026695667481,0,0.360586348559907,0.147689527174577,0.302899349844443,0,0.403304740547362,0.974578807397524,0.384847366561318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,1.45864030240976,0.209613162627982,0.735374033800057,3.11145418922261,2.88449080134452,3.20919209591815,5.81203587056734,2.5347929989024,3.9611531691076,5.3375659257833,3.90553429669703,3.9056118889817,3.81034953026459,3.82418275618023,2.50781986602817,4.53294490883637,4.12156976376312,3.42869252385415,5.14679837862079,4.76872379894642,4.79643174886684,3.67026583619789,3.63842813934209,3.47563148458268,6.31367307450823,4.48153575691344,2.24456908663095,4.74540072496697,3.25064791839359,4.91077251803627,4.33823155320705,3.66522560864169,0,5.6143586026898,9.45432637812513,0.191288332068843,0,0.463735671240843 | ||
|short_description=p1@Clrn3 | |short_description=p1@Clrn3 | ||
}} | }} |
Latest revision as of 01:36, 26 September 2015
Short description: | p1@Clrn3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Clrn3_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000053716, NM_178669, uc009ked.1_5end |
EntrezGene: | Clrn3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.41e-09 | 9 |
epithelial cell of alimentary canal | 3.41e-09 | 9 |
brush border epithelial cell | 6.75e-07 | 6 |
gut absorptive cell | 6.75e-07 | 6 |
enterocyte | 6.75e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.01e-31 | 31 |
gastrointestinal system | 6.43e-25 | 47 |
mucosa | 3.27e-16 | 15 |
intestinal mucosa | 7.33e-14 | 13 |
wall of intestine | 7.33e-14 | 13 |
gastrointestinal system mucosa | 7.33e-14 | 13 |
organ component layer | 8.42e-12 | 24 |
epithelium of mucosa | 3.41e-09 | 9 |
gastrointestinal system epithelium | 3.41e-09 | 9 |
intestinal epithelium | 3.41e-09 | 9 |
kidney | 3.64e-08 | 14 |
kidney mesenchyme | 3.64e-08 | 14 |
upper urinary tract | 3.64e-08 | 14 |
kidney rudiment | 3.64e-08 | 14 |
kidney field | 3.64e-08 | 14 |
urinary system structure | 1.27e-07 | 18 |
simple columnar epithelium | 4.48e-07 | 11 |
renal system | 4.97e-07 | 19 |