FFCP PHASE1:Mm9::chr11:99092233..99092273,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=57376 | |EntrezGene=57376 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2755 | |MCL_coexpression_id=2755 | ||
|TSSclassifier=NA | |||
|UniProt=O54941,C0IMW9,A2A4L8,C0IMX1 | |UniProt=O54941,C0IMW9,A2A4L8,C0IMX1 | ||
|association_with_transcript=57bp_to_ENSMUST00000103133,ENSMUST00000166012,NM_020618,uc007lii.1,uc007lij.1,uc011yej.1,uc011yek.1,uc011yel.1,uc011yem.1,uc011yen.1_5end | |association_with_transcript=57bp_to_ENSMUST00000103133,ENSMUST00000166012,NM_020618,uc007lii.1,uc007lij.1,uc011yej.1,uc011yek.1,uc011yel.1,uc011yem.1,uc011yen.1_5end | ||
|cluster_id=chr11:99092233..99092273,- | |||
|description=CAGE_peak_2_at_Smarce1_5end | |description=CAGE_peak_2_at_Smarce1_5end | ||
|id=chr11:99092233..99092273,- | |id=chr11:99092233..99092273,- | ||
|ontology_enrichment_celltype=CL:0000393!3.57e-09!39;CL:0000211!3.57e-09!39;CL:0000540!1.13e-08!33;CL:0000047!1.13e-08!33;CL:0000031!1.13e-08!33;CL:0000404!1.13e-08!33;CL:0002319!5.73e-08!43;CL:0000221!5.97e-08!44;CL:0000133!5.97e-08!44;CL:0000055!7.35e-08!50 | |ontology_enrichment_celltype=CL:0000393!3.57e-09!39;CL:0000211!3.57e-09!39;CL:0000540!1.13e-08!33;CL:0000047!1.13e-08!33;CL:0000031!1.13e-08!33;CL:0000404!1.13e-08!33;CL:0002319!5.73e-08!43;CL:0000221!5.97e-08!44;CL:0000133!5.97e-08!44;CL:0000055!7.35e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000393,3.30e-09,39;CL:0000211,3.30e-09,39;CL:0000540,1.05e-08,33;CL:0000047,1.05e-08,33;CL:0000031,1.05e-08,33;CL:0000404,1.05e-08,33;CL:0002319,5.36e-08,43;CL:0000221,5.59e-08,44;CL:0000133,5.59e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!8.62e-08!73;UBERON:0005743!8.62e-08!73;UBERON:0000073!2.49e-07!75;UBERON:0001016!2.49e-07!75 | |ontology_enrichment_uberon=UBERON:0001017!8.62e-08!73;UBERON:0005743!8.62e-08!73;UBERON:0000073!2.49e-07!75;UBERON:0001016!2.49e-07!75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.45e-08,73;UBERON:0001016,2.73e-07,75;UBERON:0004121,9.00e-07,95;UBERON:0000924,9.00e-07,95;UBERON:0006601,9.00e-07,95 | |||
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| |phase1_expression=10.4096750618116,1.39590163055744,0.909998478779072,0.30246421130683,0,1.84667199103079,3.27057696833736,1.80772652818207,19.851209823385,25.0449043164533,7.36237263369671,6.62108919661292,1.02720437958723,1.31130603628496,1.33243904726265,2.02475267389826,1.39912375625629,2.20823515750766,1.91960207048034,3.81950686618227,1.78590909317247,5.46100231604869,3.6567970479451,1.43993180514066,1.60586496747019,0,0.86152399231815,1.07735616342945,0.570070258369122,0,1.77384408524244,2.54012269383853,0.61506478758457,15.8481681015439,1.1554064790051,1.82858109894342,3.06254034393554,0,0.7813353445238,0.523523743973798,0.588231488031014,0.683045484958446,0,9.31636453019272,7.19776211658553,6.24058957349717,11.7358701652206,2.61630187656536,3.29529274101708,3.4997381833371,8.9591309840232,5.75010257459886,4.02678254538567,3.62681071005672,3.02484419228218,5.40244815675489,3.15186783932632,3.6097046459421,16.9945827122062,22.7466121086974,18.3811107016792,9.4876468979357,8.00365316500025,1.3498495759221,0.988866362566974,0,6.2916023208865,2.30530983192933,8.50254820929517,10.8004750665353,9.25429829946081,6.28432165688368,4.19650227808066,12.1265891222804,13.0349840584801,11.0306254393203,1.10115880999389,3.06449611404451,3.37934373163736,21.761237475482,23.8782749802289,17.7110545989298,2.23346399201105,2.25105044012672,3.51435969886663,7.36571463684169,7.26095572075425,12.6751623161204,1.66597625333005,2.64500460373749,1.73918693221007,0,0,0.539703191637817,0,0,0.842666520790511,3.57903677413921,3.89679006904303,3.18005617059306,4.08445917352373,6.41632387071589,2.54805239706646,0,2.81438353314578,4.81383744402687,3.53867111510348,0.68510327831436,2.84831672011889,2.22663208597237,8.67426633830679,4.87144765299426,4.38169444786511,2.26083960828934,3.76283862834255,1.25666591329675,1.73036477414062,0.578397427679647,0.884610551949874,3.72063754879041,1.54589062922275,1.93950101254089,1.86391761218122,2.92780797011547,1.25668024088073,0.510914110417183,8.38705871541442,4.19931911695385,4.57452817463033,3.89455662452539,4.11750542536764,7.79056983099759,2.43354048269187,3.58001640262463,4.36354893575076,3.73154905055843,7.02691610567182,3.4833951770826,5.81262344397452,0.841767423545896,23.4216797332867,13.5642241615749,13.6847218652065,9.34369870581433,7.48401490664606,7.04625461566674,6.09061209638237,3.10444044886819,46.3471184805611,30.0678667466833,22.1698416446576,13.5901354105096,10.5657954705727,7.3132954969655,5.76189981942242,10.1507476077432,5.61770549850588,5.1469581422943,1.70498099637356,10.7705401718461,7.73935997937617,7.74266864282364,7.10234206755631,4.13204886669548,3.70241070929708,4.41814495025775,2.68273401399619,1.40118410840603,2.46839774870221,0.820837320395476,1.05389452409612,0.584799949701329,1.09775057645525,0.268412837520744,4.41608891984667,8.33527360272204,0.660837565967596,0.793351699990633,15.7833305396073,9.0572302025571,7.86091514064769,6.05050573870028,3.11329261382818,1.52180500890047,0.474529061544512,1.31759163779209,1.50801125280162,1.39269530428806,1.55971269695296,1.79763881730844,0.864552199498777,0,20.6738012038859,12.7958334122896,19.1603150644237,6.31319116320474,7.17624202520215,7.22398944870281,3.16182685621286,1.47610147979602,0.627994911365499,0.863780147452604,0.592905254174298,4.33797274861845,3.93117990226406,4.27238013531222,3.04290182082754,2.65294875727659,1.2731292589071,0.863088412352432,1.29708181420028,1.37280706594041,0,0.744281895337007,0.624075346229121,0.252578877947112,0.179397413521912,0,0.923765950833023,14.7803301180978,13.5260930446881,5.94107800213158,6.80601720036656,3.85264392116176,2.61848004974615,2.53673742215138,1.57635144106191,4.20782910332672,1.75400245523236,0.327726629431476,0.863424909329478,0.433947175744535,0,1.63171705145613,1.47529281905711,1.93155722413313,1.76605648986571,3.04750385139728,10.8197063948606,0.252470927204373,8.51872192423893,7.02789739733949,10.1248996934415,9.31978312014953,6.46116154838943,7.35998980050964,6.8817819284732,7.01414058987149,7.90575555893047,1.92792789853084,2.6968616189571,6.94455854302295,10.2618784392753,4.45419332025846,0,10.6823479908192,4.23252979750651,0.943025398779491,3.2483208216885,2.76691633149535,2.58428293168221,2.18120237686503,2.13898427030833,1.26414703174326,0,1.03135543248187,5.10659408630682,17.6459872150684,15.9111181052788,14.3605813471167,9.75371285032505,10.3453914209201,5.59466670047211,5.17590413494819,2.58138878870081,5.2958017715955,0,1.48397627647332,2.74489525383039,4.58378229453985,2.74556391207214,2.9545361954111,0.582961673259701,3.8939313422207,1.02522528478712,7.84270098260245,3.70389054739423,3.20226376907975,2.05041341581538,2.28778173206523,9.17883521966819,6.85762116385924,9.25939824489639,0.954670618015114,23.0925275314229,8.13277868507395,3.45617090629764,3.55450103224597,3.27543845619266,1.88810084938749,1.48776220305605,0.523511883968059,0.648074866458964,0.621339313086926,2.25477175473676,10.9147078612105,9.10021697514037,12.250424865675,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| ||
|short_description=p2@Smarce1 | |short_description=p2@Smarce1 | ||
}} | }} |
Latest revision as of 03:54, 26 September 2015
Short description: | p2@Smarce1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Smarce1_5end |
Coexpression cluster: | MCL_coexpression_mm9:2755 |
Association with transcript: | 57bp_to_ENSMUST00000103133, ENSMUST00000166012, NM_020618, uc007lii.1, uc007lij.1, uc011yej.1, uc011yek.1, uc011yel.1, uc011yem.1, uc011yen.1_5end |
EntrezGene: | Smarce1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
electrically responsive cell | 3.30e-09 | 39 |
electrically active cell | 3.30e-09 | 39 |
neuron | 1.05e-08 | 33 |
neuronal stem cell | 1.05e-08 | 33 |
neuroblast | 1.05e-08 | 33 |
electrically signaling cell | 1.05e-08 | 33 |
neural cell | 5.36e-08 | 43 |
ectodermal cell | 5.59e-08 | 44 |
neurectodermal cell | 5.59e-08 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 9.45e-08 | 73 |
nervous system | 2.73e-07 | 75 |
ectoderm-derived structure | 9.00e-07 | 95 |
ectoderm | 9.00e-07 | 95 |
presumptive ectoderm | 9.00e-07 | 95 |