FFCP PHASE1:Mm9::chr11:98569050..98569057,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr11:98569050..98569057,- to FFCP PHASE1:Mm9::chr11:98569050..98569057,-: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=23989 | |EntrezGene=23989 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1609 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-485bp_to_ENSMUST00000124371_5end | |||
|cluster_id=chr11:98569050..98569057,- | |||
|description=CAGE_peak_7_at_Med24_5end | |||
|id=chr11:98569050..98569057,- | |||
|ontology_enrichment_celltype=CL:0000068!9.88e-16!3;CL:0002202!9.88e-16!3;CL:0000069!9.88e-16!3;CL:0002632!9.88e-16!3;CL:0002368!9.88e-16!3;CL:0000307!9.88e-16!3;CL:0000377!9.88e-16!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.65e-52,3;CL:0002202,1.65e-52,3;CL:0000069,1.65e-52,3;CL:0002632,1.65e-52,3;CL:0002368,1.65e-52,3;CL:0000307,1.65e-52,3;CL:0000377,1.65e-52,3;CL:0002076,2.92e-11,15;CL:0000223,1.22e-08,20;CL:0000066,4.66e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003126!9.88e-16!3;UBERON:0001005!9.88e-16!3;UBERON:0007196!9.88e-16!3;UBERON:0001558!9.88e-16!3;UBERON:0000474!2.24e-13!9;UBERON:0003100!6.47e-11!11;UBERON:0003134!6.40e-10!8;UBERON:0004175!8.61e-09!9;UBERON:0005156!2.41e-08!26;UBERON:0000990!2.41e-08!26;UBERON:0000992!2.92e-07!3;UBERON:0001301!3.37e-07!3;UBERON:0006555!3.37e-07!3;UBERON:0005103!3.37e-07!3;UBERON:0000083!3.37e-07!3;UBERON:0009201!3.37e-07!3;UBERON:0004819!3.37e-07!3;UBERON:0006553!3.37e-07!3;UBERON:0003074!3.37e-07!3;UBERON:0003060!3.37e-07!3;UBERON:0003133!9.23e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003126,1.65e-52,3;UBERON:0001005,1.65e-52,3;UBERON:0007196,1.65e-52,3;UBERON:0001558,1.65e-52,3;UBERON:0005178,4.96e-10,17;UBERON:0005181,4.96e-10,17;UBERON:0002224,4.96e-10,17;UBERON:0000915,4.96e-10,17;UBERON:0008947,4.96e-10,17;UBERON:0003258,4.96e-10,17;UBERON:0004175,9.19e-09,9;UBERON:0003103,4.25e-07,43;UBERON:0001301,5.46e-07,3;UBERON:0006555,5.46e-07,3;UBERON:0005103,5.46e-07,3;UBERON:0000083,5.46e-07,3;UBERON:0009201,5.46e-07,3;UBERON:0004819,5.46e-07,3;UBERON:0006553,5.46e-07,3;UBERON:0003074,5.46e-07,3;UBERON:0003060,5.46e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94841936910093,4.05375784760158,2.02209778005913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,1.0108910337347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0,0.162886959353576,0.989820737835213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39563898241436,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0.188218760830661,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.94841936910093,4.05375784760158,2.02209778005913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,1.0108910337347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193952487167626,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.99358059645788,0,0.162886959353576,0.989820737835213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.39563898241436,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0640251524048693,0,0,0,0,0,0,0,0,0,0,0.188218760830661,0.0846146078916765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@Med24 | |||
}} | }} |
Latest revision as of 03:17, 26 September 2015
Short description: | p7@Med24 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Med24_5end |
Coexpression cluster: | MCL_coexpression_mm9:1609 |
Association with transcript: | -485bp_to_ENSMUST00000124371_5end |
EntrezGene: | Med24 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.65e-52 | 3 |
epithelial cell of tracheobronchial tree | 1.65e-52 | 3 |
branched duct epithelial cell | 1.65e-52 | 3 |
epithelial cell of lower respiratory tract | 1.65e-52 | 3 |
respiratory epithelial cell | 1.65e-52 | 3 |
tracheal epithelial cell | 1.65e-52 | 3 |
tracheoblast | 1.65e-52 | 3 |
endo-epithelial cell | 2.92e-11 | 15 |
endodermal cell | 1.22e-08 | 20 |
epithelial cell | 4.66e-07 | 25 |
Ontology term | p-value | n |
---|---|---|
trachea | 1.65e-52 | 3 |
respiratory airway | 1.65e-52 | 3 |
tracheobronchial tree | 1.65e-52 | 3 |
lower respiratory tract | 1.65e-52 | 3 |
thoracic cavity element | 4.96e-10 | 17 |
thoracic segment organ | 4.96e-10 | 17 |
thoracic cavity | 4.96e-10 | 17 |
thoracic segment of trunk | 4.96e-10 | 17 |
respiratory primordium | 4.96e-10 | 17 |
endoderm of foregut | 4.96e-10 | 17 |
internal genitalia | 9.19e-09 | 9 |
compound organ | 4.25e-07 | 43 |
epididymis | 5.46e-07 | 3 |
excretory tube | 5.46e-07 | 3 |
mesonephric epithelium | 5.46e-07 | 3 |
mesonephric tubule | 5.46e-07 | 3 |
nephric duct | 5.46e-07 | 3 |
kidney epithelium | 5.46e-07 | 3 |
renal duct | 5.46e-07 | 3 |
mesonephric duct | 5.46e-07 | 3 |
pronephric duct | 5.46e-07 | 3 |