Personal tools

FFCP PHASE1:Mm9::chr4:106987004..106987029,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=230584
|EntrezGene=230584
|HGNC=
|HGNC=
|MCL_coexpression_id=1344
|MCL_coexpression_id=1344
|TSSclassifier=NA
|UniProt=A2A8S2
|UniProt=A2A8S2
|association_with_transcript=0bp_to_ENSMUST00000128284_5end
|association_with_transcript=0bp_to_ENSMUST00000128284_5end
|cluster_id=chr4:106987004..106987029,+
|description=CAGE_peak_2_at_Yipf1_5end
|description=CAGE_peak_2_at_Yipf1_5end
|id=chr4:106987004..106987029,+
|id=chr4:106987004..106987029,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000066,7.69e-07,25
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000160!1.22e-09!43;UBERON:0000344!1.43e-08!15;UBERON:0001242!1.45e-07!13;UBERON:0000060!1.45e-07!13;UBERON:0001262!1.45e-07!13;UBERON:0004786!1.45e-07!13;UBERON:0005409!2.41e-07!59
|ontology_enrichment_uberon=UBERON:0000160!1.22e-09!43;UBERON:0000344!1.43e-08!15;UBERON:0001242!1.45e-07!13;UBERON:0000060!1.45e-07!13;UBERON:0001262!1.45e-07!13;UBERON:0004786!1.45e-07!13;UBERON:0005409!2.41e-07!59
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.25e-12,31;UBERON:0000344,1.18e-08,15;UBERON:0005409,1.98e-08,47;UBERON:0001242,1.22e-07,13;UBERON:0001262,1.22e-07,13;UBERON:0004786,1.22e-07,13;UBERON:0003104,7.77e-07,61;UBERON:0009142,7.77e-07,61
|phase1_expression=1.60148847104794,9.07336059862339,16.8349718574128,3.93203474698879,6.51164448930251,6.5472916045637,4.20502753071946,0.387369970324729,0.422366166455,0.70219357896598,0,0.239316476986009,0,0.611942816932982,0.333109761815663,0,0.699561878128147,0.788655413395594,0.548457734422955,2.12194825899015,2.38121212422995,1.19149141441062,1.30599894569468,6.23970448894286,10.0940083669555,16.6527269593356,13.7843838770904,10.7735616342945,16.5320374927045,12.6015064879965,13.082100128663,1.90509202037889,0.61506478758457,15.8481681015439,5.19932915552294,5.48574329683025,3.47087905646027,4.60384793810598,5.4693474116666,4.71171369576418,6.47054636834116,7.5135003345429,2.91306211818692,2.51793635951155,2.12891555560981,3.12029478674859,5.47673941043627,2.39827672018491,5.05278220289285,5.24960727500565,4.75953833526233,1.43752564364972,1.51004345451963,0,0,3.34437266846731,2.86533439938757,5.67239301505187,0.202316460859598,1.05798195854407,1.26766280701236,4.40497891689872,4.4464739805557,1.3498495759221,3.9554654502679,1.4209602298922,2.09720077362883,5.76327457982332,0.725827286159344,0.270011876663381,0.210324961351382,2.57085885963423,1.98781686856452,0,0.191690942036473,0.919218786610021,1.10115880999389,1.14918604276669,1.38245879930619,1.58263545276233,1.37231465403614,1.04182674111352,1.3959149950069,4.50210088025344,2.29197371665215,1.76777151284201,1.13897344639282,1.1183966749518,1.36307147999731,1.96486056277642,1.44932244350839,6.0229671388697,4.75979933595425,8.09554787456726,14.2950811838487,13.4408066129201,2.10666630197628,2.72688516124892,2.59786004602869,1.41335829804136,1.97180787687353,2.56652954828636,0,0,3.030874574157,3.04031838570118,3.53867111510348,2.74041311325744,2.58937883647172,1.48442139064825,2.08182392119363,2.43572382649713,1.15307748628029,2.71300752994721,1.99900802130698,2.38766523526383,3.70792451601561,1.87979163995885,0.884610551949874,2.75003644910596,1.54589062922275,0.969750506270444,29.8226817948995,1.46390398505774,1.67557365450764,14.8165092020983,1.67741174308288,1.19980546198682,1.65191295194984,1.64769703345305,0,0.879580464790051,0.695297280769106,0.511430914660661,1.66230435647648,1.78465389374533,1.32391173005411,2.23932547098167,4.0435641349388,3.78795340595653,1.69156575851515,2.06911893990126,1.62055916824814,2.26057226753573,1.42876648217788,3.07472928683639,1.78033276663485,1.81092359517311,0.431135985865684,0.756424320671277,1.05570674498369,0.876782929710299,1.11218899690239,0.696504333044333,1.64625709126355,2.38841120182192,2.1066395619397,2.05878325691772,1.42081749697796,1.86413195281952,0.938104239924385,1.62055855314913,0.946978942340841,0.590292695242212,0.771335564436891,1.39520366850245,1.07309360559848,1.5179494507732,1.31647879930784,1.80584210487005,0.891756905004413,1.31579988682799,1.09775057645525,1.74468344388483,1.89260953707715,0.514523061896422,18.5034518470927,2.90895623329899,0.853153002140936,0.464473343720877,1.41754207454303,1.81515172161008,5.55945109612176,12.1744400712038,8.54152310780121,24.0460473897056,14.3261069016154,14.523822459004,13.4525220112193,8.08937467788799,17.0749059401008,18.3209971394018,1.70701110857774,2.51346727741403,2.25415471346161,2.03651327845314,2.32742984601151,2.17421041659988,2.08680572510049,3.39503340353085,5.49495547444812,5.42947521255922,9.19003143970162,0.500535317148282,0.982794975566015,0.449724224769707,1.82574109249653,1.68824011826692,1.52775511068852,1.15078454980324,3.08056930872567,7.13859674289012,2.87536413054709,7.81495990103857,5.92871578917665,7.32478746046624,8.25228102200796,10.6137574699941,2.58654466233247,1.70542270593436,0.977789858652155,1.18821560042632,1.64283173801951,2.01007508930179,2.38043640886014,2.34160377429359,1.41871629695572,1.99318220683897,0.956728611944923,2.78567635016755,2.41758974612254,2.89298117163023,3.01582567878545,4.89515115436839,0.983528546038072,1.37968373152366,2.88991061978026,1.75817529888305,1.63934945376675,1.51482556322624,0.315508219416257,1.56175497718655,1.72338718186239,1.67278158566786,2.67358408898873,1.69845918473299,3.23848561339915,3.21481443702443,0.790575555893047,0.321321316421807,3.83238230062325,1.6025904330053,2.11753047159649,3.95928295134085,5.30980553359851,2.42780636154981,1.81394134178851,3.20628635585027,1.18120757152309,1.22974059177571,5.16856586336442,1.45413491791002,1.78248689192361,1.58018378967908,1.05418608574999,0,2.04263763452273,2.16073312837572,1.55230420539305,1.50035924522115,1.77340233642274,1.42695054081656,1.97458824722545,1.8267896946876,2.11204537257339,4.02480934641258,9.04166432025344,1.31909002353184,0.807322133479528,0.844380948994182,1.55184047204077,1.31312719796049,8.45294426226567,2.59595422814714,0.683483523191411,0.82554747185289,0.555583582109135,1.13021074202815,0.27338845544205,0.915112692826091,1.35982743995084,0.839708713941948,0.552799895217695,9.54670618015114,0.790839983952838,1.21991680276109,1.72808545314882,1.67270636811575,4.36725127492355,3.10187996685088,3.88471241909079,5.49687478166462,30.9779786167385,8.07741107013003,1.12738587736838,2.99033092087958,1.98550188548517,1.55560950675238,1.93739735216597,2.02747350588934,2.11243029562357,2.0832701575032,5.03324853243412,1.44950472495604,2.01621004380506,1.89606672376907,1.41907650703115,0.616265742988964,1.42912905275575,0.895133478337407,0.596044064343795,1.08175904567972,0.886137163047463,0.807731599585181,0.762068066549998,0.806609481094724,1.36441033035653,0.865906574762965,0.818138315270983,0.906921534460845,3.32978930061097,2.42227412845584,1.84673078000486,2.70465431645067,3.19060208267009,1.64836461840539,1.50057865355346,6.52043735245972,1.12950368523413,0.460325236507177,0.572895513439397,1.20297227640581,1.37016503954128,0,0.675022500231806,0,0.906284817968409,1.03552062350364,0.62272408550506,0.399024873401031,1.02440163452481,0.729320151204882,0.209613162627982,0.551530525350042,2.00022055021454,1.44224540067226,2.88827288632634,2.02157769411038,0.760437899670719,1.50901073108861,1.12369808963859,0.960377286073039,1.20614484806788,0.476293691283074,0.579421629724277,1.15745532278223,1.23625770240992,2.20798380201596,2.05721551431249,0.887379030796687,1.66905332963125,1.16277133305863,1.03520318456864,1.35383372626682,1.28049581010941,1.05227884575137,1.35804113845862,0.561142271657738,1.30498519936592,0.689531376628944,1.63692417267876,1.23949472948773,1.54325288784913,1.24905288968973,2.33931608445408,2.36358159453128,1.3390183244819,1.32354851471709,1.39120701372253
|phase1_expression=1.60148847104794,9.07336059862339,16.8349718574128,3.93203474698879,6.51164448930251,6.5472916045637,4.20502753071946,0.387369970324729,0.422366166455,0.70219357896598,0,0.239316476986009,0,0.611942816932982,0.333109761815663,0,0.699561878128147,0.788655413395594,0.548457734422955,2.12194825899015,2.38121212422995,1.19149141441062,1.30599894569468,6.23970448894286,10.0940083669555,16.6527269593356,13.7843838770904,10.7735616342945,16.5320374927045,12.6015064879965,13.082100128663,1.90509202037889,0.61506478758457,15.8481681015439,5.19932915552294,5.48574329683025,3.47087905646027,4.60384793810598,5.4693474116666,4.71171369576418,6.47054636834116,7.5135003345429,2.91306211818692,2.51793635951155,2.12891555560981,3.12029478674859,5.47673941043627,2.39827672018491,5.05278220289285,5.24960727500565,4.75953833526233,1.43752564364972,1.51004345451963,0,0,3.34437266846731,2.86533439938757,5.67239301505187,0.202316460859598,1.05798195854407,1.26766280701236,4.40497891689872,4.4464739805557,1.3498495759221,3.9554654502679,1.4209602298922,2.09720077362883,5.76327457982332,0.725827286159344,0.270011876663381,0.210324961351382,2.57085885963423,1.98781686856452,0,0.191690942036473,0.919218786610021,1.10115880999389,1.14918604276669,1.38245879930619,1.58263545276233,1.37231465403614,1.04182674111352,1.3959149950069,4.50210088025344,2.29197371665215,1.76777151284201,1.13897344639282,1.1183966749518,1.36307147999731,1.96486056277642,1.44932244350839,6.0229671388697,4.75979933595425,8.09554787456726,14.2950811838487,13.4408066129201,2.10666630197628,2.72688516124892,2.59786004602869,1.41335829804136,1.97180787687353,2.56652954828636,0,0,3.030874574157,3.04031838570118,3.53867111510348,2.74041311325744,2.58937883647172,1.48442139064825,2.08182392119363,2.43572382649713,1.15307748628029,2.71300752994721,1.99900802130698,2.38766523526383,3.70792451601561,1.87979163995885,0.884610551949874,2.75003644910596,1.54589062922275,0.969750506270444,29.8226817948995,1.46390398505774,1.67557365450764,14.8165092020983,1.67741174308288,1.19980546198682,1.65191295194984,1.64769703345305,0,0.879580464790051,0.695297280769106,0.511430914660661,1.66230435647648,1.78465389374533,1.32391173005411,2.23932547098167,4.0435641349388,3.78795340595653,1.69156575851515,2.06911893990126,1.62055916824814,2.26057226753573,1.42876648217788,3.07472928683639,1.78033276663485,1.81092359517311,0.431135985865684,0.756424320671277,1.05570674498369,0.876782929710299,1.11218899690239,0.696504333044333,1.64625709126355,2.38841120182192,2.1066395619397,2.05878325691772,1.42081749697796,1.86413195281952,0.938104239924385,1.62055855314913,0.946978942340841,0.590292695242212,0.771335564436891,1.39520366850245,1.07309360559848,1.5179494507732,1.31647879930784,1.80584210487005,0.891756905004413,1.31579988682799,1.09775057645525,1.74468344388483,1.89260953707715,0.514523061896422,18.5034518470927,2.90895623329899,0.853153002140936,0.464473343720877,1.41754207454303,1.81515172161008,5.55945109612176,12.1744400712038,8.54152310780121,24.0460473897056,14.3261069016154,14.523822459004,13.4525220112193,8.08937467788799,17.0749059401008,18.3209971394018,1.70701110857774,2.51346727741403,2.25415471346161,2.03651327845314,2.32742984601151,2.17421041659988,2.08680572510049,3.39503340353085,5.49495547444812,5.42947521255922,9.19003143970162,0.500535317148282,0.982794975566015,0.449724224769707,1.82574109249653,1.68824011826692,1.52775511068852,1.15078454980324,3.08056930872567,7.13859674289012,2.87536413054709,7.81495990103857,5.92871578917665,7.32478746046624,8.25228102200796,10.6137574699941,2.58654466233247,1.70542270593436,0.977789858652155,1.18821560042632,1.64283173801951,2.01007508930179,2.38043640886014,2.34160377429359,1.41871629695572,1.99318220683897,0.956728611944923,2.78567635016755,2.41758974612254,2.89298117163023,3.01582567878545,4.89515115436839,0.983528546038072,1.37968373152366,2.88991061978026,1.75817529888305,1.63934945376675,1.51482556322624,0.315508219416257,1.56175497718655,1.72338718186239,1.67278158566786,2.67358408898873,1.69845918473299,3.23848561339915,3.21481443702443,0.790575555893047,0.321321316421807,3.83238230062325,1.6025904330053,2.11753047159649,3.95928295134085,5.30980553359851,2.42780636154981,1.81394134178851,3.20628635585027,1.18120757152309,1.22974059177571,5.16856586336442,1.45413491791002,1.78248689192361,1.58018378967908,1.05418608574999,0,2.04263763452273,2.16073312837572,1.55230420539305,1.50035924522115,1.77340233642274,1.42695054081656,1.97458824722545,1.8267896946876,2.11204537257339,4.02480934641258,9.04166432025344,1.31909002353184,0.807322133479528,0.844380948994182,1.55184047204077,1.31312719796049,8.45294426226567,2.59595422814714,0.683483523191411,0.82554747185289,0.555583582109135,1.13021074202815,0.27338845544205,0.915112692826091,1.35982743995084,0.839708713941948,0.552799895217695,9.54670618015114,0.790839983952838,1.21991680276109,1.72808545314882,1.67270636811575,4.36725127492355,3.10187996685088,3.88471241909079,5.49687478166462,30.9779786167385,8.07741107013003,1.12738587736838,2.99033092087958,1.98550188548517,1.55560950675238,1.93739735216597,2.02747350588934,2.11243029562357,2.0832701575032,5.03324853243412,1.44950472495604,2.01621004380506,1.89606672376907,1.41907650703115,0.616265742988964,1.42912905275575,0.895133478337407,0.596044064343795,1.08175904567972,0.886137163047463,0.807731599585181,0.762068066549998,0.806609481094724,1.36441033035653,0.865906574762965,0.818138315270983,0.906921534460845,3.32978930061097,2.42227412845584,1.84673078000486,2.70465431645067,3.19060208267009,1.64836461840539,1.50057865355346,6.52043735245972,1.12950368523413,0.460325236507177,0.572895513439397,1.20297227640581,1.37016503954128,0,0.675022500231806,0,0.906284817968409,1.03552062350364,0.62272408550506,0.399024873401031,1.02440163452481,0.729320151204882,0.209613162627982,0.551530525350042,2.00022055021454,1.44224540067226,2.88827288632634,2.02157769411038,0.760437899670719,1.50901073108861,1.12369808963859,0.960377286073039,1.20614484806788,0.476293691283074,0.579421629724277,1.15745532278223,1.23625770240992,2.20798380201596,2.05721551431249,0.887379030796687,1.66905332963125,1.16277133305863,1.03520318456864,1.35383372626682,1.28049581010941,1.05227884575137,1.35804113845862,0.561142271657738,1.30498519936592,0.689531376628944,1.63692417267876,1.23949472948773,1.54325288784913,1.24905288968973,2.33931608445408,2.36358159453128,1.3390183244819,1.32354851471709,1.39120701372253
|short_description=p2@Yipf1
|short_description=p2@Yipf1
}}
}}

Latest revision as of 02:56, 26 September 2015

Short description:p2@Yipf1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Yipf1_5end
Coexpression cluster:MCL_coexpression_mm9:1344
Association with transcript: 0bp_to_ENSMUST00000128284_5end
EntrezGene:Yipf1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Yipf1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.60
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I59.07
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I616.83
CD326+ enterocyte, pool1.CNhs13542.11848-124I33.93
CD326+ enterocyte, pool2.CNhs13197.11849-124I46.51
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I84.21
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.39
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.42
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.70
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.24
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.61
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.79
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.55
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A62.12
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H21.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I91.31
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D16.24
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D210.09
GP2+ M cell, pool1.CNhs13228.11845-124H916.65
GP2+ M cell, pool2.CNhs13231.11846-124I113.78
GP2+ M cell, pool3.CNhs13240.11847-124I210.77
Ileum epithelium, pool1.CNhs13199.10252-104B916.53
Ileum epithelium, pool2.CNhs13232.10253-104C112.60
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C813.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I31.91
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F55.20
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F73.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.60
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H15.47
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.71
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G96.47
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H27.51
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H42.91
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D82.52
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.13
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B33.12
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B75.48
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.40
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B85.05
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C35.25
Mouse Astrocytes, donor2.CNhs12078.11552-120C44.76
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A21.51
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.34
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.87
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C55.67
Mouse Granule cells, donor1.CNhs12131.11713-123C30.20
Mouse Granule cells, donor2.CNhs12357.11731-123E31.06
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D14.45
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C71.35
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E73.96
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C82.10
Mouse Microglia, donor2.CNhs12634.11736-123E85.76
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D51.99
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.15
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.37
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.04
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E54.50
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.29
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.14
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D91.36
Mouse Schwann, donor2.CNhs12573.11746-123F91.96
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C88.10
Mouse hepatocyte, donor6.CNhs13090.11822-124F414.30
Mouse hepatocyte, donor8.CNhs13091.11824-124F613.44
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.11
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I72.73
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E32.60
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.41
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.97
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H12.57
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G13.03
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G23.04
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.54
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.74
accessory axillary lymph node, adult.CNhs10475.1063-29H92.59
adrenal gland, adult.CNhs10508.49-24D71.48
adrenal gland, embryo E14.CNhs11038.406-44C52.08
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F52.71
adrenal gland, neonate N00.CNhs11191.1311-23C12.00
adrenal gland, neonate N25.CNhs11223.1377-27I32.39
amnion, adult pregnant day17.5.CNhs10488.583-22A83.71
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F52.75
bone (os femoris), neonate N16.CNhs11225.1525-43A61.55
bone (os femoris), neonate N20.CNhs11195.1350-25C30.97
cecum, adult.CNhs10467.37-13H429.82
cerebellum, adult.CNhs10494.15-8B21.46
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H714.82
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C71.68
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D41.65
corpora quadrigemina, adult.CNhs10501.16-22A41.65
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A22.24
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G43.79
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E22.07
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D42.26
eyeball, neonate N00.CNhs11207.633-15C61.43
eyeball, neonate N01.CNhs11140.1532-43E73.07
eyeball, neonate N02.CNhs11205.1551-44G81.78
eyeball, neonate N16.CNhs11188.777-19A21.81
forelimb, embryo E11.CNhs10596.335-25E20.43
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B51.65
gonad, embryo E13.CNhs11044.1564-45I62.39
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.11
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D22.06
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.42
heart, embryo E11.CNhs10586.331-24E91.86
heart, embryo E12.CNhs11015.353-12F50.94
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.77
heart, embryo E17.CNhs11025.479-18E51.40
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E31.52
heart, neonate N03.CNhs11221.1349-25I21.32
heart, neonate N10.CNhs11118.749-24G11.81
heart, neonate N16.CNhs11209.782-15G10.89
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E81.89
hippocampus, neonate N00.CNhs11228.627-43G10.51
intestinal mucosa, adult.CNhs10506.860-29I318.50
intestine, adult.CNhs10496.178-9A32.91
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D81.42
intestine, embryo E16.CNhs10585.463-22H41.82
intestine, embryo E17.CNhs10582.482-18D35.56
intestine, embryo E18.CNhs10526.1289-20F712.17
intestine, neonate N00.CNhs11126.644-26D18.54
intestine, neonate N01.CNhs11192.1322-23E924.05
intestine, neonate N06.CNhs11102.688-20B814.33
intestine, neonate N07.CNhs11095.720-20F214.52
intestine, neonate N10.CNhs11098.755-23A513.45
intestine, neonate N20.CNhs11187.827-18D18.09
intestine, neonate N25.CNhs11121.1352-25E317.07
intestine, neonate N30.CNhs11131.1384-42G118.32
kidney, embryo E14.CNhs10606.411-4I91.71
kidney, embryo E15.CNhs10997.434-16F82.51
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.04
kidney, embryo E18.CNhs11001.1288-20C72.33
kidney, neonate N00.CNhs11214.646-21G72.17
kidney, neonate N10.CNhs11206.758-6D52.09
kidney, neonate N20.CNhs11113.832-19I13.40
kidney, neonate N25.CNhs11122.1353-25F35.49
kidney, neonate N30.CNhs11203.1385-42H15.43
liver, adult pregnant day01.CNhs10466.508-5B29.19
liver, embryo E12.CNhs10601.355-15F80.50
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E10.45
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F51.69
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G41.15
liver, neonate N00.CNhs11117.641-24F43.08
liver, neonate N03.CNhs11123.1345-25G27.14
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H27.81
liver, neonate N10.CNhs11115.751-24B95.93
liver, neonate N20.CNhs11220.823-25A37.32
liver, neonate N25.CNhs11198.1368-26H18.25
liver, neonate N30.CNhs11106.1382-42D110.61
lung, adult.CNhs10474.28-22B12.59
lung, embryo E12.CNhs10522.354-16G21.71
lung, embryo E14.CNhs10604.404-26F80.98
lung, embryo E15.CNhs11020.432-17C51.19
lung, embryo E16.CNhs10998.458-17B61.64
lung, embryo E17.CNhs10605.480-44A62.01
lung, embryo E18.CNhs10583.1287-20I62.38
lung, neonate N00.CNhs11224.640-42C62.34
lung, neonate N06.CNhs11212.683-20E51.42
lung, neonate N07.CNhs11111.715-19A31.99
lung, neonate N10.CNhs11219.750-23E60.96
lung, neonate N20.CNhs11109.822-18A42.79
lung, neonate N25.CNhs11119.1359-25C72.42
lung, neonate N30.CNhs11133.1394-42H22.89
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A14.90
mammary gland, adult lactating day02.CNhs10480.595-22B60.98
mammary gland, adult pregnant day19.CNhs10476.588-5H21.38
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.64
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.51
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.67
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D43.24
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.32
ovary, adult.CNhs10507.91-2I73.83
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G63.96
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F42.43
pancreas, embryo E15.CNhs11042.1556-45F21.81
pancreas, embryo E16.CNhs11003.460-26E53.21
pancreas, embryo E17.CNhs10599.1558-45G31.18
pancreas, embryo E18.CNhs10580.1535-43I71.23
pancreas, neonate N00.CNhs11105.645-26G95.17
pancreas, neonate N01.CNhs11138.1531-43D71.45
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.58
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E62.16
pituitary gland, embryo E13.CNhs11009.370-44C71.55
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B91.77
pituitary gland, embryo E16.CNhs11036.449-43F61.43
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E91.83
placenta, adult pregnant day10.CNhs10472.539-13I72.11
placenta, adult pregnant day17.CNhs10464.577-18G34.02
prostate, adult.CNhs10470.859-1F89.04
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G40.81
skin, neonate N03.CNhs11215.662-22H30.84
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C41.31
small intestine, neonate N16.CNhs11114.790-21I18.45
spinal cord, adult.CNhs10505.24-13C92.60
spleen, adult.CNhs10465.25-2G20.68
spleen, embryo E16.CNhs11035.461-43C10.83
spleen, embryo E18.CNhs11011.1271-21F20.56
spleen, neonate N10.CNhs11116.752-24D11.13
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.92
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C61.36
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H69.55
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G81.22
stomach, embryo E16.CNhs11022.459-17D41.73
stomach, embryo E17.CNhs11006.1035-18D51.67
stomach, embryo E18.CNhs10999.1286-20C64.37
stomach, neonate N03.CNhs11193.1340-24B83.10
stomach, neonate N07.CNhs11210.718-18A93.88
stomach, neonate N25.CNhs11104.1355-25E45.50
stomach, neonate N30.CNhs11134.1386-42I130.98
submandibular gland, adult.CNhs10469.59-29C18.08
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F52.99
testis, embryo E15.CNhs11034.443-27C51.99
testis, embryo E16.CNhs11033.470-26G51.56
testis, embryo E17.CNhs11029.486-18I51.94
testis, embryo E18.CNhs11027.503-18G52.03
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I42.08
testis, neonate N10.CNhs11204.763-44D95.03
testis, neonate N20.CNhs11110.839-18H31.45
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I41.42
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C51.43
thymus, embryo E17.CNhs10581.478-18C10.90
thymus, embryo E18.CNhs10595.1273-19G40.60
thymus, neonate N02.CNhs11181.1541-43F81.08
thymus, neonate N03.CNhs11137.2104-43C70.89
thymus, neonate N06.CNhs11197.681-26C40.81
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.81
thymus, neonate N20.CNhs11186.820-7A21.36
thymus, neonate N25.CNhs11125.1362-25G70.87
thymus, neonate N30.CNhs11132.1393-42G20.82
tongue, adult.CNhs10499.32-1B40.91
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H33.33
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F72.42
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G51.85
urinary bladder, adult.CNhs10481.879-12E42.70
uterus, adult pregnant day19.CNhs10497.590-15F53.19
uterus, adult.CNhs10509.92-27E51.65
vagina, adult.CNhs10502.89-27D51.50
vesicular gland, adult.CNhs10491.51-27F86.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.20
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.00
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C90.40
whole body, embryo E13.CNhs10512.372-23H21.02
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.21
whole body, embryo E16.CNhs10514.453-14F20.55
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.44
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.02
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.12
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.21
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.04
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.35
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.30
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B32.34
whole body, neonate N00.CNhs10525.657-19C22.36
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
epithelial cell7.69e-0725

Uber anatomy
Ontology termp-valuen
intestine2.25e-1231
mucosa1.18e-0815
gastrointestinal system1.98e-0847
intestinal mucosa1.22e-0713
wall of intestine1.22e-0713
gastrointestinal system mucosa1.22e-0713
mesenchyme7.77e-0761
entire embryonic mesenchyme7.77e-0761
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:106987004..106987029,%2B&oldid=4229099"