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FFCP PHASE1:Mm9::chr9:103132592..103132610,-: Difference between revisions

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{{FFCP|EntrezGene=22041|HGNC=|MCL_coexpression_id=8|UniProt=Q921I1,E9Q939,E9Q2Q7|association_with_transcript=0bp_to_ENSMUST00000112645,ENSMUST00000164377,ENSMUST00000165296_5end|description=CAGE_peak_1_at_Trf_5end|id=chr9:103132592..103132610,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002365!8.90e-15!25;UBERON:0002330!8.90e-15!25;UBERON:0002107!6.14e-14!22;UBERON:0007499!6.14e-14!22;UBERON:0006925!6.14e-14!22;UBERON:0009497!6.14e-14!22;UBERON:0000015!6.14e-14!22;UBERON:0002423!6.14e-14!22;UBERON:0006235!6.14e-14!22;UBERON:0008835!6.14e-14!22;UBERON:0003894!6.14e-14!22;UBERON:0004161!6.14e-14!22;UBERON:0008836!6.14e-14!22;UBERON:0009854!1.82e-13!23;UBERON:0009856!1.82e-13!23;UBERON:0005172!4.17e-10!49;UBERON:0005173!4.17e-10!49;UBERON:0002417!4.17e-10!49;UBERON:0000916!4.17e-10!49;UBERON:0005177!2.75e-09!85;UBERON:0009569!7.33e-09!66;UBERON:0005256!2.33e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0002365,8.73e-15,25;UBERON:0002330,8.73e-15,25;UBERON:0002107,6.02e-14,22;UBERON:0007499,6.02e-14,22;UBERON:0006925,6.02e-14,22;UBERON:0009497,6.02e-14,22;UBERON:0000015,6.02e-14,22;UBERON:0002423,6.02e-14,22;UBERON:0006235,6.02e-14,22;UBERON:0008835,6.02e-14,22;UBERON:0003894,6.02e-14,22;UBERON:0004161,6.02e-14,22;UBERON:0008836,6.02e-14,22;UBERON:0009854,1.79e-13,23;UBERON:0009856,1.79e-13,23;UBERON:0005172,4.12e-10,49;UBERON:0005173,4.12e-10,49;UBERON:0002417,4.12e-10,49;UBERON:0000916,4.12e-10,49;UBERON:0005177,1.73e-09,79;UBERON:0009569,8.16e-09,66;UBERON:0005256,2.52e-08,45|phase1_expression=11.2104192973356,19.1936474201649,16.3799726180233,1.51232105653415,1.00179145989269,1.00727563147134,1.40167584357315,0.774739940649458,2.67498572088167,9.83071010552373,0,0,0.171200729931206,0,40.6393909415109,22.2722794128809,42.6732745658169,9.77932712610537,16.5908464662944,25.0389894560838,50.4306710595844,0,0,14.3993180514066,18.1233332043064,12.0588712464154,3.87685796543167,2.37018355954478,0.380046838912748,0.756090389279792,0.443461021310609,0,0,15.8481681015439,1.44425809875637,1.49611180822643,0.612508068787107,28.4601508901097,21.8773896466664,14.6586648312664,47.0585190424811,55.3266842816341,24.7610280045888,0,0,0.183546752161682,10.1710874765245,0.436050312760893,3.73466510648602,2.52758868796568,1.1198913730029,0,0.838913030288682,0.725362142011344,0,3.60163210450326,5.15760191889762,38.1597348285307,1.41621522601718,1.5869729378161,1.26766280701236,1.0165335962074,0.889294796111139,120.136612257067,155.252018923015,125.75498034546,30.2596111623589,37.6533939215123,3.62913643079672,3.10513658162888,2.52389953621658,81.6961815394878,49.9162902550647,1.83736198822431,2.49198224647415,2.75765635983006,211.422491518826,301.086743204873,345.614699826548,2.2420668914133,2.74462930807229,5.73004707612436,413.749204520047,201.469014391341,310.486039482478,14.7314292736834,6.83384067835694,7.26957838718672,4.84647637332378,8.08615693142605,86.6694821218017,9103.28461846307,13470.2321207505,18692.0803391842,12421.1259959296,8454.71538641382,2503.00045558808,0,0,0,1.12674735821344,0,0,0,1.5154372870785,0.253359865475099,0.505524445014783,3847.31164325401,28.7421050848361,94.4092004452285,83.2729568477452,322.428941532558,885.563509463265,671.469363661933,410.737354025017,150.799909595611,12870.2059950902,119.294469458927,27.4229271104461,14.3972496453194,21.2007857721978,29.0925151881133,24.2309289583559,133.800824234277,213.635640949724,8.43008282188352,7.6681679683789,7.7987355029143,11.1821799824297,210.306057724371,173.392728468259,1.13088916901578,80.8283088894086,61.3717097592793,274.695794907738,238.494656709604,34.0143475260056,70.0411244534824,22.9977710174644,79.3365796692007,3.90361328888111,2.75882525320168,3.42118046630164,321.604081261416,16.8730517895293,15.5017601544668,12.087522468205,130.386498852464,0.215567992932842,24.016472181313,1.05570674498369,1.31517439456545,1.94633074457919,7.3132954969655,3.49829631893504,2.38841120182192,6.31991868581911,7.20574139921202,11.9348669746149,12.4275463521301,33.7717526372778,3.24111710629827,4.02466050494857,11.0187969778546,9.41029388613007,8.60375595576509,20.6570519077707,7.82327793860036,13.1647879930784,10.1783827729039,11.6739085746032,18.2749984281665,37.7626198300607,29.3912057085214,122.599040012886,6.79170441703277,9.58214470653014,39.6675849995316,16.2099070406778,30.190767341857,22.9384081153326,15.5296313959974,25.795853086005,163.403812830688,10.4396393539793,92.5608125548941,124.159593147333,73.2159817111435,32.7539666360122,14.3811105384675,10.8069024937347,14.5373129475688,5.31070122668629,50.6120910861099,4.50830942692322,20.9760867680674,17.6496763322539,35.9095397838431,10.3707920883782,15.6466756858378,10.3619160375307,14.1906738510071,10371.691611271,486.019792950982,638.030498137457,999.28722743829,2352.56882774247,5910.52865405248,13614.8442947525,13902.628146173,11670.493623267,12447.5162282949,15841.8186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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=22041
|HGNC=
|MCL_coexpression_id=8
|TSSclassifier=NA
|UniProt=Q921I1,E9Q939,E9Q2Q7
|association_with_transcript=0bp_to_ENSMUST00000112645,ENSMUST00000164377,ENSMUST00000165296_5end
|cluster_id=chr9:103132592..103132610,-
|description=CAGE_peak_1_at_Trf_5end
|id=chr9:103132592..103132610,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0002365,8.73e-15,25;UBERON:0002330,8.73e-15,25;UBERON:0002107,6.02e-14,22;UBERON:0007499,6.02e-14,22;UBERON:0006925,6.02e-14,22;UBERON:0009497,6.02e-14,22;UBERON:0000015,6.02e-14,22;UBERON:0002423,6.02e-14,22;UBERON:0006235,6.02e-14,22;UBERON:0008835,6.02e-14,22;UBERON:0003894,6.02e-14,22;UBERON:0004161,6.02e-14,22;UBERON:0008836,6.02e-14,22;UBERON:0009854,1.79e-13,23;UBERON:0009856,1.79e-13,23;UBERON:0005172,4.12e-10,49;UBERON:0005173,4.12e-10,49;UBERON:0002417,4.12e-10,49;UBERON:0000916,4.12e-10,49;UBERON:0005177,1.73e-09,79;UBERON:0009569,8.16e-09,66;UBERON:0005256,2.52e-08,45
|phase1_expression=11.2104192973356,19.1936474201649,16.3799726180233,1.51232105653415,1.00179145989269,1.00727563147134,1.40167584357315,0.774739940649458,2.67498572088167,9.83071010552373,0,0,0.171200729931206,0,40.6393909415109,22.2722794128809,42.6732745658169,9.77932712610537,16.5908464662944,25.0389894560838,50.4306710595844,0,0,14.3993180514066,18.1233332043064,12.0588712464154,3.87685796543167,2.37018355954478,0.380046838912748,0.756090389279792,0.443461021310609,0,0,15.8481681015439,1.44425809875637,1.49611180822643,0.612508068787107,28.4601508901097,21.8773896466664,14.6586648312664,47.0585190424811,55.3266842816341,24.7610280045888,0,0,0.183546752161682,10.1710874765245,0.436050312760893,3.73466510648602,2.52758868796568,1.1198913730029,0,0.838913030288682,0.725362142011344,0,3.60163210450326,5.15760191889762,38.1597348285307,1.41621522601718,1.5869729378161,1.26766280701236,1.0165335962074,0.889294796111139,120.136612257067,155.252018923015,125.75498034546,30.2596111623589,37.6533939215123,3.62913643079672,3.10513658162888,2.52389953621658,81.6961815394878,49.9162902550647,1.83736198822431,2.49198224647415,2.75765635983006,211.422491518826,301.086743204873,345.614699826548,2.2420668914133,2.74462930807229,5.73004707612436,413.749204520047,201.469014391341,310.486039482478,14.7314292736834,6.83384067835694,7.26957838718672,4.84647637332378,8.08615693142605,86.6694821218017,9103.28461846307,13470.2321207505,18692.0803391842,12421.1259959296,8454.71538641382,2503.00045558808,0,0,0,1.12674735821344,0,0,0,1.5154372870785,0.253359865475099,0.505524445014783,3847.31164325401,28.7421050848361,94.4092004452285,83.2729568477452,322.428941532558,885.563509463265,671.469363661933,410.737354025017,150.799909595611,12870.2059950902,119.294469458927,27.4229271104461,14.3972496453194,21.2007857721978,29.0925151881133,24.2309289583559,133.800824234277,213.635640949724,8.43008282188352,7.6681679683789,7.7987355029143,11.1821799824297,210.306057724371,173.392728468259,1.13088916901578,80.8283088894086,61.3717097592793,274.695794907738,238.494656709604,34.0143475260056,70.0411244534824,22.9977710174644,79.3365796692007,3.90361328888111,2.75882525320168,3.42118046630164,321.604081261416,16.8730517895293,15.5017601544668,12.087522468205,130.386498852464,0.215567992932842,24.016472181313,1.05570674498369,1.31517439456545,1.94633074457919,7.3132954969655,3.49829631893504,2.38841120182192,6.31991868581911,7.20574139921202,11.9348669746149,12.4275463521301,33.7717526372778,3.24111710629827,4.02466050494857,11.0187969778546,9.41029388613007,8.60375595576509,20.6570519077707,7.82327793860036,13.1647879930784,10.1783827729039,11.6739085746032,18.2749984281665,37.7626198300607,29.3912057085214,122.599040012886,6.79170441703277,9.58214470653014,39.6675849995316,16.2099070406778,30.190767341857,22.9384081153326,15.5296313959974,25.795853086005,163.403812830688,10.4396393539793,92.5608125548941,124.159593147333,73.2159817111435,32.7539666360122,14.3811105384675,10.8069024937347,14.5373129475688,5.31070122668629,50.6120910861099,4.50830942692322,20.9760867680674,17.6496763322539,35.9095397838431,10.3707920883782,15.6466756858378,10.3619160375307,14.1906738510071,10371.691611271,486.019792950982,638.030498137457,999.28722743829,2352.56882774247,5910.52865405248,13614.8442947525,13902.628146173,11670.493623267,12447.5162282949,15841.8186772492,17944.6364965752,20588.2456720987,14212.613462084,11938.5390750562,13251.758644809,113.623211952462,19.3281240005894,6.51859905768104,5.94107800213158,17.3670783733492,50.0843709751029,265.894746869677,267.918498508758,79.6057477736264,88.1429464802124,98.861956567642,93.0743627585392,105.337838938196,115.140650630883,60.3165135757089,10.3342079925555,15614.9909611735,6943.12041051968,590.344519385111,662.832087678909,0.163934945376675,42.1626448431303,36.2834452328695,19.1314984705353,50.1936516717422,31.5438813297369,30.523418349288,58.0306888117106,22.6693992937941,21.3346776275258,16.9973744517005,48.8408400961147,95.5256773451648,597.588165907309,16.125808976004,12.7026994688852,21.2392221343941,36.4170954232472,16.3254720760966,20.369348613637,27.7583779307926,84.2372305366361,166.686249093503,72.7067458955011,94.8283026503359,38.5564844681696,26.3546521437497,56.7245487865028,4.42571487479924,3.24109969256358,4.65691261617916,8.57348140126369,3.3694644392032,5.88617098086833,9.05019613311665,11.8741330154694,77.2069919529607,602.026745394977,6.83638033970382,73.2094963060171,56.8354781969587,57.9607208559578,43.2127885291354,25.4418394604845,8.74442509889552,692.934353613275,47.1603631002073,45.8178846878354,52.2248567182587,38.0504283149476,24.4682667620635,35.460616847011,14.9581018394593,9.93655311497972,14.6491972232689,26.7307773044232,13.6024477239888,42.0871296952577,49.466446096385,44.5358070510818,274.481742628945,430.486993660348,1893.59067066745,39.0016353556204,13.73918716893,24.2322332103901,1.12738587736838,2.0932316446157,2.31641886639937,0.972255941720238,11.8827037599513,2.36538575687089,3.40335992072686,381.36864320793,2.30690557736564,4.34851417486811,20.7381604505663,16.7485893932934,12.3662381327,4.62199307241723,4.54722880422283,4.29664069601955,8.74197961037565,7.81270421879797,6.20296014133224,4.74542314756294,5.18206285253999,5.94874492307359,8.28391986287895,9.33254863911196,10.9864288050675,11.3365191807606,0,0,0,140.448834861402,23.6479919068489,11.9048555773722,12.6477343656649,11.034586288778,19.7663144915973,26.6988637174163,26.9260891316516,20.9660882459299,50.0110239432569,50.6113911251099,49.9516650171536,47.7340475417674,51.6582346241993,38.8320233813865,4.77421798887213,49.4790843017279,120.367192056665,423.735007850037,295.135332980199,860.939150071416,1078.34112329344,995.767431635576,1084.38600921074,1150.78310237233,1049.65778084548,1111.57502978815,1190.46448446461,1254.76493683063,1145.32068644388,1154.05961397889,1160.69740866367,1221.30827475572,1276.23003478784,1192.45845200875,1028.26488790386,1181.45644160271,1321.41336468805,1246.20017620558,1068.42379585525,1202.79665118018,1251.95904634126,1179.34151637585,1277.23769072033,805.239159828855,1215.17849064592,1296.41749254479,1213.7792740413,1184.02734034315,1282.25024319165,12.4905288968973,1661.14835157085,1172.33647088752,37.3012247534245,170.958349817625,63.0680512887546
|short_description=p1@Trf
}}

Latest revision as of 02:01, 26 September 2015

Short description:p1@Trf
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Trf_5end
Coexpression cluster:MCL_coexpression_mm9:8
Association with transcript: 0bp_to_ENSMUST00000112645, ENSMUST00000164377, ENSMUST00000165296_5end
EntrezGene:Trf
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Trf

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I519.19
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I616.38
CD326+ enterocyte, pool1.CNhs13542.11848-124I31.51
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.67
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F29.83
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.17
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A140.64
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A322.27
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A542.67
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A29.78
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A416.59
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A625.04
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A350.43
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D114.40
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D218.12
GP2+ M cell, pool1.CNhs13228.11845-124H912.06
GP2+ M cell, pool2.CNhs13231.11846-124I13.88
GP2+ M cell, pool3.CNhs13240.11847-124I22.37
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.76
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.44
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.50
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.61
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G828.46
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H121.88
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H314.66
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G947.06
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H255.33
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H424.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B710.17
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.73
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.53
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.84
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.60
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E15.16
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C538.16
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E31.59
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C7120.14
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E7155.25
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D2125.75
Mouse Microglia, donor1.CNhs12629.11718-123C830.26
Mouse Microglia, donor2.CNhs12634.11736-123E837.65
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.63
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F53.11
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.52
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F181.70
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D549.92
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.84
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.49
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3211.42
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3301.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7345.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.24
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.74
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4413.75
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5201.47
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6310.49
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D614.73
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E17.27
Mouse Schwann, donor1.CNhs12507.11728-123D94.85
Mouse Schwann, donor2.CNhs12573.11746-123F98.09
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G386.67
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F79103.28
Mouse hepatocyte, donor1.CNhs13078.11714-123C413470.23
Mouse hepatocyte, donor3.CNhs12615.11637-122C818692.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F412421.13
Mouse hepatocyte, donor8.CNhs13091.11824-124F68454.72
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72503.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.51
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63847.31
accessory axillary lymph node, adult.CNhs10475.1063-29H928.74
adrenal gland, adult.CNhs10508.49-24D794.41
adrenal gland, embryo E14.CNhs11038.406-44C583.27
adrenal gland, embryo E16.CNhs11004.1254-43D6322.43
adrenal gland, embryo E17.CNhs11043.1263-45I1885.56
adrenal gland, embryo E18.CNhs11026.1262-18F5671.47
adrenal gland, neonate N00.CNhs11191.1311-23C1410.74
adrenal gland, neonate N25.CNhs11223.1377-27I3150.80
amnion, adult pregnant day17.5.CNhs10488.583-22A812870.21
aorta, adult.CNhs10498.46-23H1119.29
bone (os femoris), adult.CNhs10483.56-12G227.42
bone (os femoris), neonate N02.CNhs11227.1985-43F514.40
bone (os femoris), neonate N16.CNhs11225.1525-43A621.20
bone (os femoris), neonate N20.CNhs11195.1350-25C329.09
cecum, adult.CNhs10467.37-13H424.23
cerebellum, adult.CNhs10494.15-8B2133.80
cerebellum, neonate N30.CNhs11135.1395-42I2213.64
colon, adult.CNhs10468.36-18H78.43
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C77.67
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D17.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D411.18
corpora quadrigemina, adult.CNhs10501.16-22A4210.31
corpus striatum, adult.CNhs10487.19-21D8173.39
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D580.83
cortex, neonate N30.CNhs11107.1392-42F261.37
diencephalon, adult.CNhs10482.20-12F2274.70
diencephalon, neonate N30.CNhs11201.1388-42B2238.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B134.01
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A270.04
epididymis, adult.CNhs10490.58-23B223.00
eyeball, adult.CNhs10484.31-12G479.34
eyeball, embryo E12.CNhs11016.345-16C63.90
eyeball, embryo E14.CNhs10521.399-16E22.76
eyeball, embryo E15.CNhs10593.426-16C93.42
eyeball, embryo E17.CNhs11023.1261-18D4321.60
eyeball, neonate N00.CNhs11207.633-15C616.87
eyeball, neonate N01.CNhs11140.1532-43E715.50
eyeball, neonate N02.CNhs11205.1551-44G812.09
eyeball, neonate N16.CNhs11188.777-19A2130.39
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H224.02
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C47.31
forelimb, embryo E18.CNhs11008.1520-43B53.50
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C86.32
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.21
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D511.93
heart, embryo E11.CNhs10586.331-24E912.43
heart, embryo E12.CNhs11015.353-12F533.77
heart, embryo E13.CNhs11013.376-3I93.24
heart, embryo E14.CNhs10597.403-26D44.02
heart, embryo E15.CNhs11017.431-16C811.02
heart, embryo E16.CNhs11021.457-17C69.41
heart, embryo E17.CNhs11025.479-18E58.60
heart, embryo E18.CNhs11030.1283-20G320.66
heart, neonate N00.CNhs11213.639-21E37.82
heart, neonate N03.CNhs11221.1349-25I213.16
heart, neonate N10.CNhs11118.749-24G110.18
heart, neonate N16.CNhs11209.782-15G111.67
heart, neonate N20.CNhs11127.821-26I618.27
heart, neonate N25.CNhs11196.1351-25D337.76
heart, neonate N30.CNhs11202.1390-42D229.39
hippocampus, adult.CNhs10478.13-16E8122.60
hippocampus, neonate N00.CNhs11228.627-43G16.79
intestinal mucosa, adult.CNhs10506.860-29I39.58
intestine, adult.CNhs10496.178-9A339.67
intestine, embryo E12.CNhs11019.1251-16I516.21
intestine, embryo E13.CNhs11010.381-16D530.19
intestine, embryo E15.CNhs10602.976-16D822.94
intestine, embryo E16.CNhs10585.463-22H415.53
intestine, embryo E17.CNhs10582.482-18D325.80
intestine, embryo E18.CNhs10526.1289-20F7163.40
intestine, neonate N00.CNhs11126.644-26D110.44
intestine, neonate N01.CNhs11192.1322-23E992.56
intestine, neonate N06.CNhs11102.688-20B8124.16
intestine, neonate N07.CNhs11095.720-20F273.22
intestine, neonate N10.CNhs11098.755-23A532.75
intestine, neonate N20.CNhs11187.827-18D114.38
intestine, neonate N25.CNhs11121.1352-25E310.81
intestine, neonate N30.CNhs11131.1384-42G114.54
kidney, embryo E14.CNhs10606.411-4I95.31
kidney, embryo E15.CNhs10997.434-16F850.61
kidney, embryo E16.CNhs10584.464-22A54.51
kidney, embryo E17.CNhs11028.483-18I220.98
kidney, embryo E18.CNhs11001.1288-20C717.65
kidney, neonate N00.CNhs11214.646-21G735.91
kidney, neonate N10.CNhs11206.758-6D510.37
kidney, neonate N20.CNhs11113.832-19I115.65
kidney, neonate N25.CNhs11122.1353-25F310.36
kidney, neonate N30.CNhs11203.1385-42H114.19
liver, adult pregnant day01.CNhs10466.508-5B210371.69
liver, embryo E12.CNhs10601.355-15F8486.02
liver, embryo E13.CNhs10524.378-3H6638.03
liver, embryo E14.CNhs10594.409-16E1999.29
liver, embryo E15.CNhs10520.433-16D72352.57
liver, embryo E16.CNhs10523.462-17F55910.53
liver, embryo E17.CNhs10510.481-18A313614.84
liver, embryo E18.CNhs10579.499-43G413902.63
liver, neonate N00.CNhs11117.641-24F411670.49
liver, neonate N03.CNhs11123.1345-25G212447.52
liver, neonate N06.CNhs11101.684-20A815841.82
liver, neonate N07.CNhs11103.716-20H217944.64
liver, neonate N10.CNhs11115.751-24B920588.25
liver, neonate N20.CNhs11220.823-25A314212.61
liver, neonate N25.CNhs11198.1368-26H111938.54
liver, neonate N30.CNhs11106.1382-42D113251.76
lung, adult.CNhs10474.28-22B1113.62
lung, embryo E12.CNhs10522.354-16G219.33
lung, embryo E14.CNhs10604.404-26F86.52
lung, embryo E15.CNhs11020.432-17C55.94
lung, embryo E16.CNhs10998.458-17B617.37
lung, embryo E17.CNhs10605.480-44A650.08
lung, embryo E18.CNhs10583.1287-20I6265.89
lung, neonate N00.CNhs11224.640-42C6267.92
lung, neonate N06.CNhs11212.683-20E579.61
lung, neonate N07.CNhs11111.715-19A388.14
lung, neonate N10.CNhs11219.750-23E698.86
lung, neonate N20.CNhs11109.822-18A493.07
lung, neonate N25.CNhs11119.1359-25C7105.34
lung, neonate N30.CNhs11133.1394-42H2115.14
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A160.32
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A110.33
mammary gland, adult lactating day02.CNhs10480.595-22B615614.99
mammary gland, adult pregnant day19.CNhs10476.588-5H26943.12
medulla oblongata, adult.CNhs10477.17-12C2590.34
medulla oblongata, neonate N30.CNhs11200.1396-42A3662.83
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.16
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C242.16
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E136.28
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E219.13
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E350.19
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D731.54
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D830.52
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D958.03
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D422.67
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D521.33
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D617.00
olfactory brain, adult.CNhs10489.18-22I948.84
ovary, adult.CNhs10507.91-2I795.53
ovary, embryo E18.CNhs11040.505-44H7597.59
ovary, neonate N00.CNhs11217.1299-22I416.13
oviduct, adult pregnant day01.CNhs10500.988-6G612.70
pancreas, adult.CNhs10486.34-16E421.24
pancreas, embryo E14.CNhs11012.405-44F436.42
pancreas, embryo E15.CNhs11042.1556-45F216.33
pancreas, embryo E16.CNhs11003.460-26E520.37
pancreas, embryo E17.CNhs10599.1558-45G327.76
pancreas, embryo E18.CNhs10580.1535-43I784.24
pancreas, neonate N00.CNhs11105.645-26G9166.69
pancreas, neonate N01.CNhs11138.1531-43D772.71
pancreas, neonate N02.CNhs11139.1539-43D894.83
pancreas, neonate N16.CNhs11136.787-43B638.56
pancreas, neonate N25.CNhs11094.1555-45E226.35
pancreas, neonate N30.CNhs11182.1548-44H556.72
pituitary gland, adult.CNhs10493.21-1G84.43
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C74.66
pituitary gland, embryo E14.CNhs11037.398-44A58.57
pituitary gland, embryo E15.CNhs10592.427-16B93.37
pituitary gland, embryo E16.CNhs11036.449-43F65.89
pituitary gland, embryo E17.CNhs11039.1265-44F59.05
pituitary gland, neonate N00.CNhs11190.1308-22E911.87
placenta, adult pregnant day10.CNhs10472.539-13I777.21
placenta, adult pregnant day17.CNhs10464.577-18G3602.03
prostate, adult.CNhs10470.859-1F86.84
skin, adult.CNhs10492.30-1C373.21
skin, neonate N00.CNhs11124.650-25G456.84
skin, neonate N03.CNhs11215.662-22H357.96
skin, neonate N06.CNhs11097.693-20I543.21
skin, neonate N10.CNhs11108.762-6C425.44
small intestine, neonate N16.CNhs11114.790-21I18.74
spinal cord, adult.CNhs10505.24-13C9692.93
spleen, adult.CNhs10465.25-2G247.16
spleen, embryo E16.CNhs11035.461-43C145.82
spleen, embryo E18.CNhs11011.1271-21F252.22
spleen, neonate N10.CNhs11116.752-24D138.05
spleen, neonate N20.CNhs11112.824-19H124.47
spleen, neonate N25.CNhs11099.1354-25G335.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C614.96
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C99.94
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D314.65
stomach, adult.CNhs10503.33-1H626.73
stomach, embryo E12.CNhs10588.356-43E313.60
stomach, embryo E15.CNhs10603.1252-16G842.09
stomach, embryo E16.CNhs11022.459-17D449.47
stomach, embryo E17.CNhs11006.1035-18D544.54
stomach, embryo E18.CNhs10999.1286-20C6274.48
stomach, neonate N03.CNhs11193.1340-24B8430.49
stomach, neonate N07.CNhs11210.718-18A91893.59
stomach, neonate N25.CNhs11104.1355-25E439.00
stomach, neonate N30.CNhs11134.1386-42I113.74
submandibular gland, adult.CNhs10469.59-29C124.23
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F52.09
testis, embryo E15.CNhs11034.443-27C52.32
testis, embryo E16.CNhs11033.470-26G50.97
testis, embryo E17.CNhs11029.486-18I511.88
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B73.40
testis, neonate N07.CNhs11222.726-26I4381.37
testis, neonate N10.CNhs11204.763-44D92.31
testis, neonate N20.CNhs11110.839-18H34.35
testis, neonate N30.CNhs11130.1391-42E220.74
thymus, adult.CNhs10471.38-12B516.75
thymus, embryo E14.CNhs11041.402-44I412.37
thymus, embryo E15.CNhs11005.430-45I24.62
thymus, embryo E16.CNhs11002.456-26C54.55
thymus, embryo E17.CNhs10581.478-18C14.30
thymus, embryo E18.CNhs10595.1273-19G48.74
thymus, neonate N02.CNhs11181.1541-43F87.81
thymus, neonate N03.CNhs11137.2104-43C76.20
thymus, neonate N06.CNhs11197.681-26C44.75
thymus, neonate N07.CNhs11211.713-19D35.18
thymus, neonate N10.CNhs11194.748-24E45.95
thymus, neonate N20.CNhs11186.820-7A28.28
thymus, neonate N25.CNhs11125.1362-25G79.33
thymus, neonate N30.CNhs11132.1393-42G210.99
tongue, adult.CNhs10499.32-1B411.34
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E4140.45
uterus, adult pregnant day19.CNhs10497.590-15F523.65
uterus, adult.CNhs10509.92-27E511.90
vagina, adult.CNhs10502.89-27D512.65
vesicular gland, adult.CNhs10491.51-27F811.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A119.77
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A226.70
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A326.93
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.97
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A450.01
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A550.61
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A649.95
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A747.73
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A851.66
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A938.83
whole body, embryo E11.CNhs11014.324-5I84.77
whole body, embryo E12.CNhs10587.857-27C949.48
whole body, embryo E13.CNhs10512.372-23H2120.37
whole body, embryo E14.5.CNhs10578.420-27D2423.74
whole body, embryo E14.CNhs10519.395-14B1295.14
whole body, embryo E16.CNhs10514.453-14F2860.94
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51078.34
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G5995.77
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51084.39
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51150.78
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51049.66
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51111.58
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51190.46
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51254.76
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51145.32
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51154.06
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51160.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51221.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51276.23
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51192.46
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51028.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51181.46
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51321.41
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51246.20
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51068.42
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51202.80
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51251.96
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51179.34
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51277.24
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G5805.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51215.18
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51296.42
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51213.78
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51184.03
whole body, embryo E17.5.CNhs10513.490-9F91282.25
whole body, embryo E17.CNhs10517.475-3I512.49
whole body, embryo E18.CNhs10516.493-3B31661.15
whole body, neonate N00.CNhs10525.657-19C21172.34
whole body, neonate N01.CNhs10576.659-23C637.30
whole body, neonate N06.CNhs10515.692-21D1170.96
whole body, neonate N10.CNhs10518.761-6B463.07





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
exocrine gland8.73e-1525
exocrine system8.73e-1525
liver6.02e-1422
epithelial sac6.02e-1422
digestive gland6.02e-1422
epithelium of foregut-midgut junction6.02e-1422
anatomical boundary6.02e-1422
hepatobiliary system6.02e-1422
foregut-midgut junction6.02e-1422
hepatic diverticulum6.02e-1422
liver primordium6.02e-1422
septum transversum6.02e-1422
liver bud6.02e-1422
digestive tract diverticulum1.79e-1323
sac1.79e-1323
abdomen element4.12e-1049
abdominal segment element4.12e-1049
abdominal segment of trunk4.12e-1049
abdomen4.12e-1049
trunk region element1.73e-0979
subdivision of trunk8.16e-0966
trunk mesenchyme2.52e-0845
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