FFCP PHASE1:Mm9::chr7:148286425..148286450,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr7:148286425..148286450,-
|short_description=p1@Sigirr
|description=CAGE_peak_1_at_Sigirr_5end
|association_with_transcript=0bp_to_ENSMUST00000097958,NM_02305...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=24058 | |EntrezGene=24058 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=297 | |||
|TSSclassifier=NA | |||
|UniProt=Q9JLZ8,Q3UKS3 | |UniProt=Q9JLZ8,Q3UKS3 | ||
|association_with_transcript=0bp_to_ENSMUST00000097958,NM_023059,uc009kjk.1,uc009kjl.1,uc009kjm.1_5end | |||
|cluster_id=chr7:148286425..148286450,- | |||
|description=CAGE_peak_1_at_Sigirr_5end | |||
|id=chr7:148286425..148286450,- | |||
|ontology_enrichment_celltype=CL:0002563!6.80e-07!9;CL:0002251!6.80e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,9.25e-09,9;CL:0002251,9.25e-09,9;CL:0000066,1.43e-07,25;CL:0002076,1.45e-07,15;CL:0000239,5.87e-07,6;CL:0000677,5.87e-07,6;CL:0000584,5.87e-07,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.02e-24!43;UBERON:0005409!6.50e-23!59;UBERON:0004119!3.49e-20!130;UBERON:0000925!3.49e-20!130;UBERON:0006595!3.49e-20!130;UBERON:0001007!1.91e-19!128;UBERON:0001555!1.91e-19!128;UBERON:0007026!1.91e-19!128;UBERON:0004921!4.01e-18!126;UBERON:0004185!4.01e-18!126;UBERON:0000344!3.32e-11!15;UBERON:0001242!9.50e-10!13;UBERON:0000060!9.50e-10!13;UBERON:0001262!9.50e-10!13;UBERON:0004786!9.50e-10!13;UBERON:0002108!2.58e-09!16;UBERON:0001045!2.18e-07!13;UBERON:0004923!2.30e-07!24;UBERON:0003350!6.80e-07!9;UBERON:0004808!6.80e-07!9;UBERON:0001277!6.80e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,3.47e-23,31;UBERON:0005409,1.43e-20,47;UBERON:0000344,1.45e-14,15;UBERON:0004119,5.23e-13,118;UBERON:0000925,5.23e-13,118;UBERON:0006595,5.23e-13,118;UBERON:0001242,1.33e-12,13;UBERON:0001262,1.33e-12,13;UBERON:0004786,1.33e-12,13;UBERON:0001007,2.71e-12,116;UBERON:0001555,2.71e-12,116;UBERON:0007026,2.71e-12,116;UBERON:0004921,4.75e-11,114;UBERON:0004923,2.52e-10,24;UBERON:0003350,9.25e-09,9;UBERON:0004808,9.25e-09,9;UBERON:0001277,9.25e-09,9;UBERON:0001264,1.78e-08,12;UBERON:0007023,7.65e-07,51 | |||
|phase1_expression=0.320297694209588,16.40184415905,14.1049764210756,9.37639055051173,12.0214975187123,10.4085148585372,10.7461814673942,0,0,0,0,0,0,0.262261207256992,0.333109761815663,0,0,0,0,0,2.38121212422995,0,0,13.9193407830264,14.4527847072317,17.2269589234506,11.630573896295,12.7128027284675,16.3420140732482,12.3494763582366,15.299405235216,0,0,0,4.33277429626912,6.15068187826422,7.35009682544529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,3.47837386442013,0.860423876981386,0,1.61910957491345,0,0,2.38755514223978,0,0,0,0.422530259330042,0,0,0,3.68034769719064,5.57391704045217,7.07734223020697,2.74041311325744,0.258937883647172,0,0,0,0,0,0.23517741427141,0,16.3148678704687,0,0,0,0,0,14.9113408974498,0,0,7.66371165625774,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.622034853050465,6.31806896084187,10.7325346502102,0,0,0,0,0.0680364991513279,0,0.281105173679186,5.95017752699736,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,10.9038198384653,9.25576983322405,0.213288250535234,0.696710015581316,2.44848176511977,6.85723983719365,9.33987784148455,15.5985013412299,9.49058123089023,13.8347121968169,11.5614196048124,7.56034593756373,10.3330966173134,6.29173586057955,9.07779809473716,9.55878111620963,0,0.571242563048644,1.1270773567308,1.4255592949172,2.13347735884388,3.22624771495465,4.17361145020098,6.34723636312289,5.33795674660674,7.89741849099523,0.296452627087149,0,0.393117990226406,0.449724224769707,0,0.72353147925725,1.01850340712568,0.863088412352432,0.486405680325106,1.92192989231657,1.43768206527355,0,0.624075346229121,0.757736633841335,1.79397413521912,0.964887042726734,3.32555742299888,0.189491411770485,0,0.678980343100753,0.704070744865506,1.84256883185997,2.38043640886014,2.14647012643579,0.945810864637146,1.55025282754142,1.91345722388985,2.78567635016755,1.89953480052485,1.3018415272336,0,0,12.2941068254759,6.07060841870411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.890328018336276,0.325773918707152,2.14461159864296,5.30980553359851,2.91336763385978,3.62788268357701,4.52652191414155,5.90603785761546,7.68587869859819,6.20227903603731,4.36240475373007,3.92147116223193,4.74055136903724,7.37930260024991,7.21948802737308,2.04263763452273,0.540183282093931,0.646793418913773,0.857348140126369,0.532020700926821,0.178368817602071,0.493647061806363,0,1.64270195644597,2.75381692122966,7.27743713581374,0.32977250588296,0.161464426695906,0.180938774784468,0.238744688006273,0,6.41257840585672,0,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0.276399947608848,6.68269432610579,0.316335993581135,0.609958401380546,2.48412283890143,2.71814784818809,3.27543845619266,3.50647300600534,3.2234847732881,5.23511883968059,10.3691978633434,6.83473244395618,0,0,0,0,0.258319646955462,0.168956125490778,0.117357238645754,0.39061315453185,0,0.483168241652012,0,0,0,0.102710957164827,0,0.179026695667481,0.198681354781265,0.240390899039938,0,0,0.228620419965,0,0,0.192423683280659,0.116876902181569,0.226730383615211,0.887943813496259,0.807424709485281,2.3503846290971,4.056981474676,4.31669693537719,3.84618410961257,1.07184189539533,5.517293144389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628839487883947,0.919217542250071,1.11123363900808,2.26638562962784,1.60459604795908,1.01078884705519,0.50695859978048,0.754505365544305,0.749132059759059,1.34452820050225,1.20614484806788,0.476293691283074,2.20180219295225,1.15745532278223,0.824171801606613,1.03039244094078,0.685738504770831,1.24233064311536,0.476872379894642,1.74415699958794,0.846984423737976,0.592302255241736,0.548783918618318,0.789209134313529,1.08643291076689,1.68342681497322,0.830445126869219,0.394017929502254,1.22769312950907,1.08455788830176,0.385813221962283,0.249810577937946,0.935726433781634,1.28922632428979,0.191288332068843,0,0.231867835620421 | |phase1_expression=0.320297694209588,16.40184415905,14.1049764210756,9.37639055051173,12.0214975187123,10.4085148585372,10.7461814673942,0,0,0,0,0,0,0.262261207256992,0.333109761815663,0,0,0,0,0,2.38121212422995,0,0,13.9193407830264,14.4527847072317,17.2269589234506,11.630573896295,12.7128027284675,16.3420140732482,12.3494763582366,15.299405235216,0,0,0,4.33277429626912,6.15068187826422,7.35009682544529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167782606057736,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285650984403804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.075726193333184,0,3.47837386442013,0.860423876981386,0,1.61910957491345,0,0,2.38755514223978,0,0,0,0.422530259330042,0,0,0,3.68034769719064,5.57391704045217,7.07734223020697,2.74041311325744,0.258937883647172,0,0,0,0,0,0.23517741427141,0,16.3148678704687,0,0,0,0,0,14.9113408974498,0,0,7.66371165625774,0,0,0,0,0,0,0,0,0,0,0.407357455401265,0.622034853050465,6.31806896084187,10.7325346502102,0,0,0,0,0.0680364991513279,0,0.281105173679186,5.95017752699736,0,0,0,0.219195732427575,0.278047249225598,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,0,0,10.9038198384653,9.25576983322405,0.213288250535234,0.696710015581316,2.44848176511977,6.85723983719365,9.33987784148455,15.5985013412299,9.49058123089023,13.8347121968169,11.5614196048124,7.56034593756373,10.3330966173134,6.29173586057955,9.07779809473716,9.55878111620963,0,0.571242563048644,1.1270773567308,1.4255592949172,2.13347735884388,3.22624771495465,4.17361145020098,6.34723636312289,5.33795674660674,7.89741849099523,0.296452627087149,0,0.393117990226406,0.449724224769707,0,0.72353147925725,1.01850340712568,0.863088412352432,0.486405680325106,1.92192989231657,1.43768206527355,0,0.624075346229121,0.757736633841335,1.79397413521912,0.964887042726734,3.32555742299888,0.189491411770485,0,0.678980343100753,0.704070744865506,1.84256883185997,2.38043640886014,2.14647012643579,0.945810864637146,1.55025282754142,1.91345722388985,2.78567635016755,1.89953480052485,1.3018415272336,0,0,12.2941068254759,6.07060841870411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.890328018336276,0.325773918707152,2.14461159864296,5.30980553359851,2.91336763385978,3.62788268357701,4.52652191414155,5.90603785761546,7.68587869859819,6.20227903603731,4.36240475373007,3.92147116223193,4.74055136903724,7.37930260024991,7.21948802737308,2.04263763452273,0.540183282093931,0.646793418913773,0.857348140126369,0.532020700926821,0.178368817602071,0.493647061806363,0,1.64270195644597,2.75381692122966,7.27743713581374,0.32977250588296,0.161464426695906,0.180938774784468,0.238744688006273,0,6.41257840585672,0,0,0.206386867963223,0,0,0,0,0.169978429993855,0,0.276399947608848,6.68269432610579,0.316335993581135,0.609958401380546,2.48412283890143,2.71814784818809,3.27543845619266,3.50647300600534,3.2234847732881,5.23511883968059,10.3691978633434,6.83473244395618,0,0,0,0,0.258319646955462,0.168956125490778,0.117357238645754,0.39061315453185,0,0.483168241652012,0,0,0,0.102710957164827,0,0.179026695667481,0.198681354781265,0.240390899039938,0,0,0.228620419965,0,0,0.192423683280659,0.116876902181569,0.226730383615211,0.887943813496259,0.807424709485281,2.3503846290971,4.056981474676,4.31669693537719,3.84618410961257,1.07184189539533,5.517293144389,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.628839487883947,0.919217542250071,1.11123363900808,2.26638562962784,1.60459604795908,1.01078884705519,0.50695859978048,0.754505365544305,0.749132059759059,1.34452820050225,1.20614484806788,0.476293691283074,2.20180219295225,1.15745532278223,0.824171801606613,1.03039244094078,0.685738504770831,1.24233064311536,0.476872379894642,1.74415699958794,0.846984423737976,0.592302255241736,0.548783918618318,0.789209134313529,1.08643291076689,1.68342681497322,0.830445126869219,0.394017929502254,1.22769312950907,1.08455788830176,0.385813221962283,0.249810577937946,0.935726433781634,1.28922632428979,0.191288332068843,0,0.231867835620421 | ||
|short_description=p1@Sigirr | |||
}} | }} |
Latest revision as of 03:30, 26 September 2015
Short description: | p1@Sigirr |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sigirr_5end |
Coexpression cluster: | MCL_coexpression_mm9:297 |
Association with transcript: | 0bp_to_ENSMUST00000097958, NM_023059, uc009kjk.1, uc009kjl.1, uc009kjm.1_5end |
EntrezGene: | Sigirr |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 9.25e-09 | 9 |
epithelial cell of alimentary canal | 9.25e-09 | 9 |
epithelial cell | 1.43e-07 | 25 |
endo-epithelial cell | 1.45e-07 | 15 |
brush border epithelial cell | 5.87e-07 | 6 |
gut absorptive cell | 5.87e-07 | 6 |
enterocyte | 5.87e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 3.47e-23 | 31 |
gastrointestinal system | 1.43e-20 | 47 |
mucosa | 1.45e-14 | 15 |
endoderm-derived structure | 5.23e-13 | 118 |
endoderm | 5.23e-13 | 118 |
presumptive endoderm | 5.23e-13 | 118 |
intestinal mucosa | 1.33e-12 | 13 |
wall of intestine | 1.33e-12 | 13 |
gastrointestinal system mucosa | 1.33e-12 | 13 |
digestive system | 2.71e-12 | 116 |
digestive tract | 2.71e-12 | 116 |
primitive gut | 2.71e-12 | 116 |
subdivision of digestive tract | 4.75e-11 | 114 |
organ component layer | 2.52e-10 | 24 |
epithelium of mucosa | 9.25e-09 | 9 |
gastrointestinal system epithelium | 9.25e-09 | 9 |
intestinal epithelium | 9.25e-09 | 9 |
pancreas | 1.78e-08 | 12 |
adult organism | 7.65e-07 | 51 |