FFCP PHASE1:Mm9::chr5:74021542..74021582,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=231296 | |EntrezGene=231296 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt=D3Z0I0 | |UniProt=D3Z0I0 | ||
|association_with_transcript=0bp_to_ENSMUST00000152215_5end | |association_with_transcript=0bp_to_ENSMUST00000152215_5end | ||
|cluster_id=chr5:74021542..74021582,- | |||
|description=CAGE_peak_1_at_Lrrc66_5end | |description=CAGE_peak_1_at_Lrrc66_5end | ||
|id=chr5:74021542..74021582,- | |id=chr5:74021542..74021582,- | ||
|ontology_enrichment_celltype=CL:0002563!1.71e-08!9;CL:0002251!1.71e-08!9 | |ontology_enrichment_celltype=CL:0002563!1.71e-08!9;CL:0002251!1.71e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.04e-12,9;CL:0002251,3.04e-12,9;CL:0000239,4.90e-09,6;CL:0000677,4.90e-09,6;CL:0000584,4.90e-09,6;CL:0000075,1.40e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!4.95e-16!59;UBERON:0000160!9.60e-15!43;UBERON:0000344!1.13e-13!15;UBERON:0001242!4.61e-12!13;UBERON:0000060!4.61e-12!13;UBERON:0001262!4.61e-12!13;UBERON:0004786!4.61e-12!13;UBERON:0004923!7.21e-10!24;UBERON:0003350!1.71e-08!9;UBERON:0004808!1.71e-08!9;UBERON:0001277!1.71e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.89e-36,31;UBERON:0005409,7.30e-36,47;UBERON:0000344,3.15e-20,15;UBERON:0001242,9.62e-18,13;UBERON:0001262,9.62e-18,13;UBERON:0004786,9.62e-18,13;UBERON:0004923,2.62e-12,24;UBERON:0003350,3.04e-12,9;UBERON:0004808,3.04e-12,9;UBERON:0001277,3.04e-12,9;UBERON:0000485,1.33e-09,11;UBERON:0001007,1.88e-09,116;UBERON:0001555,1.88e-09,116;UBERON:0007026,1.88e-09,116;UBERON:0004119,4.14e-09,118;UBERON:0000925,4.14e-09,118;UBERON:0006595,4.14e-09,118;UBERON:0004921,3.08e-08,114;UBERON:0002108,8.15e-07,4 | |||
|phase1_expression=0,22.3344260889191,14.5599756604652,49.6041306543201,26.5474736871564,9.56911849897772,9.34450562382103,0.645616617207881,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0.42438965179803,0.0850432901510698,0.595745707205312,1.04479915655574,19.0390983124154,19.2703796096423,9.76194338995534,10.3382879078178,10.7735616342945,36.104449696711,23.1867719379136,12.1951780860418,0,0,0,12.4206196493048,6.31691652362271,7.9626048942324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,6.96521666286266,0,0,0,0,0,0,0,0,1.23597483867187,0.289198713839823,0,0,0,0,41.0061874679869,0,0,29.8884754594052,0.359445373517761,1.79970819298022,0.254140454146129,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0.420883711772948,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0,0,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0,0,0,0.284163499395593,0,0,0,0,0,0.154267112887378,0,0,0.233530684734339,0,0.164167464079095,0,0,0,0,0,0,92.5172592354634,55.0057178660172,0,0,2.44848176511977,10.8909103296605,14.2321948060717,19.403013863481,21.8283368310475,22.0696599330175,22.6201687920243,21.8852119245266,22.2259059315797,19.7740269903929,36.0950543290739,35.8454291857861,0,0,0,0,0,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0,0,0.120625849856312,0.238744688006273,0,22.1525435838687,0,0,0,0.185194527369712,0,0,0,0.169978429993855,0.839708713941948,0.138199973804424,5.72802370809068,0,0,1.51207477150522,2.29997125615916,4.80397640241591,4.85511646985355,3.71940550764012,7.32916637555283,35.3848877086595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.513554785824136,0.51968329191118,0.537080087002444,0.198681354781265,0.120195449519969,0,0,0.15241361331,0,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,1.33348036680969,2.06035057238894,1.60459604795908,0.505394423527595,1.01391719956096,1.50901073108861,1.49826411951812,0.89635213366817,1.14870937911227,0.952587382566147,0.695305955669133,0.578727661391115,1.23625770240992,1.03039244094078,1.02860775715625,0.887379030796687,1.1921809497366,1.0174249164263,1.31753132581463,1.35383372626682,1.09756783723664,1.8414879800649,1.08643291076689,0.561142271657738,1.06771516311757,1.0835493061312,1.63692417267876,1.54936841185966,0.964533054905707,0,0.233931608445408,1.93383948643468,0,0,0 | |phase1_expression=0,22.3344260889191,14.5599756604652,49.6041306543201,26.5474736871564,9.56911849897772,9.34450562382103,0.645616617207881,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0.42438965179803,0.0850432901510698,0.595745707205312,1.04479915655574,19.0390983124154,19.2703796096423,9.76194338995534,10.3382879078178,10.7735616342945,36.104449696711,23.1867719379136,12.1951780860418,0,0,0,12.4206196493048,6.31691652362271,7.9626048942324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286533439938757,0,0,0,0,0,0,0.449949858640699,0,0.7104801149461,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,1.40444420131752,0,0,0,0,0,0,0,0,0,0,6.96521666286266,0,0,0,0,0,0,0,0,1.23597483867187,0.289198713839823,0,0,0,0,41.0061874679869,0,0,29.8884754594052,0.359445373517761,1.79970819298022,0.254140454146129,0,0,0,0,0,0,0,0.101839363850316,0.124406970610093,0,0.420883711772948,0,0,0.180062129805349,0.150704817835715,0.136072998302656,0,0,0.517406741478031,0,0,0,0,0,0.348252166522167,0,0,0,0,0.284163499395593,0,0,0,0,0,0.154267112887378,0,0,0.233530684734339,0,0.164167464079095,0,0,0,0,0,0,92.5172592354634,55.0057178660172,0,0,2.44848176511977,10.8909103296605,14.2321948060717,19.403013863481,21.8283368310475,22.0696599330175,22.6201687920243,21.8852119245266,22.2259059315797,19.7740269903929,36.0950543290739,35.8454291857861,0,0,0,0,0,0,0,0,0.156998727841375,0.123397163921801,0,0,0,0.224862112384854,0,0,0,0,0.324270453550071,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0,0,0,1.50791283939272,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.3371317267288,0,0,0,0,0,0,0,0,0,0,0,0,0,0.469343416127421,0.21183207086382,0,0,0,0.120625849856312,0.238744688006273,0,22.1525435838687,0,0,0,0.185194527369712,0,0,0,0.169978429993855,0.839708713941948,0.138199973804424,5.72802370809068,0,0,1.51207477150522,2.29997125615916,4.80397640241591,4.85511646985355,3.71940550764012,7.32916637555283,35.3848877086595,0,0,0,0,0,0,0,0,0,0,0,0,0,0.405450430580328,0.513554785824136,0.51968329191118,0.537080087002444,0.198681354781265,0.120195449519969,0,0,0.15241361331,0,0.194915761479505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.243106717068294,0,0.367687016900028,1.33348036680969,2.06035057238894,1.60459604795908,0.505394423527595,1.01391719956096,1.50901073108861,1.49826411951812,0.89635213366817,1.14870937911227,0.952587382566147,0.695305955669133,0.578727661391115,1.23625770240992,1.03039244094078,1.02860775715625,0.887379030796687,1.1921809497366,1.0174249164263,1.31753132581463,1.35383372626682,1.09756783723664,1.8414879800649,1.08643291076689,0.561142271657738,1.06771516311757,1.0835493061312,1.63692417267876,1.54936841185966,0.964533054905707,0,0.233931608445408,1.93383948643468,0,0,0 | ||
|short_description=p1@Lrrc66 | |short_description=p1@Lrrc66 | ||
}} | }} |
Latest revision as of 05:13, 26 September 2015
Short description: | p1@Lrrc66 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Lrrc66_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 0bp_to_ENSMUST00000152215_5end |
EntrezGene: | Lrrc66 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.04e-12 | 9 |
epithelial cell of alimentary canal | 3.04e-12 | 9 |
brush border epithelial cell | 4.90e-09 | 6 |
gut absorptive cell | 4.90e-09 | 6 |
enterocyte | 4.90e-09 | 6 |
columnar/cuboidal epithelial cell | 1.40e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.89e-36 | 31 |
gastrointestinal system | 7.30e-36 | 47 |
mucosa | 3.15e-20 | 15 |
intestinal mucosa | 9.62e-18 | 13 |
wall of intestine | 9.62e-18 | 13 |
gastrointestinal system mucosa | 9.62e-18 | 13 |
organ component layer | 2.62e-12 | 24 |
epithelium of mucosa | 3.04e-12 | 9 |
gastrointestinal system epithelium | 3.04e-12 | 9 |
intestinal epithelium | 3.04e-12 | 9 |
simple columnar epithelium | 1.33e-09 | 11 |
digestive system | 1.88e-09 | 116 |
digestive tract | 1.88e-09 | 116 |
primitive gut | 1.88e-09 | 116 |
endoderm-derived structure | 4.14e-09 | 118 |
endoderm | 4.14e-09 | 118 |
presumptive endoderm | 4.14e-09 | 118 |
subdivision of digestive tract | 3.08e-08 | 114 |
small intestine | 8.15e-07 | 4 |