FFCP PHASE1:Mm9::chr4:107356135..107356179,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56296 | |EntrezGene=56296 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=0 | |MCL_coexpression_id=0 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=2bp_to_uc008tzx.2_5end | |association_with_transcript=2bp_to_uc008tzx.2_5end | ||
|cluster_id=chr4:107356135..107356179,- | |||
|description=CAGE_peak_1_at_Dmrtb1_5end | |description=CAGE_peak_1_at_Dmrtb1_5end | ||
|id=chr4:107356135..107356179,- | |id=chr4:107356135..107356179,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004176!7.84e-25!17;UBERON:0009196!7.84e-25!17;UBERON:0009117!7.84e-25!17;UBERON:0000991!2.01e-23!18;UBERON:0005564!2.01e-23!18;UBERON:0003133!4.73e-22!24;UBERON:0003135!8.16e-22!15;UBERON:0003101!1.99e-20!16;UBERON:0000079!1.99e-20!16;UBERON:0005156!2.68e-20!26;UBERON:0000990!2.68e-20!26;UBERON:0000473!2.52e-17!14;UBERON:0003886!1.22e-13!38;UBERON:0002553!2.87e-13!39;UBERON:0002323!4.53e-11!37;UBERON:0004458!4.53e-11!37;UBERON:0001301!5.56e-10!3;UBERON:0006555!5.56e-10!3;UBERON:0005103!5.56e-10!3;UBERON:0000083!5.56e-10!3;UBERON:0009201!5.56e-10!3;UBERON:0004819!5.56e-10!3;UBERON:0006553!5.56e-10!3;UBERON:0003074!5.56e-10!3;UBERON:0003060!5.56e-10!3;UBERON:0000992!8.39e-10!3;UBERON:0000464!8.44e-09!57;UBERON:0000080!1.05e-07!4;UBERON:0005904!1.05e-07!4;UBERON:0006947!1.05e-07!4;UBERON:0002120!1.05e-07!4;UBERON:0004054!1.05e-07!4;UBERON:0004875!1.05e-07!4;UBERON:0004876!1.05e-07!4;UBERON:0005721!1.05e-07!4;UBERON:0005754!1.05e-07!4;UBERON:0007297!1.05e-07!4 | |ontology_enrichment_uberon=UBERON:0004176!7.84e-25!17;UBERON:0009196!7.84e-25!17;UBERON:0009117!7.84e-25!17;UBERON:0000991!2.01e-23!18;UBERON:0005564!2.01e-23!18;UBERON:0003133!4.73e-22!24;UBERON:0003135!8.16e-22!15;UBERON:0003101!1.99e-20!16;UBERON:0000079!1.99e-20!16;UBERON:0005156!2.68e-20!26;UBERON:0000990!2.68e-20!26;UBERON:0000473!2.52e-17!14;UBERON:0003886!1.22e-13!38;UBERON:0002553!2.87e-13!39;UBERON:0002323!4.53e-11!37;UBERON:0004458!4.53e-11!37;UBERON:0001301!5.56e-10!3;UBERON:0006555!5.56e-10!3;UBERON:0005103!5.56e-10!3;UBERON:0000083!5.56e-10!3;UBERON:0009201!5.56e-10!3;UBERON:0004819!5.56e-10!3;UBERON:0006553!5.56e-10!3;UBERON:0003074!5.56e-10!3;UBERON:0003060!5.56e-10!3;UBERON:0000992!8.39e-10!3;UBERON:0000464!8.44e-09!57;UBERON:0000080!1.05e-07!4;UBERON:0005904!1.05e-07!4;UBERON:0006947!1.05e-07!4;UBERON:0002120!1.05e-07!4;UBERON:0004054!1.05e-07!4;UBERON:0004875!1.05e-07!4;UBERON:0004876!1.05e-07!4;UBERON:0005721!1.05e-07!4;UBERON:0005754!1.05e-07!4;UBERON:0007297!1.05e-07!4 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.63e-18,15;UBERON:0003101,2.23e-17,16;UBERON:0000079,2.23e-17,16;UBERON:0001301,3.97e-15,3;UBERON:0006555,3.97e-15,3;UBERON:0005103,3.97e-15,3;UBERON:0000083,3.97e-15,3;UBERON:0009201,3.97e-15,3;UBERON:0004819,3.97e-15,3;UBERON:0006553,3.97e-15,3;UBERON:0003074,3.97e-15,3;UBERON:0003060,3.97e-15,3;UBERON:0000473,4.52e-13,14;UBERON:0003133,1.12e-11,24;UBERON:0000080,1.33e-11,4;UBERON:0005904,1.33e-11,4;UBERON:0006947,1.33e-11,4;UBERON:0002120,1.33e-11,4;UBERON:0004054,1.33e-11,4;UBERON:0004875,1.33e-11,4;UBERON:0004876,1.33e-11,4;UBERON:0005721,1.33e-11,4;UBERON:0005754,1.33e-11,4;UBERON:0007297,1.33e-11,4;UBERON:0004176,7.68e-11,17;UBERON:0009196,7.68e-11,17;UBERON:0009117,7.68e-11,17;UBERON:0005156,8.51e-11,26;UBERON:0000990,8.51e-11,26;UBERON:0000991,2.92e-10,18;UBERON:0005564,2.92e-10,18;UBERON:0003886,1.93e-07,38;UBERON:0002553,2.98e-07,39;UBERON:0000058,5.00e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,379.888377104829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.7342137857179,0,0,0,0,0,0,0,0,0,0,58.6905141755968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23932547098167,4.29628689337247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.81443479676788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4641.44765712562,0,0,0,0,0,0.117357238645754,0,0.104859344425711,757.849387031181,1514.46177290386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,379.888377104829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,48.7342137857179,0,0,0,0,0,0,0,0,0,0,58.6905141755968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.23932547098167,4.29628689337247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.35613120733451,0.81443479676788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4641.44765712562,0,0,0,0,0,0.117357238645754,0,0.104859344425711,757.849387031181,1514.46177290386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p1@Dmrtb1 | |short_description=p1@Dmrtb1 | ||
}} | }} |
Latest revision as of 03:04, 26 September 2015
Short description: | p1@Dmrtb1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dmrtb1_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | 2bp_to_uc008tzx.2_5end |
EntrezGene: | Dmrtb1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 1.63e-18 | 15 |
male organism | 2.23e-17 | 16 |
male reproductive system | 2.23e-17 | 16 |
epididymis | 3.97e-15 | 3 |
excretory tube | 3.97e-15 | 3 |
mesonephric epithelium | 3.97e-15 | 3 |
mesonephric tubule | 3.97e-15 | 3 |
nephric duct | 3.97e-15 | 3 |
kidney epithelium | 3.97e-15 | 3 |
renal duct | 3.97e-15 | 3 |
mesonephric duct | 3.97e-15 | 3 |
pronephric duct | 3.97e-15 | 3 |
testis | 4.52e-13 | 14 |
reproductive organ | 1.12e-11 | 24 |
mesonephros | 1.33e-11 | 4 |
duct of male reproductive system | 1.33e-11 | 4 |
male genital duct | 1.33e-11 | 4 |
pronephros | 1.33e-11 | 4 |
internal male genitalia | 1.33e-11 | 4 |
nephrogenic cord | 1.33e-11 | 4 |
urogenital ridge | 1.33e-11 | 4 |
pronephric mesoderm | 1.33e-11 | 4 |
rostral part of nephrogenic cord | 1.33e-11 | 4 |
presumptive pronephric mesoderm | 1.33e-11 | 4 |
external genitalia | 7.68e-11 | 17 |
indifferent external genitalia | 7.68e-11 | 17 |
indifferent gonad | 7.68e-11 | 17 |
reproductive structure | 8.51e-11 | 26 |
reproductive system | 8.51e-11 | 26 |
gonad | 2.92e-10 | 18 |
gonad primordium | 2.92e-10 | 18 |
body cavity precursor | 1.93e-07 | 38 |
anatomical cavity | 2.98e-07 | 39 |
duct | 5.00e-07 | 7 |