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FFCP PHASE1:Mm9::chr9:103124410..103124479,-: Difference between revisions

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{{FFCP|EntrezGene=22041|HGNC=|MCL_coexpression_id=5|UniProt=F7BAE9|association_with_transcript=-17bp_to_ENSMUST00000170904_5end|description=CAGE_peak_2_at_Trf_5end|id=chr9:103124410..103124479,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!9.95e-17!25;UBERON:0002330!9.95e-17!25;UBERON:0002107!2.83e-15!22;UBERON:0007499!2.83e-15!22;UBERON:0006925!2.83e-15!22;UBERON:0009497!2.83e-15!22;UBERON:0000015!2.83e-15!22;UBERON:0002423!2.83e-15!22;UBERON:0006235!2.83e-15!22;UBERON:0008835!2.83e-15!22;UBERON:0003894!2.83e-15!22;UBERON:0004161!2.83e-15!22;UBERON:0008836!2.83e-15!22;UBERON:0009854!5.02e-14!23;UBERON:0009856!5.02e-14!23;UBERON:0005172!2.58e-12!49;UBERON:0005173!2.58e-12!49;UBERON:0002417!2.58e-12!49;UBERON:0000916!2.58e-12!49;UBERON:0009569!1.34e-10!66;UBERON:0005177!9.77e-10!85;UBERON:0005256!1.20e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002365,6.16e-24,25;UBERON:0002330,6.16e-24,25;UBERON:0002107,6.47e-23,22;UBERON:0007499,6.47e-23,22;UBERON:0006925,6.47e-23,22;UBERON:0009497,6.47e-23,22;UBERON:0000015,6.47e-23,22;UBERON:0002423,6.47e-23,22;UBERON:0006235,6.47e-23,22;UBERON:0008835,6.47e-23,22;UBERON:0003894,6.47e-23,22;UBERON:0004161,6.47e-23,22;UBERON:0008836,6.47e-23,22;UBERON:0009854,1.41e-21,23;UBERON:0009856,1.41e-21,23;UBERON:0005256,7.36e-13,45;UBERON:0005172,4.30e-11,49;UBERON:0005173,4.30e-11,49;UBERON:0002417,4.30e-11,49;UBERON:0000916,4.30e-11,49;UBERON:0009569,5.87e-08,66;UBERON:0003104,5.98e-08,61;UBERON:0009142,5.98e-08,61;UBERON:0003914,1.35e-07,47;UBERON:0002530,6.07e-07,65|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0.157731082679119,0,0,0.17008658030214,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7997994345628,3.9554654502679,2.1314403448383,0,1.15265491596466,0.103689612308478,0.135005938331691,0,1.14260393761521,0.220868540951614,0,0.0958454710182364,0,0,0.893811366596314,2.15049146558741,0,0,0,2.79182999001381,0,1.37518422999129,0.589257170947335,0,0.186399445825301,0,0,0.579728977403356,42.1607699720879,201.271514777494,131.14787556799,109.812214548656,72.5803557097684,10.3928870897496,0,0,0,0,0,0,0,0,0,0,24.777901899036,0.258937883647172,0,0.867426633830679,1.21786191324856,3.22861696158482,1.80867168663147,3.64524992120685,0.753999547978053,147.575395737421,0.722996784599558,0.884610551949874,0,0,0,0,0,7.33063473847093,0,0.359445373517761,0,0.127070227073065,0.449371918214468,0.457500602818626,0,0.173824320192276,0.255715457330331,1.45451631191692,0.648965052271031,0.101839363850316,0.373220911830279,1.0108910337347,0.420883711772948,0.130120442962704,0,0,0.753524089178575,0.272145996605311,0.12811372028485,0.0937017245597288,0.258703370739016,0.215567992932842,0.378212160335639,0,0,0,0.348252166522167,0,0,0,0,0,0,0.469052119962192,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0.439100230582101,0.268412837520744,0.420579897128254,0.102904612379284,0,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0.380451252225118,0.474529061544512,0.494096864172033,0,0,0.19496408711912,0,0,0.199141273254367,0,0.342745537829186,1.1270773567308,0,0.193952487167626,0.350679099451593,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,32.3133363524992,2.66952169145751,1.76903095601883,4.04751802292737,5.88294352026658,22.1882986972223,43.7956465064042,68.1839845758421,139.76056548008,62.8745636200707,623.954016328719,98.2452101844849,82.6899833753586,47.484829054057,37.4940594260796,138.461290631286,1.10851914099963,0,0,0,0.234690248288502,0.167506257441816,1.42826184531608,1.75620283072019,0.472905432318573,0.664394068946325,0.637819074629948,0.327726629431476,0.172684981865896,0.723245292907558,1.50791283939272,0,79.1740479560648,43.322069169843,1.60550589987792,2.22702204525186,0,0.757412781613119,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0,0.283076530788832,0,0,0.790575555893047,0,0.851640511249612,2.84904965867608,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0.775284879504663,0.727067458955011,1.42598951353889,0.632073515871632,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0.304464949114599,0,2.33015277950202,0,0.32977250588296,0.161464426695906,0,0.238744688006273,0.164140899745061,0,3.52308073819968,0.341741761595705,0.619160603889667,0.555583582109135,0,0.136694227721025,0.228778173206523,0,0.139951452323658,0,0,0,0.406638934253697,0,0,0.87345025498471,1.07891477107857,6.61227645802687,0.26175594198403,0,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0.911430693907651,0,0,0,0.632022241256357,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,1.15913756419314,0.750729901804728,0.183151624267265,0.214368379079066,0.501572104035363,0,0.460325236507177,0,0,0,0,0.675022500231806,0,0.906284817968409,0.51776031175182,0,0.399024873401031,0,1.70174701947806,0.838452650511929,2.20612210140017,4.4449345560323,4.73880631649457,5.45562656306086,2.77966932940177,2.78827229879264,3.77252682772152,4.68207537349412,2.88113185821912,2.52716063404698,1.90517476513229,2.89710814862139,3.6652751888104,2.06042950401653,4.12156976376312,3.42869252385415,4.43689515398344,3.33810665926249,4.21504608233753,4.79957840118186,4.06150117880047,3.84148743032822,4.47218509444333,4.07412341537585,3.36685362994643,2.25406534435931,2.46261205938909,4.09231043169689,2.78886314134739,3.85813221962283,0.249810577937946,8.18760629558929,3.43793686477277,0.382576664137687,0.441182838239031,0|short_description=p2@Trf}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=22041
|HGNC=
|MCL_coexpression_id=5
|TSSclassifier=NA
|UniProt=F7BAE9
|association_with_transcript=-17bp_to_ENSMUST00000170904_5end
|cluster_id=chr9:103124410..103124479,-
|description=CAGE_peak_2_at_Trf_5end
|id=chr9:103124410..103124479,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002365!9.95e-17!25;UBERON:0002330!9.95e-17!25;UBERON:0002107!2.83e-15!22;UBERON:0007499!2.83e-15!22;UBERON:0006925!2.83e-15!22;UBERON:0009497!2.83e-15!22;UBERON:0000015!2.83e-15!22;UBERON:0002423!2.83e-15!22;UBERON:0006235!2.83e-15!22;UBERON:0008835!2.83e-15!22;UBERON:0003894!2.83e-15!22;UBERON:0004161!2.83e-15!22;UBERON:0008836!2.83e-15!22;UBERON:0009854!5.02e-14!23;UBERON:0009856!5.02e-14!23;UBERON:0005172!2.58e-12!49;UBERON:0005173!2.58e-12!49;UBERON:0002417!2.58e-12!49;UBERON:0000916!2.58e-12!49;UBERON:0009569!1.34e-10!66;UBERON:0005177!9.77e-10!85;UBERON:0005256!1.20e-07!47
|ontology_enrichment_uberon_v019_2=UBERON:0002365,6.16e-24,25;UBERON:0002330,6.16e-24,25;UBERON:0002107,6.47e-23,22;UBERON:0007499,6.47e-23,22;UBERON:0006925,6.47e-23,22;UBERON:0009497,6.47e-23,22;UBERON:0000015,6.47e-23,22;UBERON:0002423,6.47e-23,22;UBERON:0006235,6.47e-23,22;UBERON:0008835,6.47e-23,22;UBERON:0003894,6.47e-23,22;UBERON:0004161,6.47e-23,22;UBERON:0008836,6.47e-23,22;UBERON:0009854,1.41e-21,23;UBERON:0009856,1.41e-21,23;UBERON:0005256,7.36e-13,45;UBERON:0005172,4.30e-11,49;UBERON:0005173,4.30e-11,49;UBERON:0002417,4.30e-11,49;UBERON:0000916,4.30e-11,49;UBERON:0009569,5.87e-08,66;UBERON:0003104,5.98e-08,61;UBERON:0009142,5.98e-08,61;UBERON:0003914,1.35e-07,47;UBERON:0002530,6.07e-07,65
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699561878128147,0.157731082679119,0,0,0.17008658030214,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7997994345628,3.9554654502679,2.1314403448383,0,1.15265491596466,0.103689612308478,0.135005938331691,0,1.14260393761521,0.220868540951614,0,0.0958454710182364,0,0,0.893811366596314,2.15049146558741,0,0,0,2.79182999001381,0,1.37518422999129,0.589257170947335,0,0.186399445825301,0,0,0.579728977403356,42.1607699720879,201.271514777494,131.14787556799,109.812214548656,72.5803557097684,10.3928870897496,0,0,0,0,0,0,0,0,0,0,24.777901899036,0.258937883647172,0,0.867426633830679,1.21786191324856,3.22861696158482,1.80867168663147,3.64524992120685,0.753999547978053,147.575395737421,0.722996784599558,0.884610551949874,0,0,0,0,0,7.33063473847093,0,0.359445373517761,0,0.127070227073065,0.449371918214468,0.457500602818626,0,0.173824320192276,0.255715457330331,1.45451631191692,0.648965052271031,0.101839363850316,0.373220911830279,1.0108910337347,0.420883711772948,0.130120442962704,0,0,0.753524089178575,0.272145996605311,0.12811372028485,0.0937017245597288,0.258703370739016,0.215567992932842,0.378212160335639,0,0,0,0.348252166522167,0,0,0,0,0,0,0.469052119962192,0,0,0,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0.439100230582101,0.268412837520744,0.420579897128254,0.102904612379284,0,0.264450566663544,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0.380451252225118,0.474529061544512,0.494096864172033,0,0,0.19496408711912,0,0,0.199141273254367,0,0.342745537829186,1.1270773567308,0,0.193952487167626,0.350679099451593,0.0632365371242573,0.147610147979602,0.156998727841375,0.123397163921801,32.3133363524992,2.66952169145751,1.76903095601883,4.04751802292737,5.88294352026658,22.1882986972223,43.7956465064042,68.1839845758421,139.76056548008,62.8745636200707,623.954016328719,98.2452101844849,82.6899833753586,47.484829054057,37.4940594260796,138.461290631286,1.10851914099963,0,0,0,0.234690248288502,0.167506257441816,1.42826184531608,1.75620283072019,0.472905432318573,0.664394068946325,0.637819074629948,0.327726629431476,0.172684981865896,0.723245292907558,1.50791283939272,0,79.1740479560648,43.322069169843,1.60550589987792,2.22702204525186,0,0.757412781613119,0.315508219416257,0.390438744296638,0.430846795465598,0.238968797952552,0,0.283076530788832,0,0,0.790575555893047,0,0.851640511249612,2.84904965867608,0,0,0,0,0,0.188605079755898,0,0.307435147943927,0.775284879504663,0.727067458955011,1.42598951353889,0.632073515871632,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0.304464949114599,0,2.33015277950202,0,0.32977250588296,0.161464426695906,0,0.238744688006273,0.164140899745061,0,3.52308073819968,0.341741761595705,0.619160603889667,0.555583582109135,0,0.136694227721025,0.228778173206523,0,0.139951452323658,0,0,0,0.406638934253697,0,0,0.87345025498471,1.07891477107857,6.61227645802687,0.26175594198403,0,0.621339313086926,0,0.149516546043979,0,0,0,0,0,0.911430693907651,0,0,0,0.632022241256357,0,0.102710957164827,0,0.179026695667481,0,0,0,0,0,0,0,0.0962118416403295,0.116876902181569,0,0,0,0,1.15913756419314,0.750729901804728,0.183151624267265,0.214368379079066,0.501572104035363,0,0.460325236507177,0,0,0,0,0.675022500231806,0,0.906284817968409,0.51776031175182,0,0.399024873401031,0,1.70174701947806,0.838452650511929,2.20612210140017,4.4449345560323,4.73880631649457,5.45562656306086,2.77966932940177,2.78827229879264,3.77252682772152,4.68207537349412,2.88113185821912,2.52716063404698,1.90517476513229,2.89710814862139,3.6652751888104,2.06042950401653,4.12156976376312,3.42869252385415,4.43689515398344,3.33810665926249,4.21504608233753,4.79957840118186,4.06150117880047,3.84148743032822,4.47218509444333,4.07412341537585,3.36685362994643,2.25406534435931,2.46261205938909,4.09231043169689,2.78886314134739,3.85813221962283,0.249810577937946,8.18760629558929,3.43793686477277,0.382576664137687,0.441182838239031,0
|short_description=p2@Trf
}}

Latest revision as of 01:57, 26 September 2015

Short description:p2@Trf
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Trf_5end
Coexpression cluster:MCL_coexpression_mm9:5
Association with transcript: -17bp_to_ENSMUST00000170904_5end
EntrezGene:Trf
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Trf

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.17
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.22
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.80
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.10
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F11.14
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.22
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F30.89
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.15
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.00
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.00
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.00
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.38
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.59
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.00
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.19
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F742.16
Mouse hepatocyte, donor1.CNhs13078.11714-123C4201.27
Mouse hepatocyte, donor3.CNhs12615.11637-122C8131.15
Mouse hepatocyte, donor6.CNhs13090.11822-124F4109.81
Mouse hepatocyte, donor8.CNhs13091.11824-124F672.58
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B624.78
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.87
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I13.23
adrenal gland, embryo E18.CNhs11026.1262-18F51.81
adrenal gland, neonate N00.CNhs11191.1311-23C13.65
adrenal gland, neonate N25.CNhs11223.1377-27I30.75
amnion, adult pregnant day17.5.CNhs10488.583-22A8147.58
aorta, adult.CNhs10498.46-23H10.72
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.00
cerebellum, neonate N30.CNhs11135.1395-42I27.33
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.36
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A40.45
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.00
cortex, adult.CNhs10473.12-14D50.17
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F21.45
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.37
epididymis, adult.CNhs10490.58-23B21.01
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.00
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C60.27
eyeball, neonate N01.CNhs11140.1532-43E70.13
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.47
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.44
heart, neonate N30.CNhs11202.1390-42D20.27
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G10.10
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.35
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B232.31
liver, embryo E12.CNhs10601.355-15F82.67
liver, embryo E13.CNhs10524.378-3H61.77
liver, embryo E14.CNhs10594.409-16E14.05
liver, embryo E15.CNhs10520.433-16D75.88
liver, embryo E16.CNhs10523.462-17F522.19
liver, embryo E17.CNhs10510.481-18A343.80
liver, embryo E18.CNhs10579.499-43G468.18
liver, neonate N00.CNhs11117.641-24F4139.76
liver, neonate N03.CNhs11123.1345-25G262.87
liver, neonate N06.CNhs11101.684-20A8623.95
liver, neonate N07.CNhs11103.716-20H298.25
liver, neonate N10.CNhs11115.751-24B982.69
liver, neonate N20.CNhs11220.823-25A347.48
liver, neonate N25.CNhs11198.1368-26H137.49
liver, neonate N30.CNhs11106.1382-42D1138.46
lung, adult.CNhs10474.28-22B11.11
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I61.43
lung, neonate N00.CNhs11224.640-42C61.76
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.72
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A11.51
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B679.17
mammary gland, adult pregnant day19.CNhs10476.588-5H243.32
medulla oblongata, adult.CNhs10477.17-12C21.61
medulla oblongata, neonate N30.CNhs11200.1396-42A32.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.76
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.00
ovary, adult.CNhs10507.91-2I70.85
ovary, embryo E18.CNhs11040.505-44H72.85
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D81.43
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.00
pituitary gland, embryo E17.CNhs11039.1265-44F50.00
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G32.33
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.52
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B81.08
stomach, neonate N07.CNhs11210.718-18A96.61
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.91
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.63
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.75
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F80.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.00
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.52
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H20.00
whole body, embryo E14.5.CNhs10578.420-27D21.70
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F22.21
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G55.46
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.68
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.91
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.90
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.12
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.43
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.44
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.34
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.22
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.06
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.84
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G54.47
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.07
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.79
whole body, embryo E17.5.CNhs10513.490-9F93.86
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B38.19
whole body, neonate N00.CNhs10525.657-19C23.44
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
exocrine gland6.16e-2425
exocrine system6.16e-2425
liver6.47e-2322
epithelial sac6.47e-2322
digestive gland6.47e-2322
epithelium of foregut-midgut junction6.47e-2322
anatomical boundary6.47e-2322
hepatobiliary system6.47e-2322
foregut-midgut junction6.47e-2322
hepatic diverticulum6.47e-2322
liver primordium6.47e-2322
septum transversum6.47e-2322
liver bud6.47e-2322
digestive tract diverticulum1.41e-2123
sac1.41e-2123
trunk mesenchyme7.36e-1345
abdomen element4.30e-1149
abdominal segment element4.30e-1149
abdominal segment of trunk4.30e-1149
abdomen4.30e-1149
subdivision of trunk5.87e-0866
mesenchyme5.98e-0861
entire embryonic mesenchyme5.98e-0861
epithelial tube1.35e-0747
gland6.07e-0765
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