FFCP PHASE1:Mm9::chr9:107507626..107507662,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20347 | |EntrezGene=20347 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2433 | |MCL_coexpression_id=2433 | ||
|TSSclassifier=NA | |||
|UniProt=Q62177,Q0VGP2 | |UniProt=Q62177,Q0VGP2 | ||
|association_with_transcript=70bp_to_ENSMUST00000102529,ENSMUST00000169715,NM_009153,uc009rmf.1_5end | |association_with_transcript=70bp_to_ENSMUST00000102529,ENSMUST00000169715,NM_009153,uc009rmf.1_5end | ||
|cluster_id=chr9:107507626..107507662,- | |||
|description=CAGE_peak_2_at_Sema3b_5end | |description=CAGE_peak_2_at_Sema3b_5end | ||
|id=chr9:107507626..107507662,- | |id=chr9:107507626..107507662,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.61e-09,9;CL:0002251,3.61e-09,9;CL:0002076,1.03e-07,15;CL:0000075,2.66e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.52e-13!43;UBERON:0005409!2.81e-12!59;UBERON:0000344!1.65e-10!15;UBERON:0001242!1.77e-09!13;UBERON:0000060!1.77e-09!13;UBERON:0001262!1.77e-09!13;UBERON:0004786!1.77e-09!13;UBERON:0000485!7.77e-07!11 | |ontology_enrichment_uberon=UBERON:0000160!3.52e-13!43;UBERON:0005409!2.81e-12!59;UBERON:0000344!1.65e-10!15;UBERON:0001242!1.77e-09!13;UBERON:0000060!1.77e-09!13;UBERON:0001262!1.77e-09!13;UBERON:0004786!1.77e-09!13;UBERON:0000485!7.77e-07!11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.13e-25,31;UBERON:0005409,2.11e-23,47;UBERON:0000344,7.31e-15,15;UBERON:0004119,1.31e-13,118;UBERON:0000925,1.31e-13,118;UBERON:0006595,1.31e-13,118;UBERON:0001242,2.50e-13,13;UBERON:0001262,2.50e-13,13;UBERON:0004786,2.50e-13,13;UBERON:0001007,1.58e-12,116;UBERON:0001555,1.58e-12,116;UBERON:0007026,1.58e-12,116;UBERON:0004921,1.99e-11,114;UBERON:0004923,6.83e-11,24;UBERON:0003350,3.61e-09,9;UBERON:0004808,3.61e-09,9;UBERON:0001277,3.61e-09,9;UBERON:0000485,1.08e-08,11;UBERON:0005178,2.34e-07,17;UBERON:0005181,2.34e-07,17;UBERON:0002224,2.34e-07,17;UBERON:0000915,2.34e-07,17;UBERON:0008947,2.34e-07,17;UBERON:0003258,2.34e-07,17 | |||
|phase1_expression=0.480446541314382,9.42233600626275,9.09998478779072,7.56160528267075,8.01433167914156,3.3575854382378,4.67225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,4.63978026100879,5.73523202667925,3.44539178469012,4.30761996159075,4.74036711908956,15.2018735565099,9.57714493087737,9.3126814475228,0,0,0,5.48818077527422,6.81562045969819,9.18762103180661,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.878744730937887,1.74986909166855,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0.449949858640699,0,0,0.898800331555214,0.384218305321555,0.103689612308478,0,0,1.14260393761521,1.76694832761291,0,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.182975287204819,0,0,2.8138130501584,0.763991238884051,0.883885756421003,0.711858403995515,0.372798891650601,15.22096485997,12.8471652181535,0,0,0,0,0,0,1.54488862144927,0,0,0,4.64783285263046,0,0,0,3.24736561516821,3.54703811665138,1.51657333504435,1.48439043634778,0,0.148442139064825,0.173485326766136,0,0.922461989024234,0.904335843315735,0.470354828542819,0.502666365318702,2.71914464507811,0.289198713839823,0,0.485300549842228,1.10420759230197,0,5.59175283654366,0.585561594023094,0.41889341362691,7.91916871146633,0,0,0,0,0.457500602818626,0,0.173824320192276,0,0,0.162241263067758,0.203678727700633,0.870848794270651,2.0217820674694,0.631325567659422,0,0.229902104433473,0.360124259610698,0.150704817835715,0.748401490664606,0.384341160854549,1.03071897015702,1.03481348295606,0,0,0,0,0,0.348252166522167,0.411564272815887,0.59710280045548,0,0,0,0,0.469052119962192,0.180062061461015,0.946978942340841,0.393528463494808,0.308534225774757,0.697601834251224,0.268273401399619,0.700592054203017,1.31647879930784,0.820837320395476,0.729619285912702,1.16959989940266,0.878200461164203,0.671032093801859,1.05144974282064,0.411618449517138,15.8601015832223,6.61126416658861,0,0,2.44848176511977,4.63872106633688,6.44896327150124,5.1360919050391,12.3377556001573,7.24675400785648,7.79139147280835,9.15199771389294,7.99352757188393,13.4822911298133,8.42938394511308,9.35963984295526,0.189667900953082,0.571242563048644,0,0.814605311381257,1.55161989734101,0.771494018793504,1.58091342810643,3.24742325555125,2.66897837330337,3.33172342588861,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,6.09685527549795,0,0.162964976442026,0.169745085775188,1.87752198630802,1.67506257441816,3.33261097240419,3.70753930929818,3.4679731703362,1.99318220683897,6.53764551495697,4.09658286789345,4.14443956478149,4.33947175744535,0,0,0.491764273019036,0.275936746304732,0.963303539926752,0.586058432961016,0,1.00988370881749,0.94652465824877,0,0.215423397732799,2.15071918157297,3.7875774594007,2.26461224631066,0.809621403349789,2.63030272120181,2.37172666767914,0,1.27746076687442,0.534196811001766,0,0.659880491890142,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0.922305443831782,2.06742634534577,1.45413491791002,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0,0,3.75474732901937,4.66030555900404,0.220528398054962,0.98931751764888,0.322928853391811,0.72375509913787,0.358117032009409,0.328281799490123,10.7847909553045,0.927126510052548,0,0,0,0,0,0.228778173206523,0,0,0,8.59203556213602,0,0.406638934253697,1.51207477150522,2.50905955217362,1.09181281873089,4.18079473792944,3.96736587481612,7.59092231753686,16.0722566881823,0.621339313086926,0,0.149516546043979,0.330916980914195,0.972255941720238,0.645799117388655,1.520605129417,0.469428954583016,0.5208175393758,0.209718688851422,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,1.58711268530648,0,0,0,4.056981474676,6.19352168988901,0.183151624267265,1.2862102744744,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0.183843508450014,0.666740183404846,0.824140228955577,0.962757628775446,0.505394423527595,0,0.754505365544305,1.40462261204824,0.704276676453562,0.918967503289812,1.42888107384922,1.15884325944855,0.964546102318525,0.824171801606613,0.588795680537589,0,0.532427418478012,0.953744759789284,0.872078499793971,0.564656282491984,0.676916863133412,2.0122077016005,0.526139422875686,0.679020569229309,0,1.30498519936592,0.985044823755635,0.409231043169689,0.464810523557898,1.15743966588685,1.49886346762768,1.16965804222704,1.71896843238639,0.382576664137687,1.54413993383661,1.85494268496337 | |phase1_expression=0.480446541314382,9.42233600626275,9.09998478779072,7.56160528267075,8.01433167914156,3.3575854382378,4.67225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,4.63978026100879,5.73523202667925,3.44539178469012,4.30761996159075,4.74036711908956,15.2018735565099,9.57714493087737,9.3126814475228,0,0,0,5.48818077527422,6.81562045969819,9.18762103180661,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.878744730937887,1.74986909166855,0.419959264876088,1.43752564364972,0,0,0,0,0,0,0.404632921719196,0,0,0,0,0.449949858640699,0,0,0.898800331555214,0.384218305321555,0.103689612308478,0,0,1.14260393761521,1.76694832761291,0,0,0,0,0.127687338085188,0.153606533256243,0.131886287730194,0.182975287204819,0,0,2.8138130501584,0.763991238884051,0.883885756421003,0.711858403995515,0.372798891650601,15.22096485997,12.8471652181535,0,0,0,0,0,0,1.54488862144927,0,0,0,4.64783285263046,0,0,0,3.24736561516821,3.54703811665138,1.51657333504435,1.48439043634778,0,0.148442139064825,0.173485326766136,0,0.922461989024234,0.904335843315735,0.470354828542819,0.502666365318702,2.71914464507811,0.289198713839823,0,0.485300549842228,1.10420759230197,0,5.59175283654366,0.585561594023094,0.41889341362691,7.91916871146633,0,0,0,0,0.457500602818626,0,0.173824320192276,0,0,0.162241263067758,0.203678727700633,0.870848794270651,2.0217820674694,0.631325567659422,0,0.229902104433473,0.360124259610698,0.150704817835715,0.748401490664606,0.384341160854549,1.03071897015702,1.03481348295606,0,0,0,0,0,0.348252166522167,0.411564272815887,0.59710280045548,0,0,0,0,0.469052119962192,0.180062061461015,0.946978942340841,0.393528463494808,0.308534225774757,0.697601834251224,0.268273401399619,0.700592054203017,1.31647879930784,0.820837320395476,0.729619285912702,1.16959989940266,0.878200461164203,0.671032093801859,1.05144974282064,0.411618449517138,15.8601015832223,6.61126416658861,0,0,2.44848176511977,4.63872106633688,6.44896327150124,5.1360919050391,12.3377556001573,7.24675400785648,7.79139147280835,9.15199771389294,7.99352757188393,13.4822911298133,8.42938394511308,9.35963984295526,0.189667900953082,0.571242563048644,0,0.814605311381257,1.55161989734101,0.771494018793504,1.58091342810643,3.24742325555125,2.66897837330337,3.33172342588861,0,0,0,0,0,0,0,0.287696137450811,0,0,0,0.372140947668503,0,0,0,0,6.09685527549795,0,0.162964976442026,0.169745085775188,1.87752198630802,1.67506257441816,3.33261097240419,3.70753930929818,3.4679731703362,1.99318220683897,6.53764551495697,4.09658286789345,4.14443956478149,4.33947175744535,0,0,0.491764273019036,0.275936746304732,0.963303539926752,0.586058432961016,0,1.00988370881749,0.94652465824877,0,0.215423397732799,2.15071918157297,3.7875774594007,2.26461224631066,0.809621403349789,2.63030272120181,2.37172666767914,0,1.27746076687442,0.534196811001766,0,0.659880491890142,0,0.485561272309963,0.302323556964751,0.188605079755898,0.295301892880773,0.922305443831782,2.06742634534577,1.45413491791002,0,0.316036757935816,1.05418608574999,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0,0,3.75474732901937,4.66030555900404,0.220528398054962,0.98931751764888,0.322928853391811,0.72375509913787,0.358117032009409,0.328281799490123,10.7847909553045,0.927126510052548,0,0,0,0,0,0.228778173206523,0,0,0,8.59203556213602,0,0.406638934253697,1.51207477150522,2.50905955217362,1.09181281873089,4.18079473792944,3.96736587481612,7.59092231753686,16.0722566881823,0.621339313086926,0,0.149516546043979,0.330916980914195,0.972255941720238,0.645799117388655,1.520605129417,0.469428954583016,0.5208175393758,0.209718688851422,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0,0,0,0.100966449948148,0,0,0,0,0,1.58711268530648,0,0,0,4.056981474676,6.19352168988901,0.183151624267265,1.2862102744744,0,0,0.460325236507177,0,0,0,0,0,0,0,0,0,0.399024873401031,0.170733605754134,0.243106717068294,0,0.183843508450014,0.666740183404846,0.824140228955577,0.962757628775446,0.505394423527595,0,0.754505365544305,1.40462261204824,0.704276676453562,0.918967503289812,1.42888107384922,1.15884325944855,0.964546102318525,0.824171801606613,0.588795680537589,0,0.532427418478012,0.953744759789284,0.872078499793971,0.564656282491984,0.676916863133412,2.0122077016005,0.526139422875686,0.679020569229309,0,1.30498519936592,0.985044823755635,0.409231043169689,0.464810523557898,1.15743966588685,1.49886346762768,1.16965804222704,1.71896843238639,0.382576664137687,1.54413993383661,1.85494268496337 | ||
|short_description=p2@Sema3b | |short_description=p2@Sema3b | ||
}} | }} |
Latest revision as of 03:33, 26 September 2015
Short description: | p2@Sema3b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sema3b_5end |
Coexpression cluster: | MCL_coexpression_mm9:2433 |
Association with transcript: | 70bp_to_ENSMUST00000102529, ENSMUST00000169715, NM_009153, uc009rmf.1_5end |
EntrezGene: | Sema3b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.61e-09 | 9 |
epithelial cell of alimentary canal | 3.61e-09 | 9 |
endo-epithelial cell | 1.03e-07 | 15 |
columnar/cuboidal epithelial cell | 2.66e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.13e-25 | 31 |
gastrointestinal system | 2.11e-23 | 47 |
mucosa | 7.31e-15 | 15 |
endoderm-derived structure | 1.31e-13 | 118 |
endoderm | 1.31e-13 | 118 |
presumptive endoderm | 1.31e-13 | 118 |
intestinal mucosa | 2.50e-13 | 13 |
wall of intestine | 2.50e-13 | 13 |
gastrointestinal system mucosa | 2.50e-13 | 13 |
digestive system | 1.58e-12 | 116 |
digestive tract | 1.58e-12 | 116 |
primitive gut | 1.58e-12 | 116 |
subdivision of digestive tract | 1.99e-11 | 114 |
organ component layer | 6.83e-11 | 24 |
epithelium of mucosa | 3.61e-09 | 9 |
gastrointestinal system epithelium | 3.61e-09 | 9 |
intestinal epithelium | 3.61e-09 | 9 |
simple columnar epithelium | 1.08e-08 | 11 |
thoracic cavity element | 2.34e-07 | 17 |
thoracic segment organ | 2.34e-07 | 17 |
thoracic cavity | 2.34e-07 | 17 |
thoracic segment of trunk | 2.34e-07 | 17 |
respiratory primordium | 2.34e-07 | 17 |
endoderm of foregut | 2.34e-07 | 17 |