FFCP PHASE1:Mm9::chr19:6058235..6058246,+: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr19:6058235..6058246,+ to FFCP PHASE1:Mm9::chr19:6058235..6058246,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14109 | |EntrezGene=14109 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=550 | |||
|TSSclassifier=NA | |||
|UniProt=P35545,Q642K5 | |UniProt=P35545,Q642K5 | ||
|association_with_transcript=268bp_to_NM_001190436,uc008ggu.2_5end | |||
|cluster_id=chr19:6058235..6058246,+ | |||
|description=CAGE_peak_6_at_Fau_5end | |||
|id=chr19:6058235..6058246,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.08e-13!9;CL:0002251!1.08e-13!9;CL:0000239!4.00e-10!6;CL:0000677!4.00e-10!6;CL:0000212!4.00e-10!6;CL:0000584!4.00e-10!6;CL:0002076!7.44e-09!15;CL:0000075!1.67e-08!7;CL:0000066!4.41e-08!25;CL:0000063!3.95e-07!66 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.14e-18,6;CL:0000677,2.14e-18,6;CL:0000584,2.14e-18,6;CL:0002563,5.80e-17,9;CL:0002251,5.80e-17,9;CL:0000075,9.54e-16,7;CL:0000682,6.61e-14,3;CL:0000066,7.06e-13,25;CL:0002076,5.52e-10,15;CL:0000223,2.34e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.85e-22!15;UBERON:0001242!2.08e-19!13;UBERON:0000060!2.08e-19!13;UBERON:0001262!2.08e-19!13;UBERON:0004786!2.08e-19!13;UBERON:0000160!6.23e-18!43;UBERON:0005409!2.04e-14!59;UBERON:0003350!1.08e-13!9;UBERON:0004808!1.08e-13!9;UBERON:0001277!1.08e-13!9;UBERON:0004923!3.01e-12!24;UBERON:0000485!9.06e-11!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,9.18e-40,15;UBERON:0001242,1.10e-31,13;UBERON:0001262,1.10e-31,13;UBERON:0004786,1.10e-31,13;UBERON:0000160,2.74e-28,31;UBERON:0004923,3.88e-24,24;UBERON:0005409,2.34e-20,47;UBERON:0003350,5.80e-17,9;UBERON:0004808,5.80e-17,9;UBERON:0001277,5.80e-17,9;UBERON:0000485,8.54e-14,11;UBERON:0000331,9.82e-14,3;UBERON:0002116,9.82e-14,3;UBERON:0001204,9.82e-14,3;UBERON:0001168,9.82e-14,3;UBERON:0002108,1.99e-10,4;UBERON:0001962,5.51e-10,2;UBERON:0001961,5.51e-10,2;UBERON:0001744,5.51e-10,2;UBERON:0001155,3.56e-09,2;UBERON:0000059,3.56e-09,2;UBERON:0001007,5.41e-09,116;UBERON:0001555,5.41e-09,116;UBERON:0007026,5.41e-09,116;UBERON:0004119,8.65e-09,118;UBERON:0000925,8.65e-09,118;UBERON:0006595,8.65e-09,118;UBERON:0002465,6.37e-07,3;UBERON:0004921,8.44e-07,114 | |||
|phase1_expression=0,8.02643437570531,6.3699893514535,27.2217790176147,13.5241847085514,1.6787927191189,0.934450562382103,0.129123323441576,0.140788722151667,0,0.171217968225505,0.319088635981346,0,0,0,0.202475267389826,0.699561878128147,0.157731082679119,0.137114433605739,0,0,0,0,8.31960598525715,8.48814339948529,9.18771142584032,6.8921919385452,6.03319451520489,16.3420140732482,5.29263272495855,2.66076612786366,0,0,0,0.577703239502549,1.16364251750945,0.408338712524738,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0,0,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0.259786004602869,0.35333957451034,0,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,1.53274233125155,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,1.32225283331772,0,0,0.128867461322093,0,0.444756087689741,0.570676878337677,0.474529061544512,0.164698954724011,0.502670417600539,0,0.19496408711912,1.79763881730844,0.432276099749388,1.99141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0,0.26175594198403,1.03691978633434,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.503653849092235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,8.02643437570531,6.3699893514535,27.2217790176147,13.5241847085514,1.6787927191189,0.934450562382103,0.129123323441576,0.140788722151667,0,0.171217968225505,0.319088635981346,0,0,0,0.202475267389826,0.699561878128147,0.157731082679119,0.137114433605739,0,0,0,0,8.31960598525715,8.48814339948529,9.18771142584032,6.8921919385452,6.03319451520489,16.3420140732482,5.29263272495855,2.66076612786366,0,0,0,0.577703239502549,1.16364251750945,0.408338712524738,0,0,0,0,0,0,0,0.101376931219515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0,0,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,0,0,0.259786004602869,0.35333957451034,0,0,0,0,0.216491041011214,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.72783522436244,0,0,1.53274233125155,0,0,0.127070227073065,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0.175951124163949,0,0,0,0,0,0,0.257347907114715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65209391491899,1.32225283331772,0,0,0.128867461322093,0,0.444756087689741,0.570676878337677,0.474529061544512,0.164698954724011,0.502670417600539,0,0.19496408711912,1.79763881730844,0.432276099749388,1.99141273254367,0,0,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163934945376675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269728692769641,0,0.26175594198403,1.03691978633434,0,0,0.149516546043979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0897138566094757,0.503653849092235,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0.342869252385415,0,0,0.145346416632329,0.0941093804153306,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p6@Fau | |||
}} | }} |
Latest revision as of 02:19, 26 September 2015
Short description: | p6@Fau |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Fau_5end |
Coexpression cluster: | MCL_coexpression_mm9:550 |
Association with transcript: | 268bp_to_NM_001190436, uc008ggu.2_5end |
EntrezGene: | Fau |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.14e-18 | 6 |
gut absorptive cell | 2.14e-18 | 6 |
enterocyte | 2.14e-18 | 6 |
intestinal epithelial cell | 5.80e-17 | 9 |
epithelial cell of alimentary canal | 5.80e-17 | 9 |
columnar/cuboidal epithelial cell | 9.54e-16 | 7 |
M cell of gut | 6.61e-14 | 3 |
epithelial cell | 7.06e-13 | 25 |
endo-epithelial cell | 5.52e-10 | 15 |
endodermal cell | 2.34e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
mucosa | 9.18e-40 | 15 |
intestinal mucosa | 1.10e-31 | 13 |
wall of intestine | 1.10e-31 | 13 |
gastrointestinal system mucosa | 1.10e-31 | 13 |
intestine | 2.74e-28 | 31 |
organ component layer | 3.88e-24 | 24 |
gastrointestinal system | 2.34e-20 | 47 |
epithelium of mucosa | 5.80e-17 | 9 |
gastrointestinal system epithelium | 5.80e-17 | 9 |
intestinal epithelium | 5.80e-17 | 9 |
simple columnar epithelium | 8.54e-14 | 11 |
ileal mucosa | 9.82e-14 | 3 |
ileum | 9.82e-14 | 3 |
mucosa of small intestine | 9.82e-14 | 3 |
wall of small intestine | 9.82e-14 | 3 |
small intestine | 1.99e-10 | 4 |
gut-associated lymphoid tissue | 5.51e-10 | 2 |
mucosa-associated lymphoid tissue | 5.51e-10 | 2 |
lymphoid tissue | 5.51e-10 | 2 |
colon | 3.56e-09 | 2 |
large intestine | 3.56e-09 | 2 |
digestive system | 5.41e-09 | 116 |
digestive tract | 5.41e-09 | 116 |
primitive gut | 5.41e-09 | 116 |
endoderm-derived structure | 8.65e-09 | 118 |
endoderm | 8.65e-09 | 118 |
presumptive endoderm | 8.65e-09 | 118 |
lymphoid system | 6.37e-07 | 3 |
subdivision of digestive tract | 8.44e-07 | 114 |