FFCP PHASE1:Mm9::chr10:62706508..62706519,+: Difference between revisions
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{{FFCP|EntrezGene=67345|HGNC=|MCL_coexpression_id=0|UniProt=Q6PAV2|association_with_transcript=-25bp_to_NM_026101,NM_030114,uc007fka.2,uc007fkb.2,uc007fkc.2,uc007fkd.2,uc011xfl.1_5end|description=CAGE_peak_6_at_Herc4_5end|id=chr10:62706508..62706519,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002293,4.17e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.81e-12,14;UBERON:0003135,2.69e-11,15;UBERON:0003101,1.22e-10,16;UBERON:0000079,1.22e-10,16;UBERON:0004176,4.62e-10,17;UBERON:0009196,4.62e-10,17;UBERON:0009117,4.62e-10,17;UBERON:0000991,1.52e-09,18;UBERON:0005564,1.52e-09,18;UBERON:0003133,2.41e-07,24;UBERON:0005156,7.82e-07,26;UBERON:0000990,7.82e-07,26|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0.287536413054709,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0,0,0.284743361598206,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,2.54805239706646,0,0,0,0,0.45673551887624,0,0,0,0,0,0.150722640552623,0,0.125666591329675,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0.449371918214468,0,0.251308704225729,0,0,0,0,0,0.124406970610093,0,0,0,0.229902104433473,0,0,0.0680364991513279,0,0,0,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0,0,0,0,0,0,0,0,0.35163505977661,0,0,0,0.390438744296638,0,0.238968797952552,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0.18542530201051,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0,0,0,0,6.76431526421028,0,0,0,0.129159823477731,0,0,0.13020438484395,0.314578033277133,1.69108884578204,8.06484017522023,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0.187283014939765,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0,0|short_description=p6@Herc4}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67345 | |||
|HGNC= | |||
|MCL_coexpression_id=0 | |||
|TSSclassifier=NA | |||
|UniProt=Q6PAV2 | |||
|association_with_transcript=-25bp_to_NM_026101,NM_030114,uc007fka.2,uc007fkb.2,uc007fkc.2,uc007fkd.2,uc011xfl.1_5end | |||
|cluster_id=chr10:62706508..62706519,+ | |||
|description=CAGE_peak_6_at_Herc4_5end | |||
|id=chr10:62706508..62706519,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002293,4.17e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,4.81e-12,14;UBERON:0003135,2.69e-11,15;UBERON:0003101,1.22e-10,16;UBERON:0000079,1.22e-10,16;UBERON:0004176,4.62e-10,17;UBERON:0009196,4.62e-10,17;UBERON:0009117,4.62e-10,17;UBERON:0000991,1.52e-09,18;UBERON:0005564,1.52e-09,18;UBERON:0003133,2.41e-07,24;UBERON:0005156,7.82e-07,26;UBERON:0000990,7.82e-07,26 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315462165358238,0,0,2.29616883407888,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.7813353445238,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0.515672092277442,0,0,0,0,0,0,0,0,0,0,0,0,0.210324961351382,0,0,0,0.287536413054709,0,0,0,0,0.131886287730194,0.0914876436024097,0,0,0,0,0,0.284743361598206,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,2.54805239706646,0,0,0,0,0.45673551887624,0,0,0,0,0,0.150722640552623,0,0.125666591329675,0,0,0,0,0,0,0,0.585561594023094,0.209446706813455,0,0,0,0,0.449371918214468,0,0.251308704225729,0,0,0,0,0,0.124406970610093,0,0,0,0.229902104433473,0,0,0.0680364991513279,0,0,0,0.215567992932842,0,0.175951124163949,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157635144106191,0,0.318909537314974,0,0,0,0,0,0,0,0,0.35163505977661,0,0,0,0.390438744296638,0,0.238968797952552,0,0,0,0,0,0,0,0.35613120733451,0,0,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0.18542530201051,0,0.206386867963223,0.185194527369712,0.188368457004691,0,0,0,0.139951452323658,0.138199973804424,0,0,0,0,0,0,0.134864346384821,0,0,0,0,6.76431526421028,0,0,0,0.129159823477731,0,0,0.13020438484395,0.314578033277133,1.69108884578204,8.06484017522023,0,0,0,0,0,0,0,0,0,0.15241361331,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0,0,0,0,0,0,0.187283014939765,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0.0941093804153306,0.169229215783353,0,0,0,0,0,0.197008964751127,0,0.154936841185966,0,0.249810577937946,0,0.214871054048298,0,0,0 | |||
|short_description=p6@Herc4 | |||
}} |
Latest revision as of 04:52, 26 September 2015
Short description: | p6@Herc4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Herc4_5end |
Coexpression cluster: | MCL_coexpression_mm9:0 |
Association with transcript: | -25bp_to_NM_026101, NM_030114, uc007fka.2, uc007fkb.2, uc007fkc.2, uc007fkd.2, uc011xfl.1_5end |
EntrezGene: | Herc4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of thymus | 4.17e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
testis | 4.81e-12 | 14 |
male reproductive organ | 2.69e-11 | 15 |
male organism | 1.22e-10 | 16 |
male reproductive system | 1.22e-10 | 16 |
external genitalia | 4.62e-10 | 17 |
indifferent external genitalia | 4.62e-10 | 17 |
indifferent gonad | 4.62e-10 | 17 |
gonad | 1.52e-09 | 18 |
gonad primordium | 1.52e-09 | 18 |
reproductive organ | 2.41e-07 | 24 |
reproductive structure | 7.82e-07 | 26 |
reproductive system | 7.82e-07 | 26 |