FFCP PHASE1:Mm9::chr19:59396777..59396778,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=100038969,100503211,20042,434843,626048,665463,665522,665579,665611,670832 | |EntrezGene=100038969,100503211,20042,434843,626048,665463,665522,665579,665611,670832 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1218 | |MCL_coexpression_id=1218 | ||
|TSSclassifier=NA | |||
|UniProt=Q6ZWZ6 | |UniProt=Q6ZWZ6 | ||
|association_with_transcript=-27bp_to_ENSMUST00000086764_5end | |association_with_transcript=-27bp_to_ENSMUST00000086764_5end | ||
|cluster_id=chr19:59396777..59396778,+ | |||
|description=CAGE_peak_1_at_Gm10279_5end,CAGE_peak_1_at_Gm14059_5end,CAGE_peak_1_at_Gm14958_5end,CAGE_peak_1_at_Gm5642_5end,CAGE_peak_1_at_Gm6646_5end,CAGE_peak_1_at_Gm7643_5end,CAGE_peak_1_at_Gm7671_5end,CAGE_peak_1_at_Gm7698_5end,CAGE_peak_1_at_Gm7711_5end,CAGE_peak_1_at_Rps12_5end | |description=CAGE_peak_1_at_Gm10279_5end,CAGE_peak_1_at_Gm14059_5end,CAGE_peak_1_at_Gm14958_5end,CAGE_peak_1_at_Gm5642_5end,CAGE_peak_1_at_Gm6646_5end,CAGE_peak_1_at_Gm7643_5end,CAGE_peak_1_at_Gm7671_5end,CAGE_peak_1_at_Gm7698_5end,CAGE_peak_1_at_Gm7711_5end,CAGE_peak_1_at_Rps12_5end | ||
|id=chr19:59396777..59396778,+ | |id=chr19:59396777..59396778,+ | ||
Latest revision as of 02:06, 26 September 2015
| Short description: | p1@Gm10279, p1@Gm14059, p1@Gm14958, p1@Gm5642, p1@Gm6646, p1@Gm7643, p1@Gm7671, p1@Gm7698, p1@Gm7711, p1@Rps12 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Gm10279_5end, CAGE_peak_1_at_Gm14059_5end, CAGE_peak_1_at_Gm14958_5end, CAGE_peak_1_at_Gm5642_5end, CAGE_peak_1_at_Gm6646_5end, CAGE_peak_1_at_Gm7643_5end, CAGE_peak_1_at_Gm7671_5end, CAGE_peak_1_at_Gm7698_5end, CAGE_peak_1_at_Gm7711_5end, CAGE_peak_1_at_Rps12_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1218 |
| Association with transcript: | -27bp_to_ENSMUST00000086764_5end |
| EntrezGene: | 100038969,100503211,20042,434843,626048,665463,665522,665579,665611,670832 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic cell | 9.79e-11 | 32 |
| hematopoietic oligopotent progenitor cell | 9.79e-11 | 32 |
| hematopoietic stem cell | 9.79e-11 | 32 |
| hematopoietic multipotent progenitor cell | 9.79e-11 | 32 |
| lymphoid lineage restricted progenitor cell | 1.15e-08 | 12 |
| T cell | 3.75e-08 | 11 |
| pro-T cell | 3.75e-08 | 11 |
| hematopoietic lineage restricted progenitor cell | 5.32e-08 | 25 |
| lymphocyte | 5.95e-08 | 13 |
| common lymphoid progenitor | 5.95e-08 | 13 |
| connective tissue cell | 6.80e-08 | 46 |
| mesenchymal cell | 6.80e-08 | 46 |
| motile cell | 3.04e-07 | 54 |
| mature alpha-beta T cell | 3.72e-07 | 9 |
| alpha-beta T cell | 3.72e-07 | 9 |
| immature T cell | 3.72e-07 | 9 |
| mature T cell | 3.72e-07 | 9 |
| immature alpha-beta T cell | 3.72e-07 | 9 |
| CD4-positive, alpha-beta T cell | 9.68e-07 | 8 |
| Ontology term | p-value | n |
|---|---|---|
| connective tissue | 6.80e-08 | 46 |
