FFCP PHASE1:Mm9::chr2:167757883..167757900,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr2:167757883..167757900,+ to FFCP PHASE1:Mm9::chr2:167757883..167757900,+: NSchange) |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=19246 | |EntrezGene=19246 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=116 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000124039,ENSMUST00000144249_5end | |||
|cluster_id=chr2:167757883..167757900,+ | |||
|description=CAGE_peak_2_at_Ptpn1_5end | |||
|id=chr2:167757883..167757900,+ | |||
|ontology_enrichment_celltype=CL:0000219!2.60e-10!54;CL:0002320!3.45e-10!46;CL:0000134!3.45e-10!46;CL:0000988!3.58e-10!32;CL:0002032!3.58e-10!32;CL:0000037!3.58e-10!32;CL:0000566!3.58e-10!32;CL:0000837!3.58e-10!32;CL:0002031!7.26e-09!25;CL:0000738!1.72e-08!17;CL:0002087!1.72e-08!17;CL:0000838!1.63e-07!12;CL:0000084!6.56e-07!11;CL:0000827!6.56e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000219,2.59e-10,54;CL:0000988,3.42e-10,32;CL:0002032,3.42e-10,32;CL:0000037,3.42e-10,32;CL:0000837,3.42e-10,32;CL:0002320,3.44e-10,46;CL:0000134,3.44e-10,46;CL:0002031,6.91e-09,25;CL:0000738,1.72e-08,17;CL:0002087,1.72e-08,17;CL:0000838,1.63e-07,12;CL:0000084,6.55e-07,11;CL:0000827,6.55e-07,11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.83e-17!48;UBERON:0002390!3.70e-16!45;UBERON:0003061!3.70e-16!45;UBERON:0002405!8.82e-13!70;UBERON:0002384!3.45e-10!46;UBERON:0004177!8.32e-09!29;UBERON:0002371!1.69e-08!16;UBERON:0001474!2.95e-08!22;UBERON:0004765!2.95e-08!22;UBERON:0001434!2.95e-08!22;UBERON:0001004!5.66e-08!42;UBERON:0000065!6.94e-08!41;UBERON:0002204!1.81e-07!32;UBERON:0006562!4.61e-07!24;UBERON:0001557!4.61e-07!24;UBERON:0001042!4.61e-07!24;UBERON:0008814!4.61e-07!24;UBERON:0009145!4.61e-07!24;UBERON:0003408!9.01e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,1.83e-17,48;UBERON:0002405,1.83e-17,48;UBERON:0002390,3.70e-16,45;UBERON:0003061,3.70e-16,45;UBERON:0002384,3.44e-10,46;UBERON:0000077,6.79e-09,35;UBERON:0004177,8.31e-09,29;UBERON:0005057,8.31e-09,29;UBERON:0002371,1.68e-08,16;UBERON:0001474,2.94e-08,22;UBERON:0004765,2.94e-08,22;UBERON:0001434,2.94e-08,22;UBERON:0001004,5.66e-08,42;UBERON:0000065,6.94e-08,41;UBERON:0002204,1.81e-07,32;UBERON:0006562,4.61e-07,24;UBERON:0001557,4.61e-07,24;UBERON:0001042,4.61e-07,24;UBERON:0008814,4.61e-07,24;UBERON:0009145,4.61e-07,24;UBERON:0003408,9.01e-07,24 | |||
|phase1_expression=3.52327463630547,3.14077866875425,2.72999543633722,1.20985684522732,1.50268718983904,1.84667199103079,2.80335168714631,28.4071311571468,45.193179810685,50.0898086329066,6.67750076079469,5.74359544766422,28.2481204386489,28.1493695789172,14.3237197580735,13.970793449898,3.49780939064073,24.6060488979425,25.6403990842732,26.7365480632759,5.86798702042381,16.3830069481461,25.3363795464767,6.07971206614945,9.1763712426868,1.14846392823004,3.87685796543167,1.29282739611533,1.14014051673824,3.02436155711917,2.21730510655305,3.81018404075779,0.61506478758457,0,1.1554064790051,1.16364251750945,1.83752420636132,123.048299436651,98.4482534099989,64.916944252751,111.175751237862,119.532959867728,94.1890084880438,2.51793635951155,4.25783111121961,9.17733760808408,4.69434806608824,4.79655344036982,3.95435128922049,4.08302788055995,2.79972843250725,5.75010257459886,38.7577819993371,38.4441935266013,27.8957853288245,2.82985379639542,4.29800159908135,2.06268836910977,6.87875966922632,3.70293685490423,2.53532561402472,3.72728985276045,5.33576877666684,77.841325544841,91.9645717187286,94.4938552878313,28.7616106097669,24.2057532352579,4.97710139080693,5.40023753326763,6.52007380189284,3.14216082844184,2.87129103237098,5.63457676388789,7.09256485534949,5.51531271966013,2.20231761998777,3.70293280447044,3.68655679814984,5.67111037239834,6.95306091378313,4.68822033501084,1.95428099300967,1.12552522006336,3.0559649555362,4.12480019663135,4.12877874317399,4.84638559145781,5.52801211332244,7.48158445057177,12.1743085254705,1.72084775396277,11.5595126730318,3.77792234146472,0.649776417447669,0.896053774194671,3.93244376368905,5.96506129023202,4.67614808285164,6.36011234118612,1.97180787687353,6.41632387071589,2.54805239706646,7.11066703153331,5.62876706629157,3.29367825117628,3.53867111510348,5.59501010623394,38.8406825470758,5.04703272820404,4.16364784238726,2.43572382649713,1.84492397804847,3.01445281105245,2.82212897125692,2.63899841792318,5.6854842578906,4.916378135277,22.9998743506967,5.17653919831709,9.93786833071771,7.27312879702833,1.86391761218122,2.92780797011547,3.77004072264219,1.53274233125155,17.6128233023703,19.196887391789,10.9280395282836,3.74476598512057,3.66000482254901,6.91098936620754,3.65031072403781,3.3243009452943,2.0778804455956,3.40706652442291,3.36069900706044,9.45492976636707,4.0435641349388,1.68353484709179,1.82168620147785,3.21862946206862,2.70093194708024,3.31550599238573,3.26575195926374,3.84341160854549,3.37326208415024,1.81092359517311,3.01795190105979,3.40390944302075,0.175951124163949,1.09597866213787,2.22437799380478,2.78601733217733,5.76189981942242,2.9855140022774,7.72434506044558,7.46308930632674,5.96743348730745,2.48550927042602,3.28336483973535,3.06105504483725,2.60419209143731,2.95146347621106,2.93107514486019,1.39520366850245,1.3413670069981,2.80236821681207,2.63295759861569,2.95501435342371,2.26992666728396,2.92399974850665,1.3173006917463,2.54992195644706,6.51898840548794,4.21908910755066,0.660837565967596,1.58670339998127,1.49301775374664,3.25131340604614,1.54640953586512,1.21010114774006,0.889512175379481,1.52180500890047,0.949058123089023,2.14108641141214,2.26201687920243,1.59165177632921,1.16978452271472,0,1.94524244887225,1.7922714592893,2.27601481143698,3.31320686568214,1.1270773567308,3.46207257337034,1.93952487167626,3.92760591385784,2.97211724484009,3.24742325555125,1.41298855057237,2.46794327843601,3.55743152504579,2.66952169145751,2.75182593158484,4.72210436008193,4.26006254915856,2.65294875727659,3.56476192493988,4.60313819921297,8.10676133875177,6.58947391651396,5.75072826109418,4.83783231969054,6.24075346229121,4.04126204715379,1.79397413521912,2.8946611281802,11.2699446001629,1.89491411770485,2.93336957595647,2.8856664581782,3.52035372432753,6.03022526790537,6.18913466303636,9.36641509717434,6.77831119656621,6.42247599981447,6.37819074629948,8.02930242107116,12.2606337124786,8.10034728056465,48.2532108605671,44.6002660731342,2.45882136509518,4.96686143348518,1.28440471990234,1.64096361229084,2.78689407140348,2.01976741763498,2.2085575359138,3.12350995437311,4.09304455692318,2.86762557543062,2.00518806674155,1.98153571552183,4.04810701674894,2.92255857911312,3.55759000151871,10.2822821254978,3.69044221541498,2.13678724400706,2.11753047159649,5.93892442701128,3.98235415019888,2.18502572539483,2.41858845571801,1.69744571780308,2.95301892880773,0.307435147943927,2.58428293168221,3.27180356529755,1.42598951353889,2.52829406348653,4.21674434299995,1.03135543248187,9.19186935535228,3.24109969256358,4.2688365648309,3.64372959553707,4.61084607469911,4.45922044005176,3.29098041204242,6.08929898229199,3.28540391289194,2.75381692122966,3.96951116498931,10.3878339353132,6.13564821444441,5.06628569396509,6.32673423216623,5.58079059133208,2.91480836629851,2.59595422814714,23.4093106693058,6.60437977482312,12.5932278611404,4.89757988212197,10.5254555345189,13.4979122191848,26.0066997890599,32.1888340344413,30.2657942631688,2.86401185404534,1.73984796469624,2.23651413839534,1.94409613479242,1.88179466413022,3.05707589244649,2.96701562046606,2.89287095038676,3.14107130380836,1.29614973291793,4.97071450469541,5.07323644815771,3.73791365109947,2.15096037594227,4.083474955225,3.7456348808542,3.71703476079712,3.99014611395563,4.55715346953825,5.24296722128554,2.89900944991207,2.30424005006292,6.00421129193539,5.27085559754427,5.03283690107653,4.80707045017842,6.44496104402933,6.55648470778174,4.92801343031872,8.12292399460175,5.35122184725182,5.48689007915999,7.15865914471568,7.60171469770069,8.75527758926998,10.6357980985228,7.9355634265324,1.99787358036658,2.24284641523689,3.35769232728157,7.34120457322324,6.75656911624255,5.67770035228522,14.7914181564555,4.51414893631827,3.3885110557024,3.68260189205742,5.15605962095457,4.46818274093588,4.11049511862385,1.5107877947794,5.40018000185445,3.60256962579376,4.07828168085784,4.65984280576638,4.15149390336707,1.99512436700516,4.09760653809922,3.16038732188782,3.98265008993166,5.33146174505041,2.889207461421,3.7086310303001,4.1719497246936,2.02157769411038,3.29523089857312,3.39527414494937,3.7456602987953,3.64943368707755,3.84817642002609,3.33405583898152,4.75125736373908,4.05109362973781,7.82963211526283,3.23837624295674,4.80016953339582,3.01708870470874,5.24559617884106,3.77900683244054,3.95259397744389,4.39995961036718,4.93905526756486,4.73525480588117,3.80251518768413,2.80571135828869,3.79632057997357,4.72821515402705,4.50154147486658,5.88759996506671,4.62975866354739,5.74564329257276,3.04111090979031,6.44613162144895,4.01705497344571,3.97064554415128,3.2461496986859 | |phase1_expression=3.52327463630547,3.14077866875425,2.72999543633722,1.20985684522732,1.50268718983904,1.84667199103079,2.80335168714631,28.4071311571468,45.193179810685,50.0898086329066,6.67750076079469,5.74359544766422,28.2481204386489,28.1493695789172,14.3237197580735,13.970793449898,3.49780939064073,24.6060488979425,25.6403990842732,26.7365480632759,5.86798702042381,16.3830069481461,25.3363795464767,6.07971206614945,9.1763712426868,1.14846392823004,3.87685796543167,1.29282739611533,1.14014051673824,3.02436155711917,2.21730510655305,3.81018404075779,0.61506478758457,0,1.1554064790051,1.16364251750945,1.83752420636132,123.048299436651,98.4482534099989,64.916944252751,111.175751237862,119.532959867728,94.1890084880438,2.51793635951155,4.25783111121961,9.17733760808408,4.69434806608824,4.79655344036982,3.95435128922049,4.08302788055995,2.79972843250725,5.75010257459886,38.7577819993371,38.4441935266013,27.8957853288245,2.82985379639542,4.29800159908135,2.06268836910977,6.87875966922632,3.70293685490423,2.53532561402472,3.72728985276045,5.33576877666684,77.841325544841,91.9645717187286,94.4938552878313,28.7616106097669,24.2057532352579,4.97710139080693,5.40023753326763,6.52007380189284,3.14216082844184,2.87129103237098,5.63457676388789,7.09256485534949,5.51531271966013,2.20231761998777,3.70293280447044,3.68655679814984,5.67111037239834,6.95306091378313,4.68822033501084,1.95428099300967,1.12552522006336,3.0559649555362,4.12480019663135,4.12877874317399,4.84638559145781,5.52801211332244,7.48158445057177,12.1743085254705,1.72084775396277,11.5595126730318,3.77792234146472,0.649776417447669,0.896053774194671,3.93244376368905,5.96506129023202,4.67614808285164,6.36011234118612,1.97180787687353,6.41632387071589,2.54805239706646,7.11066703153331,5.62876706629157,3.29367825117628,3.53867111510348,5.59501010623394,38.8406825470758,5.04703272820404,4.16364784238726,2.43572382649713,1.84492397804847,3.01445281105245,2.82212897125692,2.63899841792318,5.6854842578906,4.916378135277,22.9998743506967,5.17653919831709,9.93786833071771,7.27312879702833,1.86391761218122,2.92780797011547,3.77004072264219,1.53274233125155,17.6128233023703,19.196887391789,10.9280395282836,3.74476598512057,3.66000482254901,6.91098936620754,3.65031072403781,3.3243009452943,2.0778804455956,3.40706652442291,3.36069900706044,9.45492976636707,4.0435641349388,1.68353484709179,1.82168620147785,3.21862946206862,2.70093194708024,3.31550599238573,3.26575195926374,3.84341160854549,3.37326208415024,1.81092359517311,3.01795190105979,3.40390944302075,0.175951124163949,1.09597866213787,2.22437799380478,2.78601733217733,5.76189981942242,2.9855140022774,7.72434506044558,7.46308930632674,5.96743348730745,2.48550927042602,3.28336483973535,3.06105504483725,2.60419209143731,2.95146347621106,2.93107514486019,1.39520366850245,1.3413670069981,2.80236821681207,2.63295759861569,2.95501435342371,2.26992666728396,2.92399974850665,1.3173006917463,2.54992195644706,6.51898840548794,4.21908910755066,0.660837565967596,1.58670339998127,1.49301775374664,3.25131340604614,1.54640953586512,1.21010114774006,0.889512175379481,1.52180500890047,0.949058123089023,2.14108641141214,2.26201687920243,1.59165177632921,1.16978452271472,0,1.94524244887225,1.7922714592893,2.27601481143698,3.31320686568214,1.1270773567308,3.46207257337034,1.93952487167626,3.92760591385784,2.97211724484009,3.24742325555125,1.41298855057237,2.46794327843601,3.55743152504579,2.66952169145751,2.75182593158484,4.72210436008193,4.26006254915856,2.65294875727659,3.56476192493988,4.60313819921297,8.10676133875177,6.58947391651396,5.75072826109418,4.83783231969054,6.24075346229121,4.04126204715379,1.79397413521912,2.8946611281802,11.2699446001629,1.89491411770485,2.93336957595647,2.8856664581782,3.52035372432753,6.03022526790537,6.18913466303636,9.36641509717434,6.77831119656621,6.42247599981447,6.37819074629948,8.02930242107116,12.2606337124786,8.10034728056465,48.2532108605671,44.6002660731342,2.45882136509518,4.96686143348518,1.28440471990234,1.64096361229084,2.78689407140348,2.01976741763498,2.2085575359138,3.12350995437311,4.09304455692318,2.86762557543062,2.00518806674155,1.98153571552183,4.04810701674894,2.92255857911312,3.55759000151871,10.2822821254978,3.69044221541498,2.13678724400706,2.11753047159649,5.93892442701128,3.98235415019888,2.18502572539483,2.41858845571801,1.69744571780308,2.95301892880773,0.307435147943927,2.58428293168221,3.27180356529755,1.42598951353889,2.52829406348653,4.21674434299995,1.03135543248187,9.19186935535228,3.24109969256358,4.2688365648309,3.64372959553707,4.61084607469911,4.45922044005176,3.29098041204242,6.08929898229199,3.28540391289194,2.75381692122966,3.96951116498931,10.3878339353132,6.13564821444441,5.06628569396509,6.32673423216623,5.58079059133208,2.91480836629851,2.59595422814714,23.4093106693058,6.60437977482312,12.5932278611404,4.89757988212197,10.5254555345189,13.4979122191848,26.0066997890599,32.1888340344413,30.2657942631688,2.86401185404534,1.73984796469624,2.23651413839534,1.94409613479242,1.88179466413022,3.05707589244649,2.96701562046606,2.89287095038676,3.14107130380836,1.29614973291793,4.97071450469541,5.07323644815771,3.73791365109947,2.15096037594227,4.083474955225,3.7456348808542,3.71703476079712,3.99014611395563,4.55715346953825,5.24296722128554,2.89900944991207,2.30424005006292,6.00421129193539,5.27085559754427,5.03283690107653,4.80707045017842,6.44496104402933,6.55648470778174,4.92801343031872,8.12292399460175,5.35122184725182,5.48689007915999,7.15865914471568,7.60171469770069,8.75527758926998,10.6357980985228,7.9355634265324,1.99787358036658,2.24284641523689,3.35769232728157,7.34120457322324,6.75656911624255,5.67770035228522,14.7914181564555,4.51414893631827,3.3885110557024,3.68260189205742,5.15605962095457,4.46818274093588,4.11049511862385,1.5107877947794,5.40018000185445,3.60256962579376,4.07828168085784,4.65984280576638,4.15149390336707,1.99512436700516,4.09760653809922,3.16038732188782,3.98265008993166,5.33146174505041,2.889207461421,3.7086310303001,4.1719497246936,2.02157769411038,3.29523089857312,3.39527414494937,3.7456602987953,3.64943368707755,3.84817642002609,3.33405583898152,4.75125736373908,4.05109362973781,7.82963211526283,3.23837624295674,4.80016953339582,3.01708870470874,5.24559617884106,3.77900683244054,3.95259397744389,4.39995961036718,4.93905526756486,4.73525480588117,3.80251518768413,2.80571135828869,3.79632057997357,4.72821515402705,4.50154147486658,5.88759996506671,4.62975866354739,5.74564329257276,3.04111090979031,6.44613162144895,4.01705497344571,3.97064554415128,3.2461496986859 | ||
|short_description=p2@Ptpn1 | |||
}} | }} |
Latest revision as of 05:14, 26 September 2015
Short description: | p2@Ptpn1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ptpn1_5end |
Coexpression cluster: | MCL_coexpression_mm9:116 |
Association with transcript: | 0bp_to_ENSMUST00000124039, ENSMUST00000144249_5end |
EntrezGene: | Ptpn1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
motile cell | 2.59e-10 | 54 |
hematopoietic cell | 3.42e-10 | 32 |
hematopoietic oligopotent progenitor cell | 3.42e-10 | 32 |
hematopoietic stem cell | 3.42e-10 | 32 |
hematopoietic multipotent progenitor cell | 3.42e-10 | 32 |
connective tissue cell | 3.44e-10 | 46 |
mesenchymal cell | 3.44e-10 | 46 |
hematopoietic lineage restricted progenitor cell | 6.91e-09 | 25 |
leukocyte | 1.72e-08 | 17 |
nongranular leukocyte | 1.72e-08 | 17 |
lymphoid lineage restricted progenitor cell | 1.63e-07 | 12 |
T cell | 6.55e-07 | 11 |
pro-T cell | 6.55e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 1.83e-17 | 48 |
immune system | 1.83e-17 | 48 |
hematopoietic system | 3.70e-16 | 45 |
blood island | 3.70e-16 | 45 |
connective tissue | 3.44e-10 | 46 |
mixed endoderm/mesoderm-derived structure | 6.79e-09 | 35 |
hemopoietic organ | 8.31e-09 | 29 |
immune organ | 8.31e-09 | 29 |
bone marrow | 1.68e-08 | 16 |
bone element | 2.94e-08 | 22 |
skeletal element | 2.94e-08 | 22 |
skeletal system | 2.94e-08 | 22 |
respiratory system | 5.66e-08 | 42 |
respiratory tract | 6.94e-08 | 41 |
musculoskeletal system | 1.81e-07 | 32 |
pharynx | 4.61e-07 | 24 |
upper respiratory tract | 4.61e-07 | 24 |
chordate pharynx | 4.61e-07 | 24 |
pharyngeal arch system | 4.61e-07 | 24 |
pharyngeal region of foregut | 4.61e-07 | 24 |
gland of gut | 9.01e-07 | 24 |