FFCP PHASE1:Mm9::chr9:107952190..107952225,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=331026 | |EntrezGene=331026 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-43bp_to_ENSMUST00000145330_5end | |||
|cluster_id=chr9:107952190..107952225,+ | |||
|description=CAGE_peak_2_at_Gmppb_5end | |||
|id=chr9:107952190..107952225,+ | |||
|ontology_enrichment_celltype=CL:0002563!3.73e-10!9;CL:0002251!3.73e-10!9;CL:0000239!9.75e-10!6;CL:0000677!9.75e-10!6;CL:0000212!9.75e-10!6;CL:0000584!9.75e-10!6;CL:0000075!3.59e-08!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,2.79e-16,6;CL:0000677,2.79e-16,6;CL:0000584,2.79e-16,6;CL:0002563,6.83e-14,9;CL:0002251,6.83e-14,9;CL:0000075,7.47e-14,7;CL:0000682,1.38e-09,3;CL:0000066,3.01e-09,25;CL:0002076,6.38e-08,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.32e-23!43;UBERON:0005409!5.14e-20!59;UBERON:0000344!1.73e-18!15;UBERON:0001242!1.45e-15!13;UBERON:0000060!1.45e-15!13;UBERON:0001262!1.45e-15!13;UBERON:0004786!1.45e-15!13;UBERON:0004923!6.85e-13!24;UBERON:0003350!3.73e-10!9;UBERON:0004808!3.73e-10!9;UBERON:0001277!3.73e-10!9;UBERON:0000485!5.83e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,7.03e-52,31;UBERON:0005409,2.65e-32,47;UBERON:0000344,1.46e-28,15;UBERON:0001242,2.19e-23,13;UBERON:0001262,2.19e-23,13;UBERON:0004786,2.19e-23,13;UBERON:0004923,9.55e-17,24;UBERON:0003350,6.83e-14,9;UBERON:0004808,6.83e-14,9;UBERON:0001277,6.83e-14,9;UBERON:0001007,4.79e-12,116;UBERON:0001555,4.79e-12,116;UBERON:0007026,4.79e-12,116;UBERON:0004119,9.71e-12,118;UBERON:0000925,9.71e-12,118;UBERON:0006595,9.71e-12,118;UBERON:0000485,3.54e-11,11;UBERON:0002108,3.62e-11,4;UBERON:0004921,5.62e-10,114;UBERON:0000331,4.51e-09,3;UBERON:0002116,4.51e-09,3;UBERON:0001204,4.51e-09,3;UBERON:0001168,4.51e-09,3;UBERON:0001962,7.62e-07,2;UBERON:0001961,7.62e-07,2;UBERON:0001744,7.62e-07,2 | |||
|phase1_expression=0,21.287499866001,21.8399634906977,6.35174843744343,7.51343594919521,7.38668796412315,5.60670337429262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6794468639187,15.3704218315004,25.2662064210609,15.0766698655676,12.7128027284675,8.36103045608045,8.31699428207772,9.97787297948871,0,0,0,0.577703239502549,1.16364251750945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,1.86391761218122,0,0,7.15279754584056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.26921322564356,7.40461586657924,0,0,0.257734922644187,3.63030344322017,8.45036566610507,8.94060442729028,4.2707615539006,4.94096864172033,5.52937459360593,5.57078121715222,3.70431765526328,6.29173586057955,4.75503709724327,2.58883655230677,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80899805217755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.655087691238533,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0.824140228955577,0,0.758091635291392,0.25347929989024,0,0.468207537349412,0.320125762024346,0.516919220600519,0.476293691283074,0.579421629724277,0.77163688185482,0.412085900803307,0.147198920134397,0,0.177475806159338,0.715308569841963,0.581385666529314,0.188218760830661,0.169229215783353,0.548783918618318,0.526139422875686,0,2.80571135828869,0.711810108745045,0.0985044823755635,1.22769312950907,0.464810523557898,0.192906610981141,0,0.467863216890817,0,0,0,0 | |phase1_expression=0,21.287499866001,21.8399634906977,6.35174843744343,7.51343594919521,7.38668796412315,5.60670337429262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.6794468639187,15.3704218315004,25.2662064210609,15.0766698655676,12.7128027284675,8.36103045608045,8.31699428207772,9.97787297948871,0,0,0,0.577703239502549,1.16364251750945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.02765491747154,0,0,0,0,0,0,0,0,0.741584903203122,0,0,0,0,0,1.86391761218122,0,0,7.15279754584056,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.26921322564356,7.40461586657924,0,0,0.257734922644187,3.63030344322017,8.45036566610507,8.94060442729028,4.2707615539006,4.94096864172033,5.52937459360593,5.57078121715222,3.70431765526328,6.29173586057955,4.75503709724327,2.58883655230677,0,0,0,0,0,0,0,0,0,0,0,0,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.80899805217755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,4.37221254944776,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.418176592028937,0.655087691238533,0,0.0826534557253359,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.367687016900028,0,0.824140228955577,0,0.758091635291392,0.25347929989024,0,0.468207537349412,0.320125762024346,0.516919220600519,0.476293691283074,0.579421629724277,0.77163688185482,0.412085900803307,0.147198920134397,0,0.177475806159338,0.715308569841963,0.581385666529314,0.188218760830661,0.169229215783353,0.548783918618318,0.526139422875686,0,2.80571135828869,0.711810108745045,0.0985044823755635,1.22769312950907,0.464810523557898,0.192906610981141,0,0.467863216890817,0,0,0,0 | ||
|short_description=p2@Gmppb | |||
}} | }} |
Latest revision as of 03:59, 26 September 2015
Short description: | p2@Gmppb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gmppb_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | -43bp_to_ENSMUST00000145330_5end |
EntrezGene: | Gmppb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 2.79e-16 | 6 |
gut absorptive cell | 2.79e-16 | 6 |
enterocyte | 2.79e-16 | 6 |
intestinal epithelial cell | 6.83e-14 | 9 |
epithelial cell of alimentary canal | 6.83e-14 | 9 |
columnar/cuboidal epithelial cell | 7.47e-14 | 7 |
M cell of gut | 1.38e-09 | 3 |
epithelial cell | 3.01e-09 | 25 |
endo-epithelial cell | 6.38e-08 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 7.03e-52 | 31 |
gastrointestinal system | 2.65e-32 | 47 |
mucosa | 1.46e-28 | 15 |
intestinal mucosa | 2.19e-23 | 13 |
wall of intestine | 2.19e-23 | 13 |
gastrointestinal system mucosa | 2.19e-23 | 13 |
organ component layer | 9.55e-17 | 24 |
epithelium of mucosa | 6.83e-14 | 9 |
gastrointestinal system epithelium | 6.83e-14 | 9 |
intestinal epithelium | 6.83e-14 | 9 |
digestive system | 4.79e-12 | 116 |
digestive tract | 4.79e-12 | 116 |
primitive gut | 4.79e-12 | 116 |
endoderm-derived structure | 9.71e-12 | 118 |
endoderm | 9.71e-12 | 118 |
presumptive endoderm | 9.71e-12 | 118 |
simple columnar epithelium | 3.54e-11 | 11 |
small intestine | 3.62e-11 | 4 |
subdivision of digestive tract | 5.62e-10 | 114 |
ileal mucosa | 4.51e-09 | 3 |
ileum | 4.51e-09 | 3 |
mucosa of small intestine | 4.51e-09 | 3 |
wall of small intestine | 4.51e-09 | 3 |
gut-associated lymphoid tissue | 7.62e-07 | 2 |
mucosa-associated lymphoid tissue | 7.62e-07 | 2 |
lymphoid tissue | 7.62e-07 | 2 |